PDB: 1416 resultsInfo pagesStatus searchChemie searchBIRD

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5CHW	Structure of ISG15 in space group P212121 Descriptor: GLYCEROL, SULFATE ION, Ubiquitin-like protein ISG15 Authors: Fritz, G, Basters, A. Deposit date: 2015-07-10 Release date: 2016-09-28 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure of ISG15 in space group P212121 To Be Published
5CHF	Crystal structure of murine ISG15 in space group P21212 Descriptor: GLYCEROL, SULFATE ION, Ubiquitin-like protein ISG15 Authors: Fritz, G, Basters, A. Deposit date: 2015-07-10 Release date: 2016-09-28 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of murine ISG15 in space group P21212 To Be Published
5DK8	Human ubiquitin in the P1 space group Descriptor: MAGNESIUM ION, Polyubiquitin-B Authors: Camara-Artigas, A, Bacarizo, J. Deposit date: 2015-09-03 Release date: 2015-12-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.32 Å) Cite: New crystal form of human ubiquitin in the presence of magnesium. Acta Crystallogr.,Sect.F, 72, 2016
3U30	Crystal structure of a linear-specific Ubiquitin fab bound to linear ubiquitin Descriptor: Heavy chain Fab, Light chain Fab, linear di-ubiquitin Authors: Matsumoto, M.L, Dong, K.C, Yu, C, Phu, L, Gao, X, Hannoush, R.N, Hymowitz, S.G, Kirkpatrick, D.S, Dixit, V.M, Kelley, R.F. Deposit date: 2011-10-04 Release date: 2012-01-18 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.428 Å) Cite: Engineering and structural characterization of a linear polyubiquitin-specific antibody. J.Mol.Biol., 418, 2012
5EMZ	Crystal structure of K48-linked diubiquitin with F45W mutation in the proximal unit Descriptor: Polyubiquitin-B, SULFATE ION Authors: Nakasone, M.A, Paukstelis, P.J, Fushman, D. Deposit date: 2015-11-07 Release date: 2016-11-16 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.66 Å) Cite: Structural characterization and practical fluorescence applications of the F45W ubiquitin mutant To Be Published
3VFK	The structure of monodechloro-teicoplanin in complex with its ligand, using ubiquitin as a ligand carrier Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, 8-METHYLNONANOIC ACID, ... Authors: Economou, N.J, Weeks, S.D, Grasty, K.C, Loll, P.J. Deposit date: 2012-01-09 Release date: 2013-01-09 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structure of the complex between teicoplanin and a bacterial cell-wall peptide: use of a carrier-protein approach. Acta Crystallogr.,Sect.D, 69, 2013
3VDZ	Tailoring Encodable Lanthanide-Binding Tags as MRI Contrast Agents: xq-dSE3-Ubiquitin at 2.4 Angstroms Descriptor: GADOLINIUM ATOM, SULFATE ION, Ubiquitin-40S ribosomal protein S27a Authors: Daughtry, K.D, Martin, L.J, Surraju, A, Imperiali, B, Allen, K.N. Deposit date: 2012-01-06 Release date: 2012-11-28 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Tailoring encodable lanthanide-binding tags as MRI contrast agents. Chembiochem, 13, 2012
3M3J	A new crystal form of Lys48-linked diubiquitin Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Ubiquitin Authors: Trempe, J.F, Brown, N.R, Noble, M.E.M, Endicott, J.A. Deposit date: 2010-03-09 Release date: 2010-03-23 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: A new crystal form of Lys48-linked diubiquitin. Acta Crystallogr.,Sect.F, 66, 2010
3H7P	Crystal structure of K63-linked di-ubiquitin Descriptor: CADMIUM ION, Ubiquitin Authors: Weeks, S.D, Grasty, K.C, Hernandez-Cuebas, L, Loll, P.J. Deposit date: 2009-04-28 Release date: 2009-09-22 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structures of Lys-63-linked tri- and di-ubiquitin reveal a highly extended chain architecture. Proteins, 77, 2009
3H1U	Structure of ubiquitin in complex with Cd ions Descriptor: CADMIUM ION, Ubiquitin Authors: Qureshi, I.A, Ferron, F, Cheung, P, Lescar, J. Deposit date: 2009-04-14 Release date: 2009-05-05 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystallographic structure of ubiquitin in complex with cadmium ions BMC RES NOTES, 2, 2009
3H7S	Crystal structures of K63-linked di- and tri-ubiquitin reveal a highly extended chain architecture Descriptor: Ubiquitin, ZINC ION Authors: Weeks, S.D, Grasty, K.C, Hernandez-Cuebas, L, Loll, P.J. Deposit date: 2009-04-28 Release date: 2009-09-22 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structures of Lys-63-linked tri- and di-ubiquitin reveal a highly extended chain architecture. Proteins, 77, 2009
3N30	Crystal Structure of cubic Zn3-hUb (human ubiquitin) adduct Descriptor: Ubiquitin, ZINC ION Authors: Siliqi, D, Caliandro, R, Arnesano, F, Natile, G, Falini, G, Fermani, S, Belviso, B.D. Deposit date: 2010-05-19 Release date: 2011-01-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystallographic analysis of metal-ion binding to human ubiquitin. Chemistry, 17, 2011
