Author results

1DI4
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ROLE OF AMINO ACID RESIDUES AT TURNS IN THE CONFORMATIONAL STABILITY AND FOLDING OF HUMAN LYSOZYME
Descriptor:LYSOZYME C, SODIUM ION
Authors:Takano, K., Yamagata, Y., Yutani, K.
Deposit date:1999-11-29
Release date:1999-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of amino acid residues at turns in the conformational stability and folding of human lysozyme.
Biochemistry, 39, 2000
1GD7
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CRYSTAL STRUCTURE OF A BIFUNCTIONAL PROTEIN (CSAA) WITH EXPORT-RELATED CHAPERONE AND TRNA-BINDING ACTIVITIES.
Descriptor:CSAA PROTEIN
Authors:Shibata, T., Inoue, Y., Vassylyev, D.G., Kawaguchi, S., Yokoyama, S., Muller, J., Linde, D., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2000-09-22
Release date:2001-09-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the ttCsaA protein: an export-related chaperone from Thermus thermophilus.
EMBO J., 20, 2001
1GEQ
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ENTROPIC STABILIZATION OF THE TRYPTOPHAN SYNTHASE A-SUBUNIT FROM A HYPERTHERMOPHILE, PYROCOCCUS FURIOSUS: X-RAY ANALYSIS AND CALORIMETRY
Descriptor:TRYPTOPHAN SYNTHASE ALPHA-SUBUNIT
Authors:Yutani, K., Yamagata, Y.
Deposit date:2000-11-21
Release date:2000-12-13
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Entropic stabilization of the tryptophan synthase alpha-subunit from a hyperthermophile, Pyrococcus furiosus. X-ray analysis and calorimetry.
J.Biol.Chem., 276, 2001
1IUL
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THE STRUCTURE OF CELL-FREE ID.343 FROM THERMUS THERMOPHILUS
Descriptor:hypothetical protein TT1466
Authors:Wada, T., Shirouzu, M., Park, S.-Y., Tame, J.R., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-05
Release date:2003-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a conserved CoA-binding protein synthesized by a cell-free system.
Acta Crystallogr.,Sect.D, 59, 2003
1IZ9
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CRYSTAL STRUCTURE OF MALATE DEHYDROGENASE FROM THERMUS THERMOPHILUS HB8
Descriptor:MALATE DEHYDROGENASE
Authors:Hirose, R., Hasegawa, T., Yamano, A., Kuramitsu, S., Hamada, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-10-01
Release date:2002-10-16
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Malate Dehydrogenase from Thermus themrophilus HB8
To be published
1J3M
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CRYSTAL STRUCTURE OF THE CONSERVED HYPOTHETICAL PROTEIN TT1751 FROM THERMUS THERMOPHILUS HB8
Descriptor:the conserved hypothetical protein TT1751, SULFITE ION
Authors:Kishishita, S., Terada, T., Shirouzu, M., Kuramitsu, S., Park, S.-Y., Tame, R.H., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-02-05
Release date:2004-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a conserved hypothetical protein TT1751 from Thermus thermophilus HB8
Proteins, 57, 2004
1SPA
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ROLE OF ASP222 IN THE CATALYTIC MECHANISM OF ESCHERICHIA COLI ASPARTATE AMINOTRANSFERASE: THE AMINO ACID RESIDUE WHICH ENHANCES THE FUNCTION OF THE ENZYME-BOUND COENZYME PYRIDOXAL 5'-PHOSPHATE
Descriptor:ASPARTATE AMINOTRANSFERASE, N-METHYL-4-DEOXY-4-AMINO-PYRIDOXAL-5-PHOSPHATE
Authors:Hinoue, Y., Yano, T., Metzler, D.E., Miyahara, I., Hirotsu, K., Kagamiyama, H.
Deposit date:1993-01-26
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of Asp222 in the catalytic mechanism of Escherichia coli aspartate aminotransferase: the amino acid residue which enhances the function of the enzyme-bound coenzyme pyridoxal 5'-phosphate.
