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7W3G
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BU of 7w3g by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED2.0_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3J
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BU of 7w3j by Molmil
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SC_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W38
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BU of 7w38 by Molmil
Structure of USP14-bound human 26S proteasome in state EA2.0_UBL
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3A
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BU of 7w3a by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED4_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W37
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BU of 7w37 by Molmil
Structure of USP14-bound human 26S proteasome in state EA1_UBL
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3B
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BU of 7w3b by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED5_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3I
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BU of 7w3i by Molmil
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SB_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-18
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3H
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BU of 7w3h by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED2.1_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3M
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BU of 7w3m by Molmil
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SD5_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-18
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3U
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BU of 7w3u by Molmil
USP34 catalytic domain in complex with UbPA
Descriptor: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 34, ZINC ION, ...
Authors:Xu, G.L, Ming, Z.H.
Deposit date:2021-11-26
Release date:2022-06-01
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Structural Insights into the Catalytic Mechanism and Ubiquitin Recognition of USP34.
J.Mol.Biol., 434, 2022
7W3R
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BU of 7w3r by Molmil
USP34 catalytic domain
Descriptor: Ubiquitin carboxyl-terminal hydrolase 34, ZINC ION
Authors:Xu, G.L, Ming, Z.H.
Deposit date:2021-11-26
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Insights into the Catalytic Mechanism and Ubiquitin Recognition of USP34.
J.Mol.Biol., 434, 2022
3HGM
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BU of 3hgm by Molmil
Universal Stress Protein TeaD from the TRAP transporter TeaABC of Halomonas elongata
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Universal Stress Protein TeaD
Authors:Schweikhard, E.S, Kuhlmann, S.I, Ziegler, C.M.
Deposit date:2009-05-14
Release date:2010-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of the universal stress protein TeaD and its role in regulating the ectoine transporter TeaABC of Halomonas elongata DSM 2581(T)
Biochemistry, 49, 2010
5XVE
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BU of 5xve by Molmil
Crystal structure of human USP2 C276S mutant in complex with ubiquitin
Descriptor: Ubiquitin carboxyl-terminal hydrolase 2, Ubiquitin-40S ribosomal protein S27a, ZINC ION
Authors:Chou, C.Y, Tang, H.C.
Deposit date:2017-06-27
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:6-Thioguanine is a noncompetitive and slow binding inhibitor of human deubiquitinating protease USP2
Sci Rep, 8, 2018
8ITP
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BU of 8itp by Molmil
Crystal structure of USP47 catalytic domain complex with ubiquitin
Descriptor: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 47, ZINC ION
Authors:Kim, E.E, Shin, S.C.
Deposit date:2023-03-22
Release date:2024-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional characterization of USP47 reveals a hot spot for inhibitor design
Commun Biol, 6, 2023
6AQR
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BU of 6aqr by Molmil
SAGA DUB module Ubp8(C146A)/Sgf11/Sus1/Sgf73 bound to monoubiquitin
Descriptor: Polyubiquitin-C, SAGA-associated factor 11, SAGA-associated factor 73, ...
Authors:Morrow, M.E, Morgan, M.T, Wolberger, C.
Deposit date:2017-08-21
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Active site alanine mutations convert deubiquitinases into high-affinity ubiquitin-binding proteins.
EMBO Rep., 19, 2018
7AY1
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BU of 7ay1 by Molmil
Cryo-EM structure of USP1-UAF1 bound to mono-ubiquitinated FANCD2, and FANCI
Descriptor: DNA (61-MER), Fanconi anemia group D2 protein, Fanconi anemia group I protein, ...
Authors:Rennie, M.L, Arkinson, C, Walden, H.
Deposit date:2020-11-10
Release date:2021-03-24
Last modified:2022-07-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of FANCD2 deubiquitination by USP1-UAF1.
