Author results

2E8F
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CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (AQ_1549) FROM AQUIFEX AEOLICUS VF5 (OXIDISED FORM)
Descriptor:Hypothetical protein Aq_1549
Authors:Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5
To be Published
2EBE
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CRYSTAL STRUCTURE OF LYS11 TO MET MUTANT OF HYPOTHETICAL PROTEIN FROM THERMUS THERMOPHILUS
Descriptor:Hypothetical protein TTHA0061
Authors:Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-08
Release date:2007-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Lys11 to Met mutant of hypothetical protein from Thermus thermophilus
To be Published
2EBG
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CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN FROM THERMUS THERMOPHILUS
Descriptor:Hypothetical protein TTHA0061
Authors:Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-08
Release date:2007-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a hypothetical protein from thermus thermophilus
To be Published
2EG1
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THE CRYSTAL STRUCTURE OF PII PROTEIN
Descriptor:Nitrogen regulatory protein P-II, SULFATE ION, CHLORIDE ION
Authors:Sakai, H., Shinkai, A., Kitamura, Y., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-27
Release date:2008-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of PII protein
To be Published
2EG3
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CRYSTAL STRUCTURE OF PROBABLE THIOSULFATE SULFURTRANSFERASE
Descriptor:Probable thiosulfate sulfurtransferase, ZINC ION, SULFATE ION
Authors:Sakai, H., Ebihara, A., Kitamura, Y., Shinkai, A., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-27
Release date:2008-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Probable Thiosulfate Sulfurtransferase
To be Published
2EGJ
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CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN(AQ1494) FROM AQUIFEX AEOLICUS
Descriptor:Hypothetical protein aq_1494
Authors:Kumarevel, T.S., Niwa, H., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-01
Release date:2007-09-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Hypothetical Protein(AQ1494) from Aquifex aeolicus
To be Published
2EGR
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CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN(AQ1494) FROM AQUIFEX AEOLICUS
Descriptor:Hypothetical protein aq_1494
Authors:Kumarevel, T.S., Niwa, H., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-02
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Hypothetical Protein(AQ1494) from Aquifex aeolicus
To be Published
2EQA
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CRYSTAL STRUCTURE OF THE HYPOTHETICAL SUA5 PROTEIN FROM SULFOLOBUS TOKODAII
Descriptor:Hypothetical protein ST1526, MAGNESIUM ION, ADENOSINE MONOPHOSPHATE
Authors:Agari, Y., Shinkai, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2008-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of a hypothetical Sua5 protein from Sulfolobus tokodaii strain 7
Proteins, 70, 2008
2GGO
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CRYSTAL STRUCTURE OF GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE FROM SULFOLOBUS TOKODAII
Descriptor:401aa long hypothetical glucose-1-phosphate thymidylyltransferase
Authors:Rajakannan, V., Mizushima, T., Suzuki, A., Masui, R., Kuramitsu, S., Yamane, T.
Deposit date:2006-03-24
Release date:2007-03-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of glucose-1-phosphate thymidylyltransferase from Sulfolobus tokodaii
To be published
2P8T
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HYPOTHETICAL PROTEIN PH0730 FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:Hypothetical protein PH0730
Authors:Chen, L., Zhao, M., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Zhu, J., Swindell, J.T., Fu, Z.-Q., Chrzas, J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-23
Release date:2007-04-24
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Hypothetical protein PH0730 from Pyrococcus horikoshii OT3
To be Published
2PBP
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CRYSTAL STRUCTURE OF ENOYL-COA HYDRATES SUBUNIT I (GK_2039) FROM GEOBACILLUS KAUSTOPHILUS HTA426
Descriptor:Enoyl-CoA hydratase subunit I
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki, R.C., Sekar, K., Agari, Y., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of ENOYL-CoA hydrates subunit I (gk_2039) from geobacillus kaustophilus HTA426
To be Published
2PG0
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CRYSTAL STRUCTURE OF ACYL-COA DEHYDROGENASE FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Acyl-CoA dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Chen, L., Chen, L.-Q., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Zhao, M., Li, Y., Fu, Z.-Q., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-05-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of acyl-CoA dehydrogenase from G. kaustophilus
To be Published
2YW2
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CRYSTAL STRUCTURE OF GAR SYNTHETASE FROM AQUIFEX AEOLICUS IN COMPLEX WITH ATP
Descriptor:Phosphoribosylamine--glycine ligase, PHOSPHATE ION, ADENOSINE-5'-TRIPHOSPHATE
Authors:Baba, S., Kanagawa, M., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-19
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YYH
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CRYSTAL STRUCTURE OF NUDIX FAMILY PROTEIN FROM AQUIFEX AEOLICUS
Descriptor:8-OXO-dGTPase domain
Authors:Nakagawa, N., Kishishita, S., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-30
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Nudix family protein from Aquifex aeolicus
To be Published
2YZK
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CRYSTAL STRUCTURE OF OROTATE PHOSPHORIBOSYLTRANSFERASE FROM AEROPYRUM PERNIX
Descriptor:Orotate phosphoribosyltransferase, PHOSPHATE ION
Authors:Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of orotate phosphoribosyltransferase from Aeropyrum pernix
To be Published
2YZT
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CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative uncharacterized protein TTHA1756
Authors:Ebihara, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of uncharacterized protein TTHA1756 from Thermus thermophilus HB8: Structural variety in UPF0150 family proteins.