Biochemistry, 31, 1992
1UAN
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CRYSTAL STRUCTURE OF THE CONSERVED PROTEIN TT1542 FROM THERMUS THERMOPHILUS HB8
Descriptor:hypothetical protein TT1542
Authors:Handa, N., Terada, T., Tame, J.R.H., Park, S.-Y., Kinoshita, K., Ota, M., Nakamura, H., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-03-12
Release date:2003-08-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
PROTEIN SCI., 12, 2003
1UC8
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CRYSTAL STRUCTURE OF A LYSINE BIOSYNTHESIS ENZYME, LYSX, FROM THERMUS THERMOPHILUS HB8
Descriptor:lysine biosynthesis enzyme
Authors:Sakai, H., Vassylyeva, M.N., Matsuura, T., Sekine, S., Nishiyama, M., Terada, T., Shirouzu, M., Kuramitsu, S., Vassylyev, D.G., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-04-09
Release date:2003-09-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a Lysine Biosynthesis Enzyme, LysX, from Thermus thermophilus HB8
J.Mol.Biol., 332, 2003
1UJ5
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CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RIBOSE-5-PHOSPHATE ISOMERASE COMPLEXED WITH RIBOSE-5-PHOSPHATE
Descriptor:ribose 5-phosphate isomerase, RIBULOSE-5-PHOSPHATE, CHLORIDE ION
Authors:Hamada, K., Ago, H., Sugahara, M., Nodake, Y., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-26
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
1ULU
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CRYSTAL STRUCTURE OF TT0143 FROM THERMUS THERMOPHILUS HB8
Descriptor:enoyl-acyl carrier protein reductase
Authors:Ago, H., Hamada, K., Ida, K., Kanda, H., Sugahara, M., Yamamoto, M., Nodake, Y., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-16
Release date:2004-11-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of tt0143 from Thermus thermophilus HB8
To be Published
1V9O
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CRYSTAL STRUCTURE OF TT1020 FROM THERMUS THERMOPHILUS HB8
Descriptor:NITROGEN REGULATORY PROTEIN PII, ADENOSINE-5'-DIPHOSPHATE
Authors:Wang, H., Sakai, H., Takemoto-Hori, C., Kaminishi, T., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-27
Release date:2005-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the signal transducing protein GlnK from Thermus thermophilus HB8.
J.Struct.Biol., 149, 2005
1VC8
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CRYSTAL STRUCTURE OF A T.THERMOPHILUS HB8 AP6A HYDROLASE NDX1-AP6A COMPLEX
Descriptor:Ndx1, ADENOSINE-5'-PENTAPHOSPHATE
Authors:Iwai, T., Nakagawa, N., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-05
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Nudix Protein Ndx1 from Thermus thermophilus HB8 in binary complex with diadenosine hexaphosphate
To be Published
1VDH
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STRUCTURE-BASED FUNCTIONAL IDENTIFICATION OF A NOVEL HEME-BINDING PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:muconolactone isomerase-like protein
Authors:Ebihara, A., Okamoto, A., Kousumi, Y., Yamamoto, H., Masui, R., Ueyama, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-22
Release date:2004-09-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8.
