Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5X6J
DownloadVisualize
BU of 5x6j by Molmil
Crystal structure of B. globisporus adenylate kinase variant
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Moon, S, Bae, E.
Deposit date:2017-02-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability.
Struct Dyn., 6, 2019
5EJE
DownloadVisualize
BU of 5eje by Molmil
Crystal structure of E. coli Adenylate kinase G56C/T163C double mutant in complex with Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, COBALT (II) ION
Authors:Sauer, U.H, Kovermann, M, Grundstrom, C, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2015-11-01
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for ligand binding to an enzyme by a conformational selection pathway.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3X2S
DownloadVisualize
BU of 3x2s by Molmil
Crystal structure of pyrene-conjugated adenylate kinase
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Fujii, A, Sekiguchi, Y, Matsumura, H, Inoue, T, Chung, W.-S, Hirota, S, Matsuo, T.
Deposit date:2014-12-31
Release date:2015-04-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Excimer Emission Properties on Pyrene-Labeled Protein Surface: Correlation between Emission Spectra, Ring Stacking Modes, and Flexibilities of Pyrene Probes.
Bioconjug.Chem., 26, 2015
4X8H
DownloadVisualize
BU of 4x8h by Molmil
Crystal structure of E. coli Adenylate kinase P177A mutant
Descriptor: Adenylate kinase
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
4X8L
DownloadVisualize
BU of 4x8l by Molmil
Crystal structure of E. coli Adenylate kinase P177A mutant in complex with inhibitor Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
4X8O
DownloadVisualize
BU of 4x8o by Molmil
Crystal structure of E. coli Adenylate kinase Y171W mutant in complex with inhibitor Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
4X8M
DownloadVisualize
BU of 4x8m by Molmil
Crystal structure of E. coli Adenylate kinase Y171W mutant
Descriptor: Adenylate kinase
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
4W5H
DownloadVisualize
BU of 4w5h by Molmil
New structural conformations of adenylate kinase from Streptococcus pneumoniae D39
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Adenylate kinase
Authors:Thach, T.T, Lee, S.H.
Deposit date:2014-08-18
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:New crystal structures of adenylate kinase from Streptococcus pneumoniae D39 in two conformations.
Acta Crystallogr.,Sect.F, 70, 2014
4W5J
DownloadVisualize
BU of 4w5j by Molmil
New structural conformations of adenylate kinase from Streptococcus pneumoniae D39 with Ap5A
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION
Authors:Thach, T.T, Lee, S.H.
Deposit date:2014-08-18
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:New crystal structures of adenylate kinase from Streptococcus pneumoniae D39 in two conformations.
Acta Crystallogr.,Sect.F, 70, 2014
4TYQ
DownloadVisualize
BU of 4tyq by Molmil
Crystal structure of an adenylate kinase mutant--AKm2
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2014-07-09
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of thermally stable adenylate kinase mutants designed by local structural entropy optimization and structure-guided mutagenesis
J KOREAN SOC APPL BIOL CHEM, 57, 2014
4TYP
DownloadVisualize
BU of 4typ by Molmil
Crystal structure of an adenylate kinase mutant--AKm1
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Moon, S, Bae, E.
Deposit date:2014-07-09
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of thermally stable adenylate kinase mutants designed by local structural entropy optimization and structure-guided mutagenesis
J KOREAN SOC APPL BIOL CHEM, 57, 2014
4QBG
DownloadVisualize
BU of 4qbg by Molmil
Crystal structure of a stable adenylate kinase variant AKlse4
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2014-05-08
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
Proteins, 82, 2014
4QBH
DownloadVisualize
BU of 4qbh by Molmil
Crystal structure of a stable adenylate kinase variant AKlse5
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2014-05-08
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
Proteins, 82, 2014
4QBF
DownloadVisualize
BU of 4qbf by Molmil
Crystal structure of a stable adenylate kinase variant AKlse2
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Moon, S, Bae, E.
