Author results

1WYU
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CRYSTAL STRUCTURE OF GLYCINE DECARBOXYLASE (P-PROTEIN) OF THE GLYCINE CLEAVAGE SYSTEM, IN HOLO FORM
Descriptor:glycine dehydrogenase (decarboxylating) subunit 1, glycine dehydrogenase subunit 2 (P-protein), PYRIDOXAL-5'-PHOSPHATE
Authors:Nakai, T., Nakagawa, N., Maoka, N., Masui, R., Kuramitsu, S., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-02-17
Release date:2005-04-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of P-protein of the glycine cleavage system: implications for nonketotic hyperglycinemia
Embo J., 24, 2005
2DDG
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CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE IN COMPLEX WITH AP:G CONTAINING DNA
Descriptor:5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*GP*GP*CP*AP*AP*CP*A)-3', uracil-DNA glycosylase, ...
Authors:Kosaka, H., Nakagawa, N., Masui, R., Hoseki, J., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-01-28
Release date:2007-02-13
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
2DGB
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STRUCTURE OF THERMUS THERMOPHILUS PURS IN THE P21 FORM
Descriptor:hypothetical protein PurS
Authors:Yanai, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-10
Release date:2006-09-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Thermus thermophilus PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway
To be published
2E8C
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CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (AQ_1549) FROM AQUIFEX AEOLICUS VF5
Descriptor:Hypothetical protein Aq_1549
Authors:Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5
To be Published
2EA9
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CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN JW2626 FROM E.COLI
Descriptor:Hypothetical protein yfjZ
Authors:Okazaki, N., Kuramitsu, S., Yamamoto, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-31
Release date:2007-07-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a hypothetical protein JW2626 from E.coli
To be Published
2EBD
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CRYSTAL STRUCTURE OF 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III FROM AQUIFEX AEOLICUS VF5
Descriptor:3-oxoacyl-[acyl-carrier-protein] synthase 3
Authors:Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-08
Release date:2007-08-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of 3-oxoacyl-[acyl-carrier-protein] synthase III from Aquifex aeolicus VF5
To be Published
2EF7
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CRYSTAL STRUCTURE OF ST2348, A HYPOTHETICAL PROTEIN WITH CBS DOMAINS FROM SULFOLOBUS TOKODAII STRAIN7
Descriptor:Hypothetical protein ST2348
Authors:Agari, Y., Karthe, P., Kumarevel, T., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-21
Release date:2007-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of ST2348, a CBS domain protein, from hyperthermophilic archaeon Sulfolobus tokodaii
Biochem.Biophys.Res.Commun., 375, 2008
2EIS
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X-RAY STRUCTURE OF ACYL-COA HYDROLASE-LIKE PROTEIN, TT1379, FROM THERMUS THERMOPHILUS HB8
Descriptor:Hypothetical protein TTHB207, COENZYME A
Authors:Kamitori, S., Yoshida, H., Satoh, S., Iino, H., Ebihara, A., Chen, L., Fu, Z.-Q., Chrzas, J., Wang, B.-C., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-13
Release date:2008-03-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8
To be Published
2PCQ
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CRYSTAL STRUCTURE OF PUTATIVE DIHYDRODIPICOLINATE SYNTHASE (TTHA0737) FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative dihydrodipicolinate synthase, POTASSIUM ION, GLYCEROL
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Kitamura, Y., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of putative dihydrodipicolinate synthase (TTHA0737) from Thermus Thermophilus HB8
To be Published
2PKP
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CRYSTAL STRUCTURE OF 3-ISOPROPYLMALATE DEHYDRATASE (LEUD)FROM METHHANOCALDOCOCCUS JANNASCHII DSM2661 (MJ1271)
Descriptor:Homoaconitase small subunit, ZINC ION, DI(HYDROXYETHYL)ETHER
Authors:Jeyakanthan, J., Gayathri, D.R., Velmurugan, D., Agari, Y., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-18
Release date:2008-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate specificity determinants of the methanogen homoaconitase enzyme: structure and function of the small subunit
Biochemistry, 49, 2010
2PT5
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CRYSTAL STRUCTURE OF SHIKIMATE KINASE (AQ_2177) FROM AQUIFEX AEOLICUS VF5
Descriptor:Shikimate kinase, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER
Authors:Jeyakanthan, J., Nithya, N., Shimada, A., Velmurugan, D., Ebihara, A., Shinkai, A., Kuramitsu, S., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-08
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure Of Shikimate Kinase (aq_2177) From Aquifex Aeolicus vf5
To be Published
2YWB
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CRYSTAL STRUCTURE OF GMP SYNTHETASE FROM THERMUS THERMOPHILUS
Descriptor:GMP synthase [glutamine-hydrolyzing]
Authors:Baba, S., Kanagawa, M., Yanai, H., Ishii, T., Kuramitsu, S., Yokoyama, S., Sampei, G., Kawai, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of GMP synthetase from Thermus thermophilus
To be Published
2Z07
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CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative uncharacterized protein TTHA0978
