PDB: 898 resultsInfo pagesStatus searchChemie searchBIRD

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2X1B	Structure of RNA15 RRM Descriptor: MRNA 3'-END-PROCESSING PROTEIN RNA15, PHOSPHATE ION Authors: Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A. Deposit date: 2010-01-06 Release date: 2010-02-02 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors. Nucleic Acids Res., 38, 2010
7QDD	NMR structure of Npl3 RRM1 bound to the AUCCAA RNA Descriptor: Nucleolar protein 3, RNA (5'-R(*AP*UP*CP*CP*AP*A)-3') Authors: Clery, A, Allain, F.H.-T, Moursy, A. Deposit date: 2021-11-26 Release date: 2022-10-26 Last modified: 2024-01-10 Method: SOLUTION NMR Cite: RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing. Nat Commun, 14, 2023
7QR3	Chimpanzee CPEB3 HDV-like ribozyme Descriptor: GLYCEROL, POTASSIUM ION, U1 small nuclear ribonucleoprotein A, ... Authors: Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O. Deposit date: 2022-01-10 Release date: 2022-10-26 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.18 Å) Cite: Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes Biorxiv, 2022
7QDE	NMR structure of Npl3 RRM12 bound to the AUCCAGUGGAA RNA Descriptor: Nucleolar protein 3, RNA (5'-R(*AP*UP*CP*CP*AP*GP*UP*GP*GP*AP*A)-3') Authors: Allain, F.H.-T, Clery, A, Moursy, A. Deposit date: 2021-11-26 Release date: 2022-12-21 Last modified: 2024-01-10 Method: SOLUTION NMR Cite: RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing. Nat Commun, 14, 2023
2X1A	Structure of Rna15 RRM with RNA bound (G) Descriptor: 5'-R(*GP*UP*UP*GP*UP)-3', MAGNESIUM ION, MRNA 3'-END-PROCESSING PROTEIN RNA15 Authors: Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A. Deposit date: 2010-01-06 Release date: 2010-02-02 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors. Nucleic Acids Res., 38, 2010
2X1F	Structure of Rna15 RRM with bound RNA (GU) Descriptor: 5'-R(*GP*UP*UP*GP*UP)-3', MRNA 3'-END-PROCESSING PROTEIN RNA15 Authors: Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A. Deposit date: 2010-01-06 Release date: 2010-02-02 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors. Nucleic Acids Res., 38, 2010
2XNR	Structural insights into cis element recognition of non- polyadenylated RNAs by the Nab3-RRM Descriptor: 5'-R(*UP*UP*CP*UP*UP*AP*UP*UP*CP*UP*UP*A)-3', ACETATE ION, NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 3 Authors: Lunde, B.M, Horner, M, Meinhart, A. Deposit date: 2010-08-05 Release date: 2010-09-08 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural Insights Into Cis Element Recognition of Non-Polyadenylated Rnas by the Nab3-Rrm. Nucleic Acids Res., 39, 2011
2XS2	Crystal structure of the RRM domain of mouse Deleted in azoospermia-like in complex with RNA, UUGUUCUU Descriptor: 5'-R(*UP*UP*GP*UP*UP*CP*UP*U)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2010-09-24 Release date: 2011-10-05 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Kinked beta-strands mediate high-affinity recognition of mRNA targets by the germ-cell regulator DAZL. Proc. Natl. Acad. Sci. U.S.A., 108, 2011
2XS7	Crystal structure of the RRM domain of mouse Deleted in azoospermia- like in complex with Sycp3 RNA, UUGUUU Descriptor: 5'-R(*UP*UP*GP*UP*UP*UP)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2010-09-24 Release date: 2011-10-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl Proc.Natl.Acad.Sci.USA, 108, 2011
2XNQ	Structural insights into cis element recognition of non- polyadenylated RNAs by the Nab3-RRM Descriptor: ACETATE ION, NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 3 Authors: Lunde, B.M, Horner, M, Meinhart, A. Deposit date: 2010-08-05 Release date: 2010-09-08 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structural Insights Into Cis Element Recognition of Non-Polyadenylated Rnas by the Nab3-Rrm. Nucleic Acids Res., 39, 2011
2XS5	Crystal structure of the RRM domain of mouse Deleted in azoospermia- like in complex with Mvh RNA, UGUUC Descriptor: 5'-R(*UP*GP*UP*UP*CP)-3', DELETED IN AZOOSPERMIA-LIKE, DI(HYDROXYETHYL)ETHER Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2010-09-24 Release date: 2011-10-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl Proc.Natl.Acad.Sci.USA, 108, 2011
2XSF	Crystal structure of the RRM domain of mouse Deleted in azoospermia- like Descriptor: DELETED IN AZOOSPERMIA-LIKE, GLYCEROL, SULFATE ION Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2010-09-28 Release date: 2011-10-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl Proc.Natl.Acad.Sci.USA, 108, 2011
7SN6	U2AF65 UHM BOUND TO SF3B155 ULM5 Descriptor: ISOPROPYL ALCOHOL, Splicing factor 3B subunit 1, Splicing factor U2AF 65 kDa subunit Authors: Loerch, S, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2021-10-27 Release date: 2022-07-27 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A UHM-ULM interface with unusual structural features contributes to U2AF2 and SF3B1 association for pre-mRNA splicing. J.Biol.Chem., 298, 2022
