Author results

2D73
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CRYSTAL STRUCTURE ANALYSIS OF SUSB
Descriptor:alpha-glucosidase SusB, CALCIUM ION
Authors:Kitamura, M., Yao, M.
Deposit date:2005-11-15
Release date:2007-02-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional analysis of a glycoside hydrolase family 97 enzyme from Bacteroides thetaiotaomicron.
J.Biol.Chem., 283, 2008
2ZQ0
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CRYSTAL STRUCTURE OF SUSB COMPLEXED WITH ACARBOSE
Descriptor:Alpha-glucosidase (Alpha-glucosidase SusB), ALPHA-ACARBOSE, CALCIUM ION
Authors:Yao, M., Tanaka, I., Kitamura, M.
Deposit date:2008-07-31
Release date:2008-10-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional analysis of a glycoside hydrolase family 97 enzyme from Bacteroides thetaiotaomicron.
J.Biol.Chem., 283, 2008
1WE5
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CRYSTAL STRUCTURE OF ALPHA-XYLOSIDASE FROM ESCHERICHIA COLI
Descriptor:Putative family 31 glucosidase yicI, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
Authors:Ose, T., Kitamura, M., Okuyama, M., Mori, H., Kimura, A., Watanabe, N., Yao, M., Tanaka, I.
Deposit date:2004-05-24
Release date:2005-02-15
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Alpha-Xylosidase from Escherichia coli
TO BE PUBLISHED
3A24
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CRYSTAL STRUCTURE OF BT1871 RETAINING GLYCOSIDASE
Descriptor:alpha-galactosidase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION
Authors:Okuyama, M., Kitamura, M., Hondoh, H., Tanaka, I., Yao, M.
Deposit date:2009-04-28
Release date:2009-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Catalytic mechanism of retaining alpha-galactosidase belonging to glycoside hydrolase family 97.
J.Mol.Biol., 392, 2009
2CVC
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CRYSTAL STRUCTURE OF HIGH-MOLECULAR WEIGHT CYTOCHROME C FROM DESULFOVIBRIO VULGARIS (HILDENBOROUGH)
Descriptor:High-molecular-weight cytochrome c precursor, PROTOPORPHYRIN IX CONTAINING FE
Authors:Suto, K., Sato, M., Shibata, N., Kitamura, M., Morimoto, Y., Takayama, Y., Ozawa, K., Akutsu, H., Higuchi, Y., Yasuoka, N.
Deposit date:2005-06-02
Release date:2006-06-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of High-Molecular Weight Cytochrome c
To be Published
2E84
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CRYSTAL STRUCTURE OF HIGH-MOLECULAR WEIGHT CYTOCHROME C FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F) IN THE PRESENCE OF ZINC ION
Descriptor:High-molecular-weight cytochrome c, ZINC ION, SODIUM ION, ...
Authors:Shibata, N., Suto, K., Sato, M., Morimoto, Y., Kitamura, M., Higuchi, Y.
Deposit date:2007-01-17
Release date:2008-01-15
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F)
To be Published
5B37
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CRYSTAL STRUCTURE OF L-TRYPTOPHAN DEHYDROGENASE FROM NOSTOC PUNCTIFORME
Descriptor:Tryptophan dehydrogenase
Authors:Wakamatsu, T., Sakuraba, H., Kitamura, M., Hakumai, Y., Ohnishi, K., Ashiuchi, M., Ohshima, T.
Deposit date:2016-02-11
Release date:2016-11-23
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Insights into l-Tryptophan Dehydrogenase from a Photoautotrophic Cyanobacterium, Nostoc punctiforme.
Appl. Environ. Microbiol., 83, 2017
1FLM
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DIMER OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:PROTEIN (FMN-BINDING PROTEIN), FLAVIN MONONUCLEOTIDE
Authors:Suto, K., Kawagoe, K., Shibata, N., Morimoto, K., Higuchi, Y., Kitamura, M., Nakaya, T., Yasuoka, N.
Deposit date:1999-03-10
Release date:2000-03-06
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:How do the x-ray structure and the NMR structure of FMN-binding protein differ?
Acta Crystallogr.,Sect.D, 56, 2000
3A6Q
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E13T MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE, CHLORIDE ION
Authors:Nakanishi, T., Haruyama, Y., Inoue, H., Kitamura, M.
Deposit date:2009-09-08
Release date:2010-09-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Effects of the disappearance of one charge on ultrafast fluorescence dynamics of the FMN binding protein.
J.Phys.Chem.B, 114, 2010
3A6R
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E13Q MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE, CHLORIDE ION
Authors:Nakanishi, T., Haruyama, Y., Inoue, H., Kitamura, M.
