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3IWT
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STRUCTURE OF HYPOTHETICAL MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN B FROM SULFOLOBUS TOKODAII
Descriptor:178aa long hypothetical molybdenum cofactor biosynthesis protein B, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Antonyuk, S.V., Ellis, M.J., Strange, R.W., Hasnain, S.S., Bessho, Y., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-09-03
Release date:2009-09-29
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of hypothetical Mo-cofactor biosynthesis protein B (ST2315) from Sulfolobus tokodaii
Acta Crystallogr.,Sect.F, 65, 2009
3JQJ
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CRYSTAL STRUCTURE OF THE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C (TTHA1789) FROM THERMUS THEROMOPHILUS HB8
Descriptor:Molybdenum cofactor biosynthesis protein C, PHOSPHATE ION, R-1,2-PROPANEDIOL, ...
Authors:Kanaujia, S.P., Jeyakanthan, J., Nakagawa, N., Sekar, K., Baba, S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-09-07
Release date:2010-06-30
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of apo and GTP-bound molybdenum cofactor biosynthesis protein MoaC from Thermus thermophilus HB8
Acta Crystallogr.,Sect.D, 66, 2010
3MCJ
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CRYSTAL STRUCTURE OF MOLYBDENUM COFACTOR BIOSYNTHESIS (AQ_061) OTHER FORM FROM AQUIFEX AEOLICUS VF5
Descriptor:Molybdenum cofactor biosynthesis MOG, 1,2-ETHANEDIOL
Authors:Jeyakanthan, J., Kanaujia, S.P., Sekar, K., Agari, Y., Ebihara, A., Kuramitsu, S., Shinkai, A., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-03-29
Release date:2011-01-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures, dynamics and functional implications of molybdenum-cofactor biosynthesis protein MogA from two thermophilic organisms
Acta Crystallogr.,Sect.F, 67, 2011
2PH3
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CRYSTAL STRUCTURE OF 3-OXOACYL-[ACYL CARRIER PROTEIN] REDUCTASE TTHA0415 FROM THERMUS THERMOPHILUS
Descriptor:3-oxoacyl-[acyl carrier protein] reductase
Authors:Swindell II, J.T., Chen, L., Zhu, J., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Fu, Z.-Q., Chrzas, J., Rose, J.P., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-10
Release date:2007-05-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of 3-oxoacyl-[acyl carrier protein] reductase TTHA0415 from Thermus thermophilus
To be Published
3W34
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TERNARY COMPLEX OF THERMUS THERMOPHILUS HB8 URIDINE-CYTIDINE KINASE WITH SUBSTRATES
Descriptor:Uridine kinase, 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Tomoike, F., Nakagawa, N., Masui, R., Kuramitsu, S.
Deposit date:2012-12-10
Release date:2013-12-11
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural and Biochemical Studies on the Reaction Mechanism of Uridine-Cytidine Kinase
Protein J., 34, 2015
2P5Y
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CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS HB8 UDP-GLUCOSE 4-EPIMERASE COMPLEX WITH NAD
Descriptor:UDP-glucose 4-epimerase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Fu, Z.-Q., Chen, L., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Zhu, J., Swindell, J.T., Chrzas, J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-16
Release date:2007-04-17
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD
To be Published
3B02
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CRYSTAL STRUCTURE OF TTHB099, A TRANSCRIPTIONAL REGULATOR CRP FAMILY FROM THERMUS THERMOPHILUS HB8
Descriptor:Transcriptional regulator, Crp family
Authors:Agari, Y., Kuramitsu, S., Shinkai, A., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-06-03
Release date:2011-06-15
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:X-ray crystal structure of TTHB099, a CRP/FNR superfamily transcriptional regulator from Thermus thermophilus HB8, reveals a DNA-binding protein with no required allosteric effector molecule
Proteins, 80, 2012
3U6U
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CRYSTAL STRUCTURE OF THE PUTATIVE ACETYLGLUTAMATE KINASE FROM THERMUS THERMOPHILUS
Descriptor:Putative acetylglutamate kinase, SULFATE ION
Authors:Karthe, P., Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-10-13
Release date:2011-11-16
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The structure of first dimeric archaeal N-acetyl glutamate kinase reveals an intermediate conformation of the enzyme in the catalytic cycle
To be Published
2ZGI
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CRYSTAL STRUCTURE OF PUTATIVE 4-AMINO-4-DEOXYCHORISMATE LYASE
Descriptor:Putative 4-amino-4-deoxychorismate lyase, SULFATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Padmanabhan, B., Bessho, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-01-22
Release date:2008-07-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure of putative 4-amino-4-deoxychorismate lyase from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 65, 2009
2CW5
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CRYSTAL STRUCTURE OF A CONSERVED HYPOTHETICAL PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Bacterial fluorinating enzyme homolog
Authors:Ebihara, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-16
Release date:2005-12-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of a conserved hypothetical protein from Thermus thermophilus HB8
To be Published
2CXI
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CRYSTAL STRUCTURE OF AN N-TERMINAL FRAGMENT OF THE PHENYLALANYL-TRNA SYNTHETASE BETA-SUBUNIT FROM PYROCOCCUS HORIKOSHII
Descriptor:Phenylalanyl-tRNA synthetase beta chain
Authors:Sasaki, H., Sekine, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-29
Release date:2006-09-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural and mutational studies of the amino acid-editing domain from archaeal/eukaryal phenylalanyl-tRNA synthetase
Proc.Natl.Acad.Sci.Usa, 103, 2006
2DEM
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CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE IN COMPLEX WITH AP:A CONTAINING DNA
Descriptor:5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*AP*GP*CP*AP*AP*CP*A)-3', uracil-DNA glycosylase, ...