3N32	The crystal structure of human Ubiquitin adduct with Zeise's salt Descriptor: PLATINUM (II) ION, Ubiquitin Authors: Siliqi, D, Caliandro, R, Falini, G, Fermani, S, Natile, G, Arnesano, F, Belviso, B.D. Deposit date: 2010-05-19 Release date: 2011-01-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.795 Å) Cite: Crystallographic analysis of metal-ion binding to human ubiquitin. Chemistry, 17, 2011
3HM3	The Structure and conformation of Lys-63 linked tetra-ubiquitin Descriptor: Ubiquitin, ZINC ION Authors: Datta, A.B, Hura, G.L, Wolberger, C. Deposit date: 2009-05-28 Release date: 2009-08-25 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.96 Å) Cite: The structure and conformation of Lys63-linked tetraubiquitin. J.Mol.Biol., 392, 2009
3NOB	Structure of K11-linked di-ubiquitin Descriptor: SULFATE ION, Ubiquitin Authors: Dong, K.C, Matsumoto, M.L, Hymowitz, S.G. Deposit date: 2010-06-25 Release date: 2010-08-11 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.19 Å) Cite: K11-Linked Polyubiquitination in Cell Cycle Control Revealed by a K11 Linkage-Specific Antibody. Mol.Cell, 39, 2010
3NS8	Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5 Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Ubiquitin Authors: Zhang, D, LaRonde-LeBlanc, N, Fushman, D. Deposit date: 2010-07-01 Release date: 2011-07-20 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.707 Å) Cite: Structural and biochemical studies of the open state of Lys48-linked diubiquitin. Biochim.Biophys.Acta, 1823, 2012
3OJ3	Crystal structure of the A20 ZnF4 and ubiquitin complex Descriptor: Tumor necrosis factor alpha-induced protein 3, Ubiquitin, ZINC ION Authors: Bosanac, I, Hymowitz, S.G. Deposit date: 2010-08-20 Release date: 2010-12-08 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-KB Signaling Mol.Cell, 40, 2010
3ONS	Crystal structure of Human Ubiquitin in a new crystal form Descriptor: Ubiquitin Authors: Amodeo, G.A, Huang, K.Y, Mcdermott, A.E, Tong, L. Deposit date: 2010-08-30 Release date: 2011-02-23 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: The structure of human ubiquitin in 2-methyl-2,4-pentanediol: a new conformational switch. Protein Sci., 20, 2011
3QHT	Crystal Structure of the Monobody ySMB-1 bound to yeast SUMO Descriptor: GLYCEROL, Monobody ySMB-1, Ubiquitin-like protein SMT3 Authors: Koide, S, Gilbreth, R.N. Deposit date: 2011-01-26 Release date: 2011-05-11 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Isoform-specific monobody inhibitors of small ubiquitin-related modifiers engineered using structure-guided library design. Proc.Natl.Acad.Sci.USA, 108, 2011
6QK9	A dimeric ubiquitin formed by a single amino acid substitution Descriptor: Polyubiquitin-B Authors: Gabrielsen, M, Kowalczyk, D, Buetow, L, Huang, D.T. Deposit date: 2019-01-28 Release date: 2019-07-24 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.231 Å) Cite: Identification and Characterization of Mutations in Ubiquitin Required for Non-covalent Dimer Formation. Structure, 27, 2019
6QF8	Solution NMR ensemble for human ubiquitin at 298K compiled using the CoMAND method Descriptor: Polyubiquitin-B Authors: ElGamacy, M, Truffault, V, Zhu, H, Coles, M. Deposit date: 2019-01-09 Release date: 2019-04-10 Last modified: 2019-05-15 Method: SOLUTION NMR Cite: Mapping Local Conformational Landscapes of Proteins in Solution. Structure, 27, 2019
3ZLZ	Lys6-linked tri-ubiquitin Descriptor: UBIQUITIN, ZINC ION Authors: Hospenthal, M.K, Freund, S.M.V, Komander, D. Deposit date: 2013-02-04 Release date: 2013-04-10 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Assembly, Analysis and Architecture of Atypical Ubiquitin Chains Nat.Struct.Mol.Biol., 20, 2013
1TBE	STRUCTURE OF TETRAUBIQUITIN SHOWS HOW MULTIUBIQUITIN CHAINS CAN BE FORMED Descriptor: TETRAUBIQUITIN Authors: Cook, W.J, Jeffrey, L.C, Kasperek, E, Pickart, C.M. Deposit date: 1993-10-14 Release date: 1994-01-31 Last modified: 2019-08-14 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structure of tetraubiquitin shows how multiubiquitin chains can be formed. J.Mol.Biol., 236, 1994
4A20	Crystal structure of the Ubl domain of Mdy2 (Get5) at 1.78A Descriptor: SULFATE ION, UBIQUITIN-LIKE PROTEIN MDY2 Authors: Simon, A.C, Simpson, P.J, Murray, J.W, Isaacson, R.L. Deposit date: 2011-09-21 Release date: 2012-11-14 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Structure of the Sgt2/Get5 Complex Provides Insights Into Get-Mediated Targeting of Tail-Anchored Membrane Proteins Proc.Natl.Acad.Sci.USA, 110, 2013
1UD7	SOLUTION STRUCTURE OF THE DESIGNED HYDROPHOBIC CORE MUTANT OF UBIQUITIN, 1D7 Descriptor: PROTEIN (UBIQUITIN CORE MUTANT 1D7) Authors: Johnson, E.C, Lazar, G.A, Desjarlais, J.R, Handel, T.M. Deposit date: 1999-04-07 Release date: 1999-05-06 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure and dynamics of a designed hydrophobic core variant of ubiquitin. Structure Fold.Des., 7, 1999

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