Authors:Iino, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2Z0G
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THE CRYSTAL STRUCTURE OF PII PROTEIN
Descriptor:Nitrogen regulatory protein P-II, PHOSPHATE ION, CHLORIDE ION
Authors:Sakai, H., Shinkai, A., Kitamura, Y., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of PII protein
To be Published
2ZBU
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CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM THERMOTOGA MARITIMA
Descriptor:Uncharacterized conserved protein, ADENOSINE
Authors:Ebihara, A., Fujimoto, Y., Kagawa, W., Fujikawa, N., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-30
Release date:2007-11-13
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermotoga maritima
To be Published
2ZBW
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CRYSTAL STRUCTURE OF THIOREDOXIN REDUCTASE-LIKE PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Thioredoxin reductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Ebihara, A., Manzoku, M., Fujimoto, Y., Kitamura, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-30
Release date:2007-11-13
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8
To be Published
2ZIG
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CRYSTAL STRUCTURE OF TTHA0409, PUTATIVE DNA MODIFICATION METHYLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative modification methylase
Authors:Morita, R., Ishikawa, H., Nakagawa, N., Masui, R., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-02-15
Release date:2008-07-29
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8
Proteins, 73, 2008
2ZO4
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CRYSTAL STRUCTURE OF METALLO-BETA-LACTAMASE FAMILY PROTEIN TTHA1429 FROM THERMUS THERMOPHILUS HB8
Descriptor:Metallo-beta-lactamase family protein, ZINC ION
Authors:Yamamura, A., Nagata, K., Agari, Y., Ebihara, A., Nakagawa, N., Yokoyama, S., Kuramitsu, S., Tanokura, M.
Deposit date:2008-05-05
Release date:2009-03-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of TTHA1429, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8.
Proteins, 73, 2008
2ZOP
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X-RAY CRYSTAL STRUCTURE OF A CRISPR-ASSOCIATED CMR5 FAMILY PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative uncharacterized protein TTHB164, SULFATE ION
Authors:Sakamoto, K., Agari, Y., Shinkai, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-05-28
Release date:2009-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray crystal structure of a CRISPR-associated RAMP superfamily protein, Cmr5, from Thermus thermophilus HB8
Proteins, 75, 2009
3AAI
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X-RAY CRYSTAL STRUCTURE OF CSOR FROM THERMUS THERMOPHILUS HB8
Descriptor:Copper homeostasis operon regulatory protein
Authors:Sakamoto, K., Agari, Y., Shinkai, A., Kuramitsu, S.
Deposit date:2009-11-17
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional characterization of the transcriptional repressor CsoR from Thermus thermophilus HB8
Microbiology, 156, 2010
3CQ3
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STRUCTURE OF THE DTDP-4-KETO-L-RHAMNOSE REDUCTASE RELATED PROTEIN (OTHER FORM) FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative uncharacterized protein TTHB138, MAGNESIUM ION, GLYCEROL, ...
Authors:Jeyakanthan, J., Kanaujia, S.P., Sekar, K., Satoh, S., Kitamura, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-02
Release date:2009-04-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8
To be Published
3HJN
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CRYSTAL STRUCTURE OF THYMIDYLATE KINASE IN COMPLEX WITH DTDP AND ADP FROM THERMOTOGA MARITIMA
Descriptor:Thymidylate kinase, ADENOSINE-5'-DIPHOSPHATE, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Yoshikawa, S., Nakagawa, N., Shirouzu, M., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-05-22
Release date:2009-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of thymidylate kinase in complex with dTDP and ADP from Thermotoga maritima
To be Published
3HPE
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CRYSTAL STRUCTURE OF YCEI (HP1286) FROM HELICOBACTER PYLORI
Descriptor:Conserved hypothetical secreted protein, (13Z)-docos-13-enamide
Authors:Sisinni, L., Cendron, L., Zanotti, G.
Deposit date:2009-06-04
Release date:2010-04-14
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Helicobacter pylori acidic stress response factor HP1286 is a YceI homolog with new binding specificity.
Febs J., 277, 2010
1WWP
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CRYSTAL STRUCTURE OF TTK003001694 FROM THERMUS THERMOPHILUS HB8
Descriptor:hypothetical protein TTHA0636
Authors:Wang, H., Murayama, K., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-01-12
Release date:2005-07-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of ttk003001694 from Thermus Thermophilus HB8
TO BE PUBLISHED
3KB6
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CRYSTAL STRUCTURE OF D-LACTATE DEHYDROGENASE FROM AQUIFEX AEOLICUS COMPLEXED WITH NAD AND LACTIC ACID
Descriptor:D-lactate dehydrogenase, PROPANOIC ACID, LACTIC ACID, ...
Authors:Antonyuk, S.V., Strange, R.W., Ellis, M.J., Bessho, Y., Kuramitsu, S., Yokoyama, S., Hasnain, S.S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-10-20
Release date:2009-11-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structure of D-lactate dehydrogenase from Aquifex aeolicus complexed with NAD(+) and lactic acid (or pyruvate).
Acta Crystallogr.,Sect.F, 65, 2009