Authors:Kosaka, H., Nakagawa, N., Masui, R., Hoseki, J., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-13
Release date:2007-04-24
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
2QQ3
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CRYSTAL STRUCTURE OF ENOYL-COA HYDRATES SUBUNIT I (GK_2039) OTHER FORM FROM GEOBACILLUS KAUSTOPHILUS HTA426
Descriptor:Enoyl-CoA hydratase subunit I, 1,2-ETHANEDIOL
Authors:Jeyakanthan, J., Kanaujia, S.P., Sekar, K., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-07-26
Release date:2008-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure Of Enoyl-CoA Hydrates Subunit I (gk_2039) Other Form From Geobacillus Kaustophilus HTA426
To be Published
3ANP
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CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS FADR, A TETR FAMILLY TRANSCRIPTIONAL REPRESSOR, IN COMPLEX WITH LAUROYL-COA.
Descriptor:Transcriptional repressor, TetR family, DODECYL-COA, ...
Authors:Agari, Y., Agari, K., Sakamoto, K., Kuramitsu, S., Shinkai, A.
Deposit date:2010-09-06
Release date:2011-03-09
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:TetR-family transcriptional repressor Thermus thermophilus FadR controls fatty acid degradation.
Microbiology, 157, 2011
3AYT
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TTHB071 PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative uncharacterized protein TTHB071, ZINC ION
Authors:Nakane, S., Wakamatsu, T., Fukui, K., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-05-17
Release date:2011-10-19
Last modified:2014-01-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress
J.Biol.Chem., 286, 2011
3I7V
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CRYSTAL STRUCTURE OF AP4A HYDROLASE COMPLEXED WITH AP4A (ATP) (AQ_158) FROM AQUIFEX AEOLICUS VF5
Descriptor:AP4A hydrolase, ADENOSINE-5'-TRIPHOSPHATE, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, ...
Authors:Jeyakanthan, J., Kanaujia, S.P., Nakagawa, N., Sekar, K., Kuramitsu, S., Shinkai, A., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-07-09
Release date:2009-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Free and ATP-bound structures of Ap(4)A hydrolase from Aquifex aeolicus V5
Acta Crystallogr.,Sect.D, 66, 2010
3OPF
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CRYSTAL STRUCTURE OF TTHA0988 IN SPACE GROUP P212121
Descriptor:Putative uncharacterized protein TTHA0988, GLYCEROL, SULFATE ION
Authors:Jacques, D.A., Kuramitsu, S., Yokoyama, S., Trewhella, J., Guss, J.M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-09-01
Release date:2011-02-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The structure of TTHA0988 from Thermus thermophilus, a KipI-KipA homologue incorrectly annotated as an allophanate hydrolase
Acta Crystallogr.,Sect.D, 67, 2011
3VPD
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LYSX FROM THERMUS THERMOPHILUS COMPLEXED WITH AMP-PNP
Descriptor:Ribosomal protein S6 modification protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, BUTANOIC ACID, ...
Authors:Tomita, T., Ouchi, T., Kuzuyama, T., Nishiyama, M.
Deposit date:2012-02-29
Release date:2013-02-27
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus.
Nat.Chem.Biol., 9, 2013
2CWA
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CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA BINDING PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Single-strand binding protein, NITRATE ION
Authors:Satoh, S., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-17
Release date:2005-12-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structure Of The Single-stranded DNA Binding Protein From Thermus Thermophilus HB8
To be Published
2PBR
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CRYSTAL STRUCTURE OF THYMIDYLATE KINASE (AQ_969) FROM AQUIFEX AEOLICUS VF5
Descriptor:Thymidylate kinase, SULFATE ION
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Nakagawa, N., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
To be Published
1V8V
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CRYSTAL STRUCTURE ANALYSIS OF THE ADP-RIBOSE PYROPHOSPHATASE OF E86Q MUTANT, COMPLEXED WITH ADP-RIBOSE AND MG
Descriptor:ADP-ribose pyrophosphatase, MAGNESIUM ION, ADENOSINE-5-DIPHOSPHORIBOSE
Authors:Yoshiba, S., Ooga, T., Nakagawa, N., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-15
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metal
J.Biol.Chem., 279, 2004
1X56
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CRYSTAL STRUCTURE OF ASPARAGINYL-TRNA SYNTHETASE FROM PYROCOCCUS HORIKOSHII
Descriptor:Asparaginyl-tRNA synthetase
Authors:Iwasaki, W., Sekine, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-15
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
2D5Y
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ASPARTATE AMINOTRANSFERASE MUTANT MC WITH ISOVALERIC ACID
Descriptor:Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, ISOVALERIC ACID
Authors:Tanaka, Y., Nakagawa, N., Tada, H., Yano, T., Masui, R., Kuramitsu, S.
Deposit date:2005-11-08
Release date:2006-11-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2P3E
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CRYSTAL STRUCTURE OF AQ1208 FROM AQUIFEX AEOLICUS
Descriptor:Diaminopimelate decarboxylase
Authors:Zhu, J., Swindell II, J.T., Chen, L., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Fu, Z.-Q., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-08
Release date:2007-05-01
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:To be Published
To be Published
1CKH
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T70V MUTANT HUMAN LYSOZYME
Descriptor:PROTEIN (LYSOZYME)
Authors:Takano, K., Yamagata, Y., Funahashi, J., Yutani, K.
Deposit date:1999-04-22
Release date:1999-04-30
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999