Author results

3AAL
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CRYSTAL STRUCTURE OF ENDONUCLEASE IV FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Probable endonuclease 4, CACODYLATE ION, FE (III) ION, ...
Authors:Asano, R., Ishikawa, H., Nakane, S., Nakagawa, N., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-11-20
Release date:2010-12-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011
3AKD
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CRYSTAL STRUCTURE OF CMP KINASE IN COMPLEX WITH CDP FROM THERMUS THERMOPHILUS HB8
Descriptor:Cytidylate kinase, CYTIDINE-5'-DIPHOSPHATE
Authors:Mega, R., Nakagawa, N., Kuramitsu, S., Masui, R.
Deposit date:2010-07-12
Release date:2011-07-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the tertiary complex of CMP kinase with a phosphoryl group acceptor and a donor from Thermus thermophilus HB8
To be Published
2E8B
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CRYSTAL STRUCTURE OF THE PUTATIVE PROTEIN (AQ1419) FROM AQUIFEX AEOLICUS VF5
Descriptor:Probable molybdopterin-guanine dinucleotide biosynthesis protein A
Authors:Kumarevel, T.S., Malathy sony, S.M., Ponnuswamy, M.N., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal structure of the putative protein (Aq1419) from Aquifex aeolicus VF5
To be Published
2YZQ
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CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM PYROCOCCUS HORIKOSHII
Descriptor:Putative uncharacterized protein PH1780, S-ADENOSYLMETHIONINE
Authors:Kanagawa, M., Minami, Y., Watanabe, N., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii
To be Published
2IS8
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CRYSTAL STRUCTURE OF THE MOLYBDOPTERIN BIOSYNTHESIS ENZYME MOAB (TTHA0341) FROM THERMUS THEROMOPHILUS HB8
Descriptor:Molybdopterin biosynthesis enzyme, MoaB, FORMIC ACID
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Baba, S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-16
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of the molybdopterin biosynthesis enzyme MoaB (TTHA0341) from thermus theromophilus HB8
To be Published
2Z0X
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CRYSTAL STRUCTURE OF PROX-CYSSA COMPLEX FROM T. THERMOPHILUS
Descriptor:Putative uncharacterized protein TTHA1699, 5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of ProX-CysSA complex from T. thermophilus
To be Published
3MCH
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CRYSTAL STRUCTURE OF THE MOLYBDOPTERIN BIOSYNTHESIS ENZYME MOAB (TTHA0341) FROM THERMUS THEROMOPHILUS HB8
Descriptor:Molybdopterin biosynthesis enzyme, MoaB, 1,2-ETHANEDIOL
Authors:Jeyakanthan, J., Kanaujia, S.P., Sekar, K., Baba, S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-03-29
Release date:2011-01-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structures, dynamics and functional implications of molybdenum-cofactor biosynthesis protein MogA from two thermophilic organisms
Acta Crystallogr.,Sect.F, 67, 2011
1ODE
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CRYSTAL ANALYSIS OF CHORISMATE MUTASE FROM THERMUS THERMOPHILUS.
Descriptor:CHORISMATE MUTASE
Authors:Inagaki, E., Miyano, M., Tahirov, T.H.
