Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6NVA
DownloadVisualize
BU of 6nva by Molmil
Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161.
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, SODIUM ION
Authors:Thomas, L.M, Chooback, L.
Deposit date:2019-02-04
Release date:2019-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161.
To Be Published
6MQH
DownloadVisualize
BU of 6mqh by Molmil
Crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) from Burkholderia mallei
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-10-09
Release date:2018-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) from Burkholderia mallei
To be Published
6H7S
DownloadVisualize
BU of 6h7s by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant in complex with L-2-keto-3deoxy-gluconate
Descriptor: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, L-2-keto-3deoxy-gluconate
Authors:Crennell, S.J, Danson, M.J, Royer, S.
Deposit date:2018-07-31
Release date:2019-08-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.202 Å)
Cite:Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant
To Be Published
6H7R
DownloadVisualize
BU of 6h7r by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant
Descriptor: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, GLYCEROL
Authors:Crennell, S.J, Danson, M.J, Royer, S.
Deposit date:2018-07-31
Release date:2019-08-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant
To Be Published
6H4E
DownloadVisualize
BU of 6h4e by Molmil
Proteus mirabilis N-acetylneuraminate lyase
Descriptor: Putative N-acetylneuraminate lyase, SULFATE ION
Authors:North, R.A, Garcia-Bonete, M.J, Goyal, P, Katona, G, Dobson, R.C.J, Friemann, R.
Deposit date:2018-07-21
Release date:2019-06-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.561 Å)
Cite:The structure of Proteus mirabilis N-acetylneuraminate lyase reveals an intermolecular disulphide bond
To Be Published
6H2S
DownloadVisualize
BU of 6h2s by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant, pyruvate complex
Descriptor: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Crennell, S.J, Danson, M.J, Royer, S.
Deposit date:2018-07-16
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant
To Be Published
6H2R
DownloadVisualize
BU of 6h2r by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant
Descriptor: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, GLYCEROL, ...
Authors:Crennell, S.J, Danson, M.J, Royer, S.
Deposit date:2018-07-16
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.574 Å)
Cite:Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant
To Be Published
6GV2
DownloadVisualize
BU of 6gv2 by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y103F,Y130F,A198F variant in complex with L-2-keto, 3-deoxy-galactonate
Descriptor: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, 3-DEOXY-D-ARABINO-HEXONIC ACID, ...
Authors:Crennell, S.J, Danson, M.J, Royer, S.
Deposit date:2018-06-20
Release date:2019-07-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
To Be Published
6GT8
DownloadVisualize
BU of 6gt8 by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
Descriptor: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, 3-DEOXY-D-ARABINO-HEXONIC ACID
Authors:Crennell, S.J, Danson, M.J, Royer, S.
Deposit date:2018-06-15
Release date:2019-06-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
To Be Published
6GSO
DownloadVisualize
BU of 6gso by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
Descriptor: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, GLYCEROL
Authors:Crennell, S.J, Danson, M.J, Royer, S.
Deposit date:2018-06-15
Release date:2019-06-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
To Be Published
6DAQ
DownloadVisualize
BU of 6daq by Molmil
PhdJ bound to substrate intermediate
Descriptor: PhdJ
Authors:Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
Deposit date:2018-05-01
Release date:2019-04-10
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6DAN
DownloadVisualize
BU of 6dan by Molmil
PhdJ WT 2 Angstroms resolution
Descriptor: CHLORIDE ION, PhdJ
Authors:Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
Deposit date:2018-05-01
Release date:2019-04-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6DAO
DownloadVisualize
BU of 6dao by Molmil
NahE WT selenomethionine
Descriptor: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
Authors:Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
Deposit date:2018-05-01
Release date:2019-05-08
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.939 Å)
Cite:Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6G3Z
DownloadVisualize
BU of 6g3z by Molmil
Sulfolobus sulfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with D-KDPG
Descriptor: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, 2-keto 3 deoxy 6 phospho gluconate, ISOPROPYL ALCOHOL
Authors:Crennell, S.J.
Deposit date:2018-03-26