Deposit date:2014-05-08
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
Proteins, 82, 2014
4QBI
DownloadVisualize
BU of 4qbi by Molmil
Crystal structure of a stable adenylate kinase variant AKlse6
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2014-05-08
Release date:2014-06-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
Proteins, 82, 2014
4PZL
DownloadVisualize
BU of 4pzl by Molmil
The crystal structure of adenylate kinase from Francisella tularensis subsp. tularensis SCHU S4
Descriptor: Adenylate kinase, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Tan, K, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-03-31
Release date:2014-04-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of adenylate kinase from Francisella tularensis subsp. tularensis SCHU S4
To be Published
4NU0
DownloadVisualize
BU of 4nu0 by Molmil
Crystal structure of Adenylate kinase from Streptococcus pneumoniae with Ap5A
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION
Authors:Thach, T.T, Luong, T.T, Lee, S.H, Rhee, D.K.
Deposit date:2013-12-03
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.485 Å)
Cite:Adenylate kinase from Streptococcus pneumoniae is essential for growth through its catalytic activity
FEBS Open Bio, 4, 2014
4NTZ
DownloadVisualize
BU of 4ntz by Molmil
Crystal structure of Adenylate kinase from Streptococcus pneumoniae
Descriptor: Adenylate kinase, SULFATE ION
Authors:Thach, T.T, Luong, T.T, Lee, S.H, Rhee, D.K.
Deposit date:2013-12-03
Release date:2014-07-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Adenylate kinase from Streptococcus pneumoniae is essential for growth through its catalytic activity
FEBS Open Bio, 4, 2014
4NP6
DownloadVisualize
BU of 4np6 by Molmil
Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor
Descriptor: Adenylate kinase
Authors:Kim, Y, Zhou, M, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-11-20
Release date:2013-12-18
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor
To be Published
4CF7
DownloadVisualize
BU of 4cf7 by Molmil
Crystal structure of adenylate kinase from Aquifex aeolicus with MgADP bound
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENYLATE KINASE, ...
Authors:Kerns, S.J, Agafonov, R.V, Cho, Y.-J, Pontiggia, F, Otten, R, Pachov, D.V, Kutter, S, Phung, L.A, Murphy, P.N, Thai, V, Hagan, M.F, Kern, D.
Deposit date:2013-11-13
Release date:2014-12-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.594 Å)
Cite:The Energy Landscape of Adenylate Kinase During Catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4MKH
DownloadVisualize
BU of 4mkh by Molmil
Crystal structure of a stable adenylate kinase variant AKv18
Descriptor: 1,2-ETHANEDIOL, Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ...
Authors:Moon, S, Bae, E.
Deposit date:2013-09-05
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:An integrated approach for thermal stabilization of a mesophilic adenylate kinase.
Proteins, 82, 2014
4MKG
DownloadVisualize
BU of 4mkg by Molmil
Crystal structure of a stable adenylate kinase variant AKv8
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Moon, S, Jung, D, Bae, E.
Deposit date:2013-09-05
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:An integrated approach for thermal stabilization of a mesophilic adenylate kinase.
Proteins, 82, 2014
4MKF
DownloadVisualize
BU of 4mkf by Molmil
Crystal structure of a stable adenylate kinase variant AKv3
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
Authors:Moon, S, Jung, D, Bae, E.
Deposit date:2013-09-05
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:An integrated approach for thermal stabilization of a mesophilic adenylate kinase.
Proteins, 82, 2014
4K46
DownloadVisualize
BU of 4k46 by Molmil
Crystal Structure of Adenylate Kinase from Photobacterium profundum
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, ...
Authors:Cho, Y.-J, Kerns, S.J, Kern, D.
Deposit date:2013-04-12
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Alike but Different: Adenylate kinases from E. Coli, Aquifex, and P. profundum
To be Published
4JLP
DownloadVisualize
BU of 4jlp by Molmil
Crystal structure of R150K aquifex adenylate kinase mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Phung, L, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.433 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon