1Y52
| structure of insect cell (Baculovirus) expressed AVR4 (C122S)-biotin complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin-related protein 4/5, BIOTIN | Authors: | Eisenberg-Domovich, Y, Hytonen, V.P, Wilchek, M, Bayer, E.A, Kulomaa, M.S, Livnah, O. | Deposit date: | 2004-12-02 | Release date: | 2005-05-24 | Last modified: | 2024-01-03 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | High-resolution crystal structure of an avidin-related protein: insight into high-affinity biotin binding and protein stability. Acta Crystallogr.,Sect.D, 61, 2005
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1VYO
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1WBI
| AVR2 | Descriptor: | AVIDIN-RELATED PROTEIN 2, BIOTIN, GLYCEROL, ... | Authors: | Airenne, T.T, Hytonen, V.P, Maatta, J.H, Kidron, H, Halling, K.K, Horha, J, Kulomaa, T, Nyholm, T.K.M, Johnson, M.S, Salminen, T.A, Kulomaa, M.S. | Deposit date: | 2004-11-01 | Release date: | 2005-10-12 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Avidin Related Protein 2 Shows Unique Structural and Functional Features Among the Avidin Protein Family. Bmc Biotechnol., 5, 2005
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2BC3
| T7-tagged full-length streptavidin | Descriptor: | GLYCEROL, SULFATE ION, Streptavidin | Authors: | Stenkamp, R.E, Le Trong, I, Ward, T.R, Humbert, N. | Deposit date: | 2005-10-18 | Release date: | 2005-10-25 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.54 Å) | Cite: | Crystallographic Analysis of a Full-length Streptavidin with Its C-terminal Polypeptide Bound in the Biotin Binding Site. J.Mol.Biol., 356, 2006
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2F01
| Epi-biotin complex with core streptavidin | Descriptor: | BIOTIN, EPI-BIOTIN, GLYCEROL, ... | Authors: | Le Trong, I, Aubert, D.G, Thomas, N.R, Stenkamp, R.E. | Deposit date: | 2005-11-10 | Release date: | 2005-11-29 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (0.85 Å) | Cite: | The high-resolution structure of (+)-epi-biotin bound to streptavidin. Acta Crystallogr.,Sect.D, 62, 2006
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2FHL
| avidin related protein (AVR4)-BNA complex | Descriptor: | 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, Avidin-related protein 4/5, FORMIC ACID | Authors: | Livnah, O, Prizant, M. | Deposit date: | 2005-12-26 | Release date: | 2006-03-21 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (1.05 Å) | Cite: | Factors dictating the pseudocatalytic efficiency of avidins J.Mol.Biol., 358, 2006
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2FHN
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2GH7
| Epi-biotin complex with core streptavidin | Descriptor: | BIOTIN, EPI-BIOTIN, GLYCEROL, ... | Authors: | Le Trong, I, Aubert, D.G.L, Thomas, N.R, Stenkamp, R.E. | Deposit date: | 2006-03-26 | Release date: | 2006-04-18 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1 Å) | Cite: | The high-resolution structure of (+)-epi-biotin bound to streptavidin. Acta Crystallogr.,Sect.D, 62, 2006
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2A8G
| Structure of Avidin in complex with the ligand deoxyguanosine | Descriptor: | 2'-DEOXY-GUANOSINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin | Authors: | Conners, R, Hooley, E, Thomas, S, Brady, R.L. | Deposit date: | 2005-07-08 | Release date: | 2006-05-23 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (1.99 Å) | Cite: | Recognition of oxidatively modified bases within the biotin-binding site of avidin. J.Mol.Biol., 357, 2006
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2A5C
| Structure of Avidin in complex with the ligand 8-oxodeoxyadenosine | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 8-OXODEOXYADENOSINE, Avidin | Authors: | Conners, R, Hooley, E, Thomas, S, Brady, R.L. | Deposit date: | 2005-06-30 | Release date: | 2006-05-23 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Recognition of oxidatively modified bases within the biotin-binding site of avidin. J.Mol.Biol., 357, 2006
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2A5B
| Avidin complexed with 8-oxodeoxyguanosine | Descriptor: | 2'-DEOXY-8-OXOGUANOSINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin | Authors: | Conners, R, Hooley, E, Thomas, S, Brady, R.L. | Deposit date: | 2005-06-30 | Release date: | 2006-05-23 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.49 Å) | Cite: | Recognition of oxidatively modified bases within the biotin-binding site of avidin. J.Mol.Biol., 357, 2006
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2C4I
| Crystal structure of engineered avidin | Descriptor: | AVIDIN, BIOTIN, SULFATE ION | Authors: | Hytonen, V.P, Horha, J, Airenne, T.T, Niskanen, E.A, Helttunen, K, Johnson, M.S, Salminen, T.A, Kulomaa, M.S, Nordlund, H.R. | Deposit date: | 2005-10-19 | Release date: | 2006-07-05 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Controlling Quaternary Structure Assembly: Subunit Interface Engineering and Crystal Structure of Dual Chain Avidin. J.Mol.Biol., 359, 2006
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2G5L
| Streptavidin in complex with Nanotag | Descriptor: | (FME)(ASP)(VAL)(GLU)(ALA)(TRP)(LEU), GLYCEROL, SULFATE ION, ... | Authors: | Perbandt, M, Bruns, O, Vallazza, M, Lamla, T, Betzel, C, Erdmann, V.A. | Deposit date: | 2006-02-23 | Release date: | 2007-02-06 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.15 Å) | Cite: | High resolution structure of Streptavidin in complex with a novel high affinity peptide tag mimicking the biotin binding motif To be Published
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2OF9
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2OFA
| Crystal structure of apo AVR4 (R112L,C122S) | Descriptor: | Avidin-related protein 4/5, FORMIC ACID | Authors: | Livnah, O, Hayouka, R, Eisenberg-Domovich, Y. | Deposit date: | 2007-01-03 | Release date: | 2007-12-25 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Critical importance of loop conformation to avidin-enhanced hydrolysis of an active biotin ester. Acta Crystallogr.,Sect.D, 64, 2008
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2OF8
| Crystal structure of AVR4 (D39A/C122S)-BNA complex | Descriptor: | 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, Avidin-related protein 4/5, FORMIC ACID | Authors: | Livnah, O, Hayouka, R, Eisenberg-Domovich, Y. | Deposit date: | 2007-01-03 | Release date: | 2007-12-25 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.05 Å) | Cite: | Critical importance of loop conformation to avidin-enhanced hydrolysis of an active biotin ester. Acta Crystallogr.,Sect.D, 64, 2008
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2OFB
| Crystal structure of AVR4 (R112L/C122S)-BNA complex | Descriptor: | 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, Avidin-related protein 4/5, FORMIC ACID | Authors: | Livnah, O, Hayouka, R, Eisenberg-Domovich, Y. | Deposit date: | 2007-01-03 | Release date: | 2007-12-25 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.16 Å) | Cite: | Critical importance of loop conformation to avidin-enhanced hydrolysis of an active biotin ester. Acta Crystallogr.,Sect.D, 64, 2008
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2JGS
| Circular permutant of avidin | Descriptor: | BIOTIN, CIRCULAR PERMUTANT OF AVIDIN | Authors: | Maatta, J.A.E, Hytonen, V.P, Airenne, T.T, Niskanen, E, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R. | Deposit date: | 2007-02-14 | Release date: | 2008-03-04 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Rational Modification of Ligand-Binding Preference of Avidin by Circular Permutation and Mutagenesis. Chembiochem, 9, 2008
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2QCB
| T7-tagged full-length streptavidin complexed with ruthenium ligand | Descriptor: | N-(4-{[(2-AMINOETHYL)AMINO]SULFONYL}PHENYL)-5-[(3AS,4S,6AR)-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]PENTANAMIDE-(1,2,3,4,5,6-ETA)-BENZENE-CHLORO-RUTHENIUM(III), Streptavidin | Authors: | Le Trong, I, Creus, M, Pordea, A, Ward, T.R, Stenkamp, R.E. | Deposit date: | 2007-06-19 | Release date: | 2008-04-29 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | X-ray structure and designed evolution of an artificial transfer hydrogenase Angew.Chem.Int.Ed.Engl., 47, 2008
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2UYW
| Crystal structure of Xenavidin | Descriptor: | BIOTIN, FORMIC ACID, XENAVIDIN | Authors: | Helppolainen, S.H, Maatta, J.A.E, Airenne, T.T, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R. | Deposit date: | 2007-04-20 | Release date: | 2008-05-27 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structural and Functional Characteristics of Xenavidin, the First Frog Avidin from Xenopus Tropicalis. Bmc Struct.Biol., 9, 2009
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2UZ2
| Crystal structure of Xenavidin | Descriptor: | ACETATE ION, BIOTIN, XENAVIDIN | Authors: | Helppolainen, S.H, Maatta, J.A.E, Airenne, T.T, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R. | Deposit date: | 2007-04-24 | Release date: | 2008-06-03 | Last modified: | 2017-06-28 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structural and Functional Characteristics of Xenavidin, the First Frog Avidin from Xenopus Tropicalis. Bmc Struct.Biol., 9, 2009
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3EW2
| Crystal structure of rhizavidin-biotin complex | Descriptor: | BIOTIN, rhizavidin | Authors: | Livnah, O, Meir, A. | Deposit date: | 2008-10-14 | Release date: | 2008-12-23 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structure of rhizavidin: insights into the enigmatic high-affinity interaction of an innate biotin-binding protein dimer. J.Mol.Biol., 386, 2009
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3EW1
| Crystal structure of rhizavidin | Descriptor: | rhizavidin | Authors: | Livnah, O, Meir, A. | Deposit date: | 2008-10-14 | Release date: | 2008-12-23 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Crystal structure of rhizavidin: insights into the enigmatic high-affinity interaction of an innate biotin-binding protein dimer. J.Mol.Biol., 386, 2009
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2ZSC
| Tamavidin2, Novel Avidin-like Biotin-Binding Proteins from an Edible Mushroom | Descriptor: | BIOTIN, GLYCEROL, MAGNESIUM ION, ... | Authors: | Kakuta, Y, Okino, N, Ito, M, Yamamoto, T, Takakura, Y. | Deposit date: | 2008-09-05 | Release date: | 2009-02-17 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Tamavidins--novel avidin-like biotin-binding proteins from the Tamogitake mushroom Febs J., 276, 2009
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3FDC
| Crystal Structure of Avidin | Descriptor: | Avidin, iron(II) tetracyano-5-(2-Oxo-hexahydro-thieno[3,4-d]imidazol-6-yl)-pentanoic acid (4'-methyl-[2,2']bipyridinyl-4-ylmethyl)-amide | Authors: | Barker, K.D, Sazinsky, M.H, Eckermann, A.L, Abajian, C, Hartings, M.R, Rosenzweig, A.C, Meade, T.J. | Deposit date: | 2008-11-25 | Release date: | 2009-12-01 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Protein Binding and the Electronic Properties of Iron(II) Complexes: An Electrochemical and Optical Investigation of Outer Sphere Effects. Bioconjug.Chem., 20, 2009
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