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1OZI
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The alternatively spliced PDZ2 domain of PTP-BL
Descriptor: protein tyrosine phosphatase
Authors:Walma, T, Aelen, J, Oostendorp, M, van den Berk, L, Hendriks, W, Vuister, G.W.
Deposit date:2003-04-09
Release date:2004-01-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:A Closed Binding Pocket and Global Destabilization Modify the Binding Properties of an Alternatively Spliced Form of the Second PDZ Domain of PTP-BL.
Structure, 12, 2004
1OBY
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BU of 1oby by Molmil
Crystal structure of the complex of PDZ2 of syntenin with a syndecan-4 peptide.
Descriptor: SULFATE ION, SYNDECAN-4, SYNTENIN 1
Authors:Kang, B.S, Cooper, D.R, Devedjiev, Y, Derewenda, U, Derewenda, Z.S.
Deposit date:2003-01-31
Release date:2003-07-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular Roots of Degenerate Specificity in Syntenin'S Pdz2 Domain: Reassessment of the Pdz Recognition Paradigm
Structure, 11, 2003
1MFG
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BU of 1mfg by Molmil
The Structure of ERBIN PDZ domain bound to the Carboxy-terminal tail of the ErbB2 Receptor
Descriptor: Erb-B2 INTERACTING PROTEIN, Erb-B2 carboxyl-terminal fragment
Authors:Birrane, G, Chung, J, Ladias, J.A.
Deposit date:2002-08-10
Release date:2003-01-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Novel mode of ligand recognition by the erbin PDZ domain
J.Biol.Chem., 278, 2003
1MFL
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The Structure of ERBIN PDZ domain bound to the Carboxy-terminal tail of the ErbB2 Receptor
Descriptor: Erb-B2 INTERACTING PROTEIN, PHOSPHORYLATED Erb-B2 carboxyl-terminal fragment.
Authors:Birrane, G, Chung, J, Ladias, J.A.
Deposit date:2002-08-12
Release date:2003-01-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Novel mode of ligand recognition by the erbin PDZ domain
J.Biol.Chem., 278, 2003
1Q7X
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Solution structure of the alternatively spliced PDZ2 domain (PDZ2b) of PTP-Bas (hPTP1E)
Descriptor: PDZ2b domain of PTP-Bas (hPTP1E)
Authors:Kachel, N, Erdmann, K.S, Kremer, W, Wolff, P, Gronwald, W, Heumann, R, Kalbitzer, H.R, Structural Proteomics in Europe (SPINE)
Deposit date:2003-08-20
Release date:2003-12-02
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structure determination and ligand interactions of the PDZ2b domain of PTP-Bas (hPTP1E): Splicing induced modulation of ligand specificity.
J.Mol.Biol., 334, 2003
1QAU
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UNEXPECTED MODES OF PDZ DOMAIN SCAFFOLDING REVEALED BY STRUCTURE OF NNOS-SYNTROPHIN COMPLEX
Descriptor: NEURONAL NITRIC OXIDE SYNTHASE (RESIDUES 1-130)
Authors:Hillier, B.J, Christopherson, K.S, Prehoda, K.E, Bredt, D.S, Lim, W.A.
Deposit date:1999-03-29
Release date:1999-05-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Unexpected modes of PDZ domain scaffolding revealed by structure of nNOS-syntrophin complex.
Science, 284, 1999
5E21
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BU of 5e21 by Molmil
PDZ2 of LNX2 at 277K,single conformer model
Descriptor: Ligand of Numb protein X 2
Authors:Hekstra, D.R, White, K.I, Socolich, M.A, Ranganathan, R.
Deposit date:2015-09-30
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.011 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
2QKV
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BU of 2qkv by Molmil
Crystal Structure of the C645S Mutant of the 5th PDZ Domain of InaD
Descriptor: Inactivation-no-after-potential D protein
Authors:Ranganathan, R, Socolich, M.
Deposit date:2007-07-11
Release date:2007-11-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Dynamic Scaffolding in a G Protein-Coupled Signaling System.
Cell(Cambridge,Mass.), 131, 2007
2QT5
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BU of 2qt5 by Molmil
Crystal Structure of GRIP1 PDZ12 in Complex with the Fras1 Peptide
Descriptor: (ASN)(ASN)(LEU)(GLN)(ASP)(GLY)(THR)(GLU)(VAL), 1,2-ETHANEDIOL, ACETIC ACID, ...
Authors:Long, J, Wei, Z, Feng, W, Zhao, Y, Zhang, M.
Deposit date:2007-08-01
Release date:2008-06-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Supramodular nature of GRIP1 revealed by the structure of its PDZ12 tandem in complex with the carboxyl tail of Fras1.
J.Mol.Biol., 375, 2008
2R4H
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BU of 2r4h by Molmil
Crystal structure of a C1190S mutant of the 6th PDZ domain of human membrane associated guanylate kinase
Descriptor: HISTIDINE, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1
Authors:Ugochukwu, E, Pilka, E.S, Hozjan, V, Kavanagh, K.L, Cooper, C, Pike, A.C.W, Elkins, J.M, Doyle, D.A, von Delft, F, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2007-08-31
Release date:2007-10-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of a C1190S mutant of the 6th PDZ domain of human membrane associated guanylate kinase.
To be Published
2REY
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BU of 2rey by Molmil
Crystal structure of the PDZ domain of human dishevelled 2 (homologous to Drosophila dsh)
Descriptor: Segment polarity protein dishevelled homolog DVL-2
Authors:Papagrigoriou, E, Gileadi, C, Elkins, J, Cooper, C, Ugochukwu, E, Turnbull, A, Pike, A.C.W, Gileadi, O, von Delft, F, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2007-09-27
Release date:2007-10-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of the PDZ domains of human dishevelled 2 (homologous to Drosophila dsh).
To be Published
5DTH
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BU of 5dth by Molmil
Crystal structure of MUPP1 PDZ8 domain from rattus norvegicus
Descriptor: Multiple PDZ domain protein
Authors:Li, J, Lv, Y, Zhu, H, Liu, W.
Deposit date:2015-09-18
Release date:2016-09-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure and biochemical characteristics of MUPP1 PDZ8 domain from rattus norregicus
To Be Published
5E1Y
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BU of 5e1y by Molmil
PDZ2 of LNX2 at 277K, model with alternate conformations
Descriptor: Ligand of Numb protein X 2
Authors:Hekstra, D.R, White, K.I, Socolich, M.A, Ranganathan, R.
Deposit date:2015-09-30
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.011 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
2RCZ
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BU of 2rcz by Molmil
Structure of the second PDZ domain of ZO-1
Descriptor: Tight junction protein ZO-1
Authors:Lavie, A, Lye, M.F.
Deposit date:2007-09-20
Release date:2007-10-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Domain swapping within PDZ2 is responsible for dimerization of ZO proteins.
J.Biol.Chem., 282, 2007
5EMB
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BU of 5emb by Molmil
Crystal structure of the SNX27 PDZ domain bound to the C-terminal phosphorylated PTHR PDZ binding motif
Descriptor: GLU-GLU-TRP-SEP-THR-VAL-MET, Sorting nexin-27
Authors:Collins, B.M, Clairfeuille, T.
Deposit date:2015-11-06
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex.
Nat.Struct.Mol.Biol., 23, 2016
5EYZ
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BU of 5eyz by Molmil
CRYSTAL STRUCTURE OF THE PTPN4 PDZ DOMAIN COMPLEXED WITH THE TAILORED PEPTIDE CYTO8-RETEV
Descriptor: CHLORIDE ION, CYTO8-RETEV, Tyrosine-protein phosphatase non-receptor type 4
Authors:Maisonneuve, P, Vaney, M.C, Babault, B, Caillet-Saguy, C, Lafon, M, Delepierre, M, Cordier, F, Wolff, N.
Deposit date:2015-11-26
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Molecular Basis of the Interaction of the Human Protein Tyrosine Phosphatase Non-receptor Type 4 (PTPN4) with the Mitogen-activated Protein Kinase p38 gamma.
J.Biol.Chem., 291, 2016
5EZ0
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BU of 5ez0 by Molmil
CRYSTAL STRUCTURE OF THE PTPN4 PDZ DOMAIN COMPLEXED WITH THE PDZ BINDING MOTIF OF THE MITOGEN ACTIVATED PROTEIN KINASE P38GAMMA.
Descriptor: Mitogen-activated protein kinase 12, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 4
Authors:Maisonneuve, P, Vaney, M.C, Caillet-Saguy, C, Lafon, M, Delepierre, M, Cordier, F, Wolff, N.
Deposit date:2015-11-26
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Molecular Basis of the Interaction of the Human Protein Tyrosine Phosphatase Non-receptor Type 4 (PTPN4) with the Mitogen-activated Protein Kinase p38 gamma.