J.STRUCT.FUNCT.GENOM., 6, 2005
1WCX
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CRYSTAL STRUCTURE OF MUTANT UROPORPHYRINOGEN III SYNTHASE FROM AN EXTREMELY THERMOPHILIC BACTERIUM THERMUS THERMOPHILUS HB8 (L75M/I193M/L248M, SEMET DERIVATIVE, FORM-1 CRYSTAL)
Descriptor:Uroporphyrinogen III Synthase, GLYCEROL
Authors:Mizohata, E., Matsuura, T., Murayama, K., Sakai, H., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-06
Release date:2005-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Uroporphyrinogen III Synthase from Thermus thermophilus HB8
To be Published
1WD5
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CRYSTAL STRUCTURE OF TT1426 FROM THERMUS THERMOPHILUS HB8
Descriptor:hypothetical protein TT1426, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
Authors:Shibata, R., Kukimoto-Niino, M., Murayama, K., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-11
Release date:2004-11-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a predicted phosphoribosyltransferase (TT1426) from Thermus thermophilus HB8 at 2.01 A resolution
Protein Sci., 14, 2005
1WDJ
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CRYSTAL STRUCTURE OF TT1808 FROM THERMUS THERMOPHILUS HB8
Descriptor:hypothetical protein TT1808
Authors:Idaka, M., Wada, T., Murayama, K., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-17
Release date:2004-11-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure Of TT1808 From Thermus Thermophilus HB8
To be published
1WGB
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CRYSTAL STRUCTURE OF A PROBABLE FLAVOPROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:probable flavoprotein
Authors:Imagawa, T., Tsuge, H., Utsunomiya, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a probable flavoprotein from Thermus thermophilus HB8
To be Published
1WIW
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CRYSTAL STRUCTURE OF A GLUCOSE-6-PHOSPHATE ISOMERASE LIKE PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Glucose-6-phosphate isomerase like protein
Authors:Yoshihiro, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a glucose-6-phosphate isomerase like protein from thermus thermophilus HB8
To be Published
1WIY
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CRYSTAL STRUCTURE ANALYSIS OF A 6-COORDINATED CYTOCHOROME P450 FROM THERMUS THERMOPHILUS HB8
Descriptor:Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kousumi, Y., Nakagawa, N., Kaneko, M., Yamamoto, H., Masui, R., Kuramitsu, S., Ueyama, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure Analysis of Cytochrome P450 from Thermus thermophilus HB8
To be Published
1WKJ
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CRYSTAL STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE FROM THERMUS THERMOPHILUS HB8
Descriptor:nucleoside diphosphate kinase
Authors:Takeishi, S., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-31
Release date:2005-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8
To be Published
1WP4
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STRUCTURE OF TT368 PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:3-hydroxyisobutyrate dehydrogenase, SULFATE ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Lokanath, N.K., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-08-30
Release date:2005-08-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Novel NADP-dependent 3-Hydroxyisobutyrate Dehydrogenase from Thermus thermophilus HB8
J.Mol.Biol., 352, 2005
1WUQ
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STRUCTURE OF GTP CYCLOHYDROLASE I COMPLEXED WITH 8-OXO-GTP
Descriptor:GTP cyclohydrolase I, ZINC ION, 8-OXO-GUANOSINE-5'-TRIPHOSPHATE
Authors:Tanaka, Y., Nakagawa, N., Masui, R., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-12-08
Release date:2005-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative
J.Biochem.(Tokyo), 138, 2005
1WV9
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CRYSTAL STRUCTURE OF RHODANESE HOMOLOG TT1651 FROM AN EXTREMELY THERMOPHILIC BACTERIUM THERMUS THERMOPHILUS HB8
Descriptor:Rhodanese Homolog TT1651
Authors:Mizohata, E., Hattori, M., Tatsuguchi, A., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-12-12
Release date:2005-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the single-domain rhodanese homologue TTHA0613 from Thermus thermophilus HB8
Proteins, 64, 2006
2CB1
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CRYSTAL STRUCTURE OF O-ACTETYL HOMOSERINE SULFHYDRYLASE FROM THERMUS THERMOPHILUS HB8,OAH2.
Descriptor:O-ACETYL HOMOSERINE SULFHYDRYLASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Imagawa, T., Utsunomiya, H., Tsuge, H., Ebihara, A., Kanagawa, M., Nakagawa, N., Kuroishi, C., Agari, Y., Kuramitsu, S., Yokoyama, S.
Deposit date:2005-12-28
Release date:2007-01-03
Last modified:2015-12-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of O-Acetyl Homoserine Sulfhydrylase
To be Published