Deposit date:2003-02-18
Release date:2003-02-27
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Crystal Structure of Chorismate Mutase from Thermus Thermophilus
To be Published
1UEB
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CRYSTAL STRUCTURE OF TRANSLATION ELONGATION FACTOR P FROM THERMUS THERMOPHILUS HB8
Descriptor:elongation factor P
Authors:Hanawa-Suetsugu, K., Sekine, S., Sakai, H., Hori-Takemoto, C., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-09
Release date:2004-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of elongation factor P from Thermus thermophilus HB8
Proc.Natl.Acad.Sci.USA, 101, 2004
1UI9
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CRYSTAL ANALYSIS OF CHORISMATE MUTASE FROM THERMUS THERMOPHILUS
Descriptor:chorismate mutase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL
Authors:Inagaki, E., Kuramitsu, S., Yokoyama, S., Miyano, M., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-15
Release date:2003-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structure of chorismate mutase from thermus thermophilus
To be Published
1V8Y
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE OF E86Q MUTANT, COMPLEXED WITH ADP-RIBOSE AND ZN
Descriptor:ADP-ribose pyrophosphatase, ZINC ION, ADENOSINE-5-DIPHOSPHORIBOSE
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-15
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1WUB
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CRYSTAL STRUCTURE OF THE POLYISOPRENOID-BINDING PROTEIN, TT1927B, FROM THERMUS THERMOPHILUS HB8
Descriptor:conserved hypothetical protein TT1927b, (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE
Authors:Handa, N., Idaka, M., Terada, T., Hamana, H., Ishizuka, Y., Park, S.-Y., Tame, J.R.H., Doi-Katayama, Y., Hirota, H., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-12-03
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8
Protein Sci., 14, 2005
2CVL
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CRYSTAL STRUCTURE OF TTHA0137 FROM THERMUS THERMOPHILUS HB8
Descriptor:protein translation initiation inhibitor
Authors:Wang, H., Murayama, K., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-08
Release date:2005-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of TTHA0137 from Thermus Thermophilus HB8
TO BE PUBLISHED
2CWC
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CRYSTAL STRUCTURE OF ADP-RIBOSYLGLYCOHYDROLASE-RELATED PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:ADP-ribosylglycohydrolase
Authors:Ebihara, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-18
Release date:2005-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of ADP-ribosylglycohydrolase-related protein from Thermus thermophilus HB8
To be Published
2CWL
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CRYSTAL STRUCTURE OF MANGANESE-FREE FORM OF PSEUDOCATALASE FROM THERMUS THERMOPHILUS HB8
Descriptor:manganese-free pseudocatalase
Authors:Ebihara, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-21
Release date:2005-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and functional analysis of pseudocatalase from Thermus thermophilus HB8
To be Published
2D59
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HYPOTHETICAL PROTEIN FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:hypothetical protein PH1109
Authors:Hiyama, T.B., Sekine, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-31
Release date:2006-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins.
J.STRUCT.FUNCT.GENOM., 7, 2006
2YYV
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CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM THERMOTOGA MARITIMA
Descriptor:Probable 2-phosphosulfolactate phosphatase
Authors:Nakagawa, N., Nakamura, Y., Bessho, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-02
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermotoga maritima
To be Published
2Z09
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CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Universal stress protein family, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Iino, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2Z3V
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CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Universal stress protein family, S-1,2-PROPANEDIOL
Authors:Iino, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-06-06
Release date:2007-12-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2ZBT
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CRYSTAL STRUCTURE OF PYRIDOXINE BIOSYNTHESIS PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Pyridoxal biosynthesis lyase pdxS, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Manzoku, M., Ebihara, A., Fujimoto, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-29
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of pyridoxine biosynthesis protein from Thermus thermophilus HB8
To be Published
3A0J
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CRYSTAL STRUCTURE OF COLD SHOCK PROTEIN 1 FROM THERMUS THERMOPHILUS HB8
Descriptor:Cold shock protein
Authors:Miyazaki, T., Nakagawa, N., Kuramitsu, S., Masui, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-03-19
Release date:2010-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Biological Action of Cold Shock Protein 1 from Thermus thermophilus HB8
To be Published
3A3U
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CRYSTAL STRUCTURE OF MQND (TTHA1568), A MENAQUINONE BIOSYNTHETIC ENZYME FROM THERMUS THERMOPHILUS HB8
Descriptor:Menaquinone biosynthetic enzyme, POTASSIUM ION, L(+)-TARTARIC ACID, ...
Authors:Arai, R., Nishino, A., Nagano, K., Uchikubo-Kamo, T., Katsura, K., Nishimoto, M., Toyama, M., Terada, T., Kuramitsu, S., Murayama, K., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-06-20
Release date:2009-07-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8.
J.Struct.Biol., 168, 2009
3AKC
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CRYSTAL STRUCTURE OF CMP KINASE IN COMPLEX WITH CDP AND ADP FROM THERMUS THERMOPHILUS HB8
Descriptor:Cytidylate kinase, CYTIDINE-5'-DIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Mega, R., Nakagawa, N., Kuramitsu, S., Masui, R.
Deposit date:2010-07-12
Release date:2011-07-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structure of the tertiary complex of CMP kinase with a phosphoryl group acceptor and a donor from Thermus thermophilus HB8
To be Published
3W90
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CRYSTAL STRUCTURE OF CMP KINASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Cytidylate kinase
Authors:Nakagawa, N., Mega, R., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2013-03-22
Release date:2013-09-25
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of CMP kinase: insights into initial substrate recognition and reaction mechanisms
To be Published
1V8W
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE OF E82Q MUTANT, COMPLEXED WITH SO4 AND ZN
Descriptor:ADP-ribose pyrophosphatase, SULFATE ION, ZINC ION
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-15
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004