Nat.Struct.Mol.Biol., 28, 2021
4MEL
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BU of 4mel by Molmil
Crystal Structure of the human USP11 DUSP-UBL domains
Descriptor: Ubiquitin carboxyl-terminal hydrolase 11
Authors:Harper, S, Gratton, H.E, Cornaciu, I, Oberer, M, Scott, D.J, Emsley, J, Dreveny, I.
Deposit date:2013-08-27
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.899 Å)
Cite:Structure and Catalytic Regulatory Function of Ubiquitin Specific Protease 11 N-Terminal and Ubiquitin-like Domains.
Biochemistry, 53, 2014
4MEM
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BU of 4mem by Molmil
Crystal Structure of the rat USP11 DUSP-UBL domains
Descriptor: Ubiquitin carboxyl-terminal hydrolase 11
Authors:Harper, S, Gratton, H.E, Cornaciu, I, Oberer, M, Scott, D.J, Emsley, J, Dreveny, I.
Deposit date:2013-08-27
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structure and Catalytic Regulatory Function of Ubiquitin Specific Protease 11 N-Terminal and Ubiquitin-like Domains.
Biochemistry, 53, 2014
5K19
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BU of 5k19 by Molmil
Crystal structure of WD repeat-containing protein 20
Descriptor: GLYCEROL, SULFATE ION, WD repeat-containing protein 20
Authors:Li, H, D'Andrea, A.D, Zheng, N.
Deposit date:2016-05-17
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20.
Mol.Cell, 63, 2016
6H4K
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BU of 6h4k by Molmil
Structure of the Usp25 C-terminal domain
Descriptor: CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase 25
Authors:Klemm, T.A, Sauer, F, Kisker, C.
Deposit date:2018-07-21
Release date:2019-03-27
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Differential Oligomerization of the Deubiquitinases USP25 and USP28 Regulates Their Activities.
Mol.Cell, 74, 2019
7ZH3
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BU of 7zh3 by Molmil
USP1 bound to ubiquitin conjugated to FANCD2 (focused refinement)
Descriptor: Ubiquitin carboxyl-terminal hydrolase 1, Ubiquitin-60S ribosomal protein L40, ZINC ION
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-04-05
Release date:2022-10-12
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
7ZH4
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BU of 7zh4 by Molmil
USP1 bound to ML323 and ubiquitin conjugated to FANCD2 (focused refinement)
Descriptor: 5-methyl-2-(2-propan-2-ylphenyl)-~{N}-[[4-(1,2,3-triazol-1-yl)phenyl]methyl]pyrimidin-4-amine, Ubiquitin carboxyl-terminal hydrolase 1, Ubiquitin-60S ribosomal protein L40, ...
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-04-05
Release date:2022-10-12
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
8A9J
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BU of 8a9j by Molmil
Cryo-EM structure of USP1-UAF1 bound to FANCI and mono-ubiquitinated FANCD2 without ML323 (consensus reconstruction)
Descriptor: DNA (61-MER), Fanconi anemia group D2 protein, Fanconi anemia group I protein, ...
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-06-28
Release date:2022-10-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
8A9K
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BU of 8a9k by Molmil
Cryo-EM structure of USP1-UAF1 bound to FANCI and mono-ubiquitinated FANCD2 with ML323 (consensus reconstruction)
Descriptor: 5-methyl-2-(2-propan-2-ylphenyl)-~{N}-[[4-(1,2,3-triazol-1-yl)phenyl]methyl]pyrimidin-4-amine, DNA (61-MER), Fanconi anemia group D2 protein, ...
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-06-28
Release date:2022-10-12
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
5TXK
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BU of 5txk by Molmil
CRYSTAL STRUCTURE OF USP35 C450S IN COMPLEX WITH UBIQUITIN
Descriptor: 1,2-ETHANEDIOL, Polyubiquitin-B, SULFATE ION, ...
Authors:Bader, G, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2016-11-17
Release date:2018-05-09
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Expansion of DUB functionality generated by alternative isoforms - USP35, a case study.
J. Cell. Sci., 131, 2018

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