Deposit date:2009-09-08
Release date:2010-09-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Effects of the disappearance of one charge on ultrafast fluorescence dynamics of the FMN binding protein.
J.Phys.Chem.B, 114, 2010
3AMF
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E13R MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE, CHLORIDE ION
Authors:Sato, S., Nakanishi, T., Inoue, H., Kitamura, M.
Deposit date:2010-08-19
Release date:2011-10-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of E13R mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3AWH
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E13K MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE, CHLORIDE ION
Authors:Sato, S., Nakanishi, T., Inoue, H., Kitamura, M.
Deposit date:2011-03-22
Release date:2012-04-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of E13K mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3VQT
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CRYSTAL STRUCTURE ANALYSIS OF THE TRANSLATION FACTOR RF3
Descriptor:Peptide chain release factor 3, GUANOSINE-5'-DIPHOSPHATE
Authors:Kihira, K., Shomura, Y., Shibata, N., Kitamura, M., Higuchi, Y.
Deposit date:2012-03-30
Release date:2012-09-05
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of the translation factor RF3 (release factor 3)
Febs Lett., 586, 2012
3VR1
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CRYSTAL STRUCTURE ANALYSIS OF THE TRANSLATION FACTOR RF3
Descriptor:Peptide chain release factor 3, GUANOSINE-5',3'-TETRAPHOSPHATE
Authors:Kihira, K., Shomura, Y., Shibata, N., Kitamura, M., Higuchi, Y.
Deposit date:2012-04-03
Release date:2012-09-05
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure analysis of the translation factor RF3 (release factor 3)
Febs Lett., 586, 2012
3VY2
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N33D MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE
Authors:Takagi, R., Nakanishi, T., Kitamura, M.
Deposit date:2012-09-21
Release date:2013-09-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of N33D mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3VY5
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N33Q MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE, CHLORIDE ION
Authors:Takagi, R., Nakanishi, T., Kitamura, M.
Deposit date:2012-09-21
Release date:2013-09-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of N33Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3VYA
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W32Y MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE
Authors:Takagi, R., Nakanishi, T., Kitamura, M.
Deposit date:2012-09-22
Release date:2013-09-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3W8Q
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STRUCTURE OF THE HUMAN MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1 (MEK1)
Descriptor:Dual specificity mitogen-activated protein kinase kinase 1, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Nakae, S., Kitamura, M., Shirai, T., Tada, T.
Deposit date:2013-03-20
Release date:2014-03-26
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the human mitogen-activated protein kinase kinase 1 (MEK1) in "DFG-Asp Out" conformation
To be Published
5B3K
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C101A MUTANT OF FLAVODOXIN FROM PSEUDOMONAS AERUGINOSA
Descriptor:Uncharacterized protein PA3435, SULFATE ION
Authors:Okada, D., Nakanishi, T., Kitamura, M.
Deposit date:2016-03-03
Release date:2017-03-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:C101A mutant of Flavodoxin from Pseudomonas aeruginosa
To Be Published
5B3L
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C101S MUTANT OF FLAVODOXIN FROM PSEUDOMONAS AERUGINOSA
Descriptor:Uncharacterized protein PA3435, SULFATE ION
Authors:Okada, D., Nakanishi, T., Kitamura, M.
Deposit date:2016-03-04
Release date:2017-03-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:C101S mutant of Flavodoxin from Pseudomonas aeruginosa
To Be Published
1WLI
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L122Y MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE
Authors:Shibata, N., Higuchi, Y.
Deposit date:2004-06-28
Release date:2005-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis.
J.Biochem., 141, 2007
1WLK
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L122E MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE
Authors:Shibata, N., Higuchi, Y.
Deposit date:2004-06-28
Release date:2005-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis.
J.Biochem., 141, 2007
3A20
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L122K MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE
Authors:Shibata, N., Higuchi, Y.
Deposit date:2009-04-27
Release date:2009-05-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis
J.Biochem., 141, 2007
1AXJ
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FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F), NMR, 20 STRUCTURES
Descriptor:FMN-BINDING PROTEIN, FLAVIN MONONUCLEOTIDE
Authors:Liepinsh, E., Otting, G.
Deposit date:1997-10-16
Release date:1998-01-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Pathway of chymotrypsin evolution suggested by the structure of the FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Nat.Struct.Biol., 4, 1997
2E83
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T31V MUTANT OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor:FMN-binding protein, FLAVIN MONONUCLEOTIDE
Authors:Shibata, N., Higuchi, Y.
Deposit date:2007-01-17
Release date:2008-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure of T31V mutant of FMN-binding protein from Desulfovibrio vulgaris Miyazaki F
To be Published