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Insights into the Substrate Specificity of Archaeal Entner-Doudoroff Aldolases: The Structures of Picrophilus torridus 2-Keto-3-deoxygluconate Aldolase and Sulfolobus solfataricus 2-Keto-3-deoxy-6-phosphogluconate Aldolase in Complex with 2-Keto-3-deoxy-6-phosphogluconate.
Biochemistry, 57, 2018
5ZKA
DownloadVisualize
BU of 5zka by Molmil
Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum complexed with Pyruvate
Descriptor: 1,2-ETHANEDIOL, N-acetylneuraminate lyase, TRIETHYLENE GLYCOL
Authors:Kumar, J.P, Rao, H, Nayak, V, Ramaswamy, S.
Deposit date:2018-03-23
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZJM
DownloadVisualize
BU of 5zjm by Molmil
Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum
Descriptor: 1,2-ETHANEDIOL, N-acetylneuraminate lyase
Authors:Kumar, J.P, Rao, H, Nayak, V, Subramanian, R.
Deposit date:2018-03-21
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.323 Å)
Cite:Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
6ARH
DownloadVisualize
BU of 6arh by Molmil
Crystal structure of Human NAL at a resolution of 1.6 Angstrom
Descriptor: ACETATE ION, N-acetylneuraminate lyase
Authors:Pearce, F.G, Bundela, R, Keown, J.R.
Deposit date:2017-08-22
Release date:2018-08-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Human NAL at a resolution of 1.6 Angstrom
To Be Published
5UD6
DownloadVisualize
BU of 5ud6 by Molmil
Crystal structure of DHDPS from Cyanidioschyzon merolae with lysine bound
Descriptor: CALCIUM ION, Dihydrodipicolinate synthase, LYSINE
Authors:Watkin, S, Keown, J.R, Pearce, F.G.
Deposit date:2016-12-23
Release date:2017-12-27
Last modified:2018-12-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of DHDPS from Cyanidioschyzon merolae with lysine bound
To Be Published
5T25
DownloadVisualize
BU of 5t25 by Molmil
Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE, SODIUM ION
Authors:Chooback, L, Thomas, L.M, Karsten, W.E, Fleming, C.D, Seabourn, P.
Deposit date:2016-08-23
Release date:2017-03-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
To Be Published
5T26
DownloadVisualize
BU of 5t26 by Molmil
Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Chooback, L, Thomas, L.M, Karsten, W.E, Fleming, C.D, Seabourn, P.
Deposit date:2016-08-23
Release date:2016-10-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
To Be Published
5KZE
DownloadVisualize
BU of 5kze by Molmil
N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus
Descriptor: GLYCEROL, N-acetylneuraminate lyase, SULFATE ION
Authors:North, R.A, Watson, A.J.A, Pearce, F.G, Muscroft-Taylor, A.C, Friemann, R, Fairbanks, A.J, Dobson, R.C.J.
Deposit date:2016-07-25
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structure and inhibition of N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus.
FEBS Lett., 590, 2016
5KZD
DownloadVisualize
BU of 5kzd by Molmil
N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus with bound sialic acid alditol
Descriptor: (2~{S},4~{S},5~{R},6~{R},7~{S},8~{R})-5-acetamido-2,4,6,7,8,9-hexakis(oxidanyl)nonanoic acid, N-acetylneuraminate lyase
Authors:North, R.A, Watson, A.J.A, Pearce, F.G, Muscroft-Taylor, A.C, Friemann, R, Fairbanks, A.J, Dobson, R.C.J.
Deposit date:2016-07-25
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.334 Å)
Cite:Structure and inhibition of N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus.
FEBS Lett., 590, 2016
5LKY
DownloadVisualize
BU of 5lky by Molmil
X-ray crystal structure of N-acetylneuraminic acid lyase in complex with pyruvate, with the phenylalanine at position 190 replaced with the non-canonical amino acid dihydroxypropylcysteine.
Descriptor: DI(HYDROXYETHYL)ETHER, N-acetylneuraminate lyase
Authors:Windle, C.L, Trinh, C.H, Pearson, A.R, Nelson, A.S, Berry, A.
Deposit date:2016-07-25
Release date:2017-03-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Extending enzyme molecular recognition with an expanded amino acid alphabet.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5KTL
DownloadVisualize
BU of 5ktl by Molmil
Dihydrodipicolinate synthase from the industrial and evolutionarily important cyanobacteria Anabaena variabilis.
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, MANGANESE (II) ION
Authors:Christensen, J.B, Panjikar, S, Perugini, M.
Deposit date:2016-07-11
Release date:2016-11-30
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure and Function of Cyanobacterial DHDPS and DHDPR.
Sci Rep, 6, 2016
5J5D
DownloadVisualize
BU of 5j5d by Molmil
Crystal structure of Dihydrodipicolinate Synthase from Mycobacterium tuberculosis in complex with alpha-ketopimelic acid
Descriptor: 2-oxoheptanedioic acid, 4-hydroxy-tetrahydrodipicolinate synthase, SODIUM ION
Authors:Navratna, V, Gopal, B.
Deposit date:2016-04-02
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inhibition of Mycobacterium tuberculosis dihydrodipicolinate synthase by alpha-ketopimelic acid and its other structural analogues
Sci Rep, 6, 2016

220472

PDB entries from 2024-05-29

PDB statisticsPDBj update infoContact PDBjnumon