2YH1	Model of human U2AF65 tandem RRM1 and RRM2 domains with eight-site uridine binding Descriptor: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP)-3', SPLICING FACTOR U2AF 65 KDA SUBUNIT Authors: Mackereth, C.D, Madl, T, Simon, B, Zanier, K, Gasch, A, Sattler, M. Deposit date: 2011-04-26 Release date: 2011-07-20 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Multi-Domain Conformational Selection Underlies Pre-Mrna Splicing Regulation by U2Af Nature, 475, 2011
2YH0	Solution structure of the closed conformation of human U2AF65 tandem RRM1 and RRM2 domains Descriptor: SPLICING FACTOR U2AF 65 KDA SUBUNIT Authors: Mackereth, C.D, Madl, T, Simon, B, Zanier, K, Gasch, A, Sattler, M. Deposit date: 2011-04-26 Release date: 2011-07-20 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Multi-Domain Conformational Selection Underlies Pre-Mrna Splicing Regulation by U2Af Nature, 475, 2011
7S3A	Crystal structure of intact U2AF65 RRM-region bound to AdML-C5 oligonucleotide Descriptor: DNA/RNA (5'-R(P*UP*UP*(UD)P*CP*U)-D(P*(BRU))-R(P*CP*C)-3'), SODIUM ION, Splicing factor U2AF 65 kDa subunit Authors: Jenkins, J.L, Henderson, S, Kielkopf, C.L. Deposit date: 2021-09-05 Release date: 2022-05-25 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.48 Å) Cite: Pre-mRNA splicing factor U2AF2 recognizes distinct conformations of nucleotide variants at the center of the pre-mRNA splice site signal. Nucleic Acids Res., 50, 2022
7S3B	Crystal structure of intact U2AF65 RRM-region bound to AdML-G5 oligonucleotide Descriptor: DI(HYDROXYETHYL)ETHER, DNA/RNA (5'-R(P*UP*UP*(UD)P*GP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit Authors: Jenkins, J.L, Henderson, S, Kielkopf, C.L. Deposit date: 2021-09-05 Release date: 2022-05-25 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.89 Å) Cite: Pre-mRNA splicing factor U2AF2 recognizes distinct conformations of nucleotide variants at the center of the pre-mRNA splice site signal. Nucleic Acids Res., 50, 2022
7S3C	Crystal structure of intact U2AF65 RRM-region bound to AdML-A5 oligonucleotide Descriptor: DNA/RNA (5'-R(P*UP*UP*(UD)P*AP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit Authors: Glasser, E, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2021-09-05 Release date: 2022-05-25 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Pre-mRNA splicing factor U2AF2 recognizes distinct conformations of nucleotide variants at the center of the pre-mRNA splice site signal. Nucleic Acids Res., 50, 2022
2YWK	Crystal structure of RRM-domain derived from human putative RNA-binding protein 11 Descriptor: Putative RNA-binding protein 11 Authors: Kawazoe, M, Takemoto, C, Kaminishi, T, Uchikubo-Kamo, T, Nishino, A, Morita, S, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-20 Release date: 2008-04-22 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Crystal structure of RRM-domain derived from human putative RNA-binding protein 11 To be Published
2YTC	Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22 Descriptor: Pre-mRNA-splicing factor RBM22 Authors: Kasahara, N, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2007-10-09 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22 To be Published
2YKA	RRM domain of mRNA export adaptor REF2-I bound to HVS ORF57 peptide Descriptor: 52 KDA IMMEDIATE-EARLY PHOSPHOPROTEIN, RNA AND EXPORT FACTOR-BINDING PROTEIN 2 Authors: Tunnicliffe, R.B, Hautbergue, G.M, Kalra, P, Wilson, S.A, Golovanov, A.P. Deposit date: 2011-05-26 Release date: 2012-06-13 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Competitive and Cooperative Interactions Mediate RNA Transfer from Herpesvirus Saimiri Orf57 to the Mammalian Export Adaptor Alyref. Plos Pathog., 10, 2014
3B4D	Crystal Structure of Human PABPN1 RRM Descriptor: Polyadenylate-binding protein 2 Authors: Ge, H, Tong, S, Teng, M, Niu, L. Deposit date: 2007-10-24 Release date: 2008-01-15 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.001 Å) Cite: Crystal structure and possible dimerization of the single RRM of human PABPN1 Proteins, 71, 2008
3B4M	Crystal Structure of Human PABPN1 RRM Descriptor: Polyadenylate-binding protein 2 Authors: Ge, H, Zhou, D, Teng, M, Niu, L. Deposit date: 2007-10-24 Release date: 2008-01-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.82 Å) Cite: Crystal structure and possible dimerization of the single RRM of human PABPN1 Proteins, 71, 2008
6Z29	Structure of eIF4G1 (37-49) - PUB1 RRM3 chimera in solution Descriptor: Eukaryotic initiation factor 4F subunit p150,Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 Authors: Chaves-Arquero, B, Martinez-Lumbreras, S, Perez-Canadillas, J.M. Deposit date: 2020-05-15 Release date: 2021-05-26 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: eIF4G1 N-terminal intrinsically disordered domain is a multi-docking station for RNA, Pab1, Pub1, and self-assembly. Front Mol Biosci, 9, 2022
7AAO	Structural evolution of the tissue-specific U2AF2 paralog and alternative splicing factor LS2 Descriptor: U2 snRNP auxiliary factor large subunit Authors: Kawale, A.A, Kang, H.S, Sattler, M. Deposit date: 2020-09-04 Release date: 2021-10-06 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Structural evolution of the tissue-specific U2AF2 paralog and alternative splicing factor LS2 To Be Published

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