J.Biol.Chem., 291, 2016
5F67
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BU of 5f67 by Molmil
An exquisitely specific PDZ/target recognition revealed by the structure of INAD PDZ3 in complex with TRP channel tail
Descriptor: Inactivation-no-after-potential D protein, TRP C terminal Tail
Authors:Ye, F, Shang, Y, Liu, W, Zhang, M.
Deposit date:2015-12-05
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:An Exquisitely Specific PDZ/Target Recognition Revealed by the Structure of INAD PDZ3 in Complex with TRP Channel Tail
Structure, 24, 2016
5FB8
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BU of 5fb8 by Molmil
Structure of Interleukin-16 bound to the 14.1 antibody
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Anti-IL-16 antibody 14.1 Fab domain Heavy Chain, ...
Authors:Hall, G, Cowan, R, Bayliss, R, Carr, M.
Deposit date:2015-12-14
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structure of a Potential Therapeutic Antibody Bound to Interleukin-16 (IL-16): MECHANISTIC INSIGHTS AND NEW THERAPEUTIC OPPORTUNITIES.
J.Biol.Chem., 291, 2016
2RRM
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BU of 2rrm by Molmil
Interplay between phosphatidyl-inositol-phosphates and claudins upon binding to the 1st PDZ domain of zonula occludens 1
Descriptor: Tight junction protein ZO-1
Authors:Hiroaki, H, Satomura, K, Goda, N, Umetsu, Y, Taniguchi, R, Ikegami, T, Furuse, M.
Deposit date:2011-01-06
Release date:2011-05-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:1H, 13C, and 15N resonance assignment of the first PDZ domain of mouse ZO-1
Biomol.Nmr Assign., 5, 2011
2VRF
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BU of 2vrf by Molmil
CRYSTAL STRUCTURE OF THE HUMAN BETA-2-SYNTROPHIN PDZ DOMAIN
Descriptor: 1,2-ETHANEDIOL, BETA-2-SYNTROPHIN
Authors:Sun, Z, Roos, A.K, Pike, A.C.W, Pilka, E.S, Cooper, C, Elkins, J.M, Murray, J, Arrowsmith, C.H, Doyle, D, Edwards, A, von Delft, F, Bountra, C, Oppermann, U.
Deposit date:2008-03-31
Release date:2008-04-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Human Beta-2-Syntrophin Pdz Domain
To be Published
2UZC
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BU of 2uzc by Molmil
Structure of human PDLIM5 in complex with the C-terminal peptide of human alpha-actinin-1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PDZ AND LIM DOMAIN 5
Authors:Bunkoczi, G, Elkins, J, Salah, E, Burgess-Brown, N, Papagrigoriou, E, Pike, A.C.W, Turnbull, A, Gileadi, O, von Delft, F, Arrowsmith, C.H, Edwards, A, Sundstrom, M, Weigelt, J, Doyle, D.
Deposit date:2007-04-27
Release date:2007-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Unusual binding interactions in PDZ domain crystal structures help explain binding mechanisms.
Protein Sci., 19, 2010
2V1W
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BU of 2v1w by Molmil
Crystal structure of human LIM protein RIL (PDLIM4) PDZ domain bound to the C-terminal peptide of human alpha-actinin-1
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, PDZ AND LIM DOMAIN PROTEIN 4, ...
Authors:Soundararajan, M, Shrestha, L, Pike, A.C.W, Salah, E, Burgess-Brown, N, Elkins, J, Umeano, C, Ugochukwu, E, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Sundstrom, M, Doyle, D.
Deposit date:2007-05-30
Release date:2007-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unusual Binding Interactions in Pdz Domain Crystal Structures Help Explain Binding Mechanisms.
Protein Sci., 19, 2010
5G1D
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BU of 5g1d by Molmil
The complex structure of syntenin-1 PDZ domain with c-terminal extension
Descriptor: SYNDECAN-4, SYNTENIN-1
Authors:Lee, I, Kim, H, Yun, J.H, Lee, W.
Deposit date:2016-03-25
Release date:2016-11-23
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016
5ELQ
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BU of 5elq by Molmil
Crystal structure of the SNX27 PDZ domain bound to the C-terminal DGKzeta PDZ binding motif
Descriptor: GLU-ASP-GLN-GLU-THR-ALA-VAL, Sorting nexin-27, TETRAETHYLENE GLYCOL
Authors:Collins, B.M, Clairfeuille, T.
Deposit date:2015-11-05
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex.
Nat.Struct.Mol.Biol., 23, 2016

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