Proteins, 71, 2008
2ZCA
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CRYSTAL STRUCTURE OF TTHB189, A CRISPR-ASSOCIATED PROTEIN, CSE2 FAMILY FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative uncharacterized protein TTHB189
Authors:Agari, Y., Shinkai, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-08
Release date:2008-10-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of a CRISPR-associated protein, Cse2, from Thermus thermophilus HB8
Proteins, 73, 2008
3ADR
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THE FIRST CRYSTAL STRUCTURE OF AN ARCHAEAL METALLO-BETA-LACTAMASE SUPERFAMILY PROTEIN; ST1585 FROM SULFOLOBUS TOKODAII
Descriptor:Putative uncharacterized protein ST1585, ZINC ION, 1,2-ETHANEDIOL, ...
Authors:Shimada, A., Ishikawa, H., Nakagawa, N., Kuramitsu, S., Masui, R.
Deposit date:2010-01-28
Release date:2010-04-21
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The first crystal structure of an archaeal metallo-beta-lactamase superfamily protein; ST1585 from Sulfolobus tokodaii
Proteins, 78, 2010
3CM0
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CRYSTAL STRUCTURE OF ADENYLATE KINASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Adenylate kinase
Authors:Nakagawa, N., Kondo, N., Masui, R., Matsuda, Z., Iwamoto, I., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-03-20
Release date:2008-09-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of adenylate kinase from Thermus thermophilus HB8
To be Published
3I7U
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CRYSTAL STRUCTURE OF AP4A HYDROLASE (AQ_158) FROM AQUIFEX AEOLICUS VF5
Descriptor:AP4A hydrolase, CHLORIDE ION, 1,2-ETHANEDIOL, ...
Authors:Jeyakanthan, J., Kanaujia, S.P., Nakagawa, N., Sekar, K., Kuramitsu, S., Shinkai, A., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-07-09
Release date:2009-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Free and ATP-bound structures of Ap(4)A hydrolase from Aquifex aeolicus V5
Acta Crystallogr.,Sect.D, 66, 2010
3VPB
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ARGX FROM SULFOLOBUS TOKODAII COMPLEXED WITH LYSW/GLU/ADP/MG/ZN/SULFATE
Descriptor:Putative acetylornithine deacetylase, Alpha-aminoadipate carrier protein lysW, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Tomita, T., Ouchi, T., Kuzuyama, T., Nishiyama, M.
Deposit date:2012-02-29
Release date:2013-02-27
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus
Nat.Chem.Biol., 9, 2013
4E1B
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RE-REFINEMENT OF PDB ENTRY 2EQA - SUA5 PROTEIN FROM SULFOLOBUS TOKODAII WITH BOUND THREONYLCARBAMOYLADENYLATE
Descriptor:YrdC/Sua5 family protein, MAGNESIUM ION, threonylcarbamoyladenylate
Authors:Parthier, C., Goerlich, S., Jaenecke, F., Breithaupt, C., Braeuer, U., Fandrich, U., Clausnitzer, D., Wehmeier, U.F., Boettcher, C., Scheel, D., Stubbs, M.T.
Deposit date:2012-03-06
Release date:2012-03-14
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Angew.Chem.Int.Ed.Engl., 51, 2012
2YVW
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CRYSTAL STRUCTURE OF UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE FROM AQUIFEX AEOLICUS VF5
Descriptor:UDP-N-acetylglucosamine 1-carboxyvinyltransferase, PHOSPHATE ION, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
Authors:Kitamuta, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-16
Release date:2007-10-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5
To be Published
3SWG
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AQUIFEX AEOLICUS MURA IN COMPLEX WITH UDP-N-ACETYLMURAMIC ACID AND COVALENT ADDUCT OF PEP WITH CYS124
Descriptor:UDP-N-acetylglucosamine 1-carboxyvinyltransferase, TETRAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, ...
Authors:Zhu, J.-Y., Schonbrunn, E.
Deposit date:2011-07-13
Release date:2012-03-14
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Functional Consequence of Covalent Reaction of Phosphoenolpyruvate with UDP-N-acetylglucosamine 1-Carboxyvinyltransferase (MurA).
J.Biol.Chem., 287, 2012
1WUR
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STRUCTURE OF GTP CYCLOHYDROLASE I COMPLEXED WITH 8-OXO-DGTP
Descriptor:GTP cyclohydrolase I, ZINC ION, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
Authors:Tanaka, Y., Nakagawa, N., Masui, R., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-12-08
Release date:2005-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative
J.Biochem.(Tokyo), 138, 2005