Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1CHH
DownloadVisualize
BU of 1chh by Molmil
STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Lo, T.P, Brayer, G.D.
Deposit date:1994-06-01
Release date:1994-12-20
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural studies of the roles of residues 82 and 85 at the interactive face of cytochrome c.
Biochemistry, 34, 1995
1CYC
DownloadVisualize
BU of 1cyc by Molmil
THE CRYSTAL STRUCTURE OF BONITO (KATSUO) FERROCYTOCHROME C AT 2.3 ANGSTROMS RESOLUTION. II. STRUCTURE AND FUNCTION
Descriptor: FERROCYTOCHROME C, HEME C
Authors:Tanaka, N, Yamane, T, Tsukihara, T, Ashida, T, Kakudo, M.
Deposit date:1976-08-01
Release date:1976-10-06
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of bonito (katsuo) ferrocytochrome c at 2.3 A resolution. II. Structure and function.
J.Biochem.(Tokyo), 77, 1975
1CRC
DownloadVisualize
BU of 1crc by Molmil
CYTOCHROME C AT LOW IONIC STRENGTH
Descriptor: CYTOCHROME C, HEME C
Authors:Sanishvili, R, Volz, K.W, Westbrook, E.M, Margoliash, E.
Deposit date:1995-03-22
Release date:1996-03-08
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The low ionic strength crystal structure of horse cytochrome c at 2.1 A resolution and comparison with its high ionic strength counterpart.
Structure, 3, 1995
1CIG
DownloadVisualize
BU of 1cig by Molmil
STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Lo, T.P, Brayer, G.D.
Deposit date:1994-09-26
Release date:1995-01-26
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional effects of multiple mutations at distal sites in cytochrome c.
Biochemistry, 34, 1995
1CO6
DownloadVisualize
BU of 1co6 by Molmil
CRYSTAL STRUCTURE OF FERROCYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor: HEME C, PROTEIN (CYTOCHROME C2)
Authors:Miki, K, Sogabe, S.
Deposit date:1999-06-05
Release date:1999-06-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Refined crystal structure of ferrocytochrome c2 from Rhodopseudomonas viridis at 1.6 A resolution.
J.Mol.Biol., 252, 1995
1COR
DownloadVisualize
BU of 1cor by Molmil
INVESTIGATION OF THE SOLUTION CONFORMATION OF CYTOCHROME C-551 FROM PSEUDOMONAS STUTZERI
Descriptor: CYTOCHROME C551, HEME C
Authors:Cai, M, Bradford, E.G, Timkovich, R.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2021-03-10
Method:SOLUTION NMR
Cite:Investigation of the solution conformation of cytochrome c-551 from Pseudomonas stutzeri.
Biochemistry, 31, 1992
1CRH
DownloadVisualize
BU of 1crh by Molmil
THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Berghuis, A.M, Brayer, G.D.
Deposit date:1993-08-06
Release date:1994-01-31
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c.
J.Mol.Biol., 236, 1994
1ETP
DownloadVisualize
BU of 1etp by Molmil
CRYSTAL STRUCTURE OF CYTOCHROME C4 FROM PSEUDOMONAS STUTZERI
Descriptor: CYTOCHROME C4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kadziola, A, Larsen, S.
Deposit date:1996-01-23
Release date:1997-02-12
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the dihaem cytochrome c4 from Pseudomonas stutzeri determined at 2.2A resolution.
Structure, 5, 1997
5IY5
DownloadVisualize
BU of 5iy5 by Molmil
Electron transfer complex of cytochrome c and cytochrome c oxidase at 2.0 angstrom resolution
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Shimada, S, Baba, J, Aoe, S, Shimada, A, Yamashita, E, Tsukihara, T.
Deposit date:2016-03-24
Release date:2017-01-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Complex structure of cytochrome c-cytochrome c oxidase reveals a novel protein-protein interaction mode
EMBO J., 36, 2017
1WEJ
DownloadVisualize
BU of 1wej by Molmil
IGG1 FAB FRAGMENT (OF E8 ANTIBODY) COMPLEXED WITH HORSE CYTOCHROME C AT 1.8 A RESOLUTION
Descriptor: CYTOCHROME C, E8 ANTIBODY, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mylvaganam, S.E, Paterson, Y, Getzoff, E.D.
Deposit date:1998-03-26
Release date:1998-12-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the binding of an anti-cytochrome c antibody to its antigen: crystal structures of FabE8-cytochrome c complex to 1.8 A resolution and FabE8 to 2.26 A resolution.
J.Mol.Biol., 281, 1998
4GED
DownloadVisualize
BU of 4ged by Molmil
Crystal Structure of the Leishmania Major Peroxidase-Cytochrome C Complex
Descriptor: Ascorbate peroxidase, Cytochrome c, HEME C, ...
Authors:Jasion, V.S, Doukov, T, Pineda, S.H, Li, H, Poulos, T.L.
Deposit date:2012-08-01
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of the Leishmania major peroxidase-cytochrome c complex.
Proc.Natl.Acad.Sci.USA, 109, 2012
2VHD
DownloadVisualize
BU of 2vhd by Molmil
Crystal Structure Of The Di-Haem Cytochrome C Peroxidase From Pseudomonas aeruginosa - Mixed Valence Form
Descriptor: CALCIUM ION, CYTOCHROME C551 PEROXIDASE, HEME C
Authors:Echalier, A, Brittain, T, Wright, J, Boycheva, S, Mortuza, G.B, Fulop, V, Watmough, N.J.
Deposit date:2007-11-20
Release date:2008-02-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Redox-Linked Structural Changes Associated with the Formation of a Catalytically Competent Form of the Diheme Cytochrome C Peroxidase from Pseudomonas Aeruginosa
Biochemistry, 47, 2008
2FWL
DownloadVisualize
BU of 2fwl by Molmil
The cytochrome c552/CuA complex from Thermus thermophilus
Descriptor: Cytochrome c oxidase subunit II, Cytochrome c-552, DINUCLEAR COPPER ION, ...
Authors:Muresanu, L, Pristovsek, P, Loehr, F, Maneg, O, Mukrasch, M.D, Rueterjans, H, Ludwig, B, Luecke, C.
Deposit date:2006-02-02
Release date:2006-03-28
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The electron transfer complex between cytochrome c552 and the CuA domain of the Thermus thermophilus ba3 oxidase - a combined NMR and computational approach
J.Biol.Chem., 281, 2006
5GUX
DownloadVisualize
BU of 5gux by Molmil
Cytochrome c-dependent nitric oxide reductase (cNOR) from Pseudomonas aeruginosa in complex with xenon
Descriptor: Antibody fab fragment heavy chain, Antibody fab fragment light chain, CALCIUM ION, ...
Authors:Ishii, S, Terasaka, E, Sugimoto, H, Shiro, Y, Tosha, T.
Deposit date:2016-08-31
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Dynamics of nitric oxide controlled by protein complex in bacterial system.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5GUW
DownloadVisualize
BU of 5guw by Molmil
Complex of Cytochrome cd1 Nitrite Reductase and Nitric Oxide Reductase in Denitrification of Pseudomonas aeruginosa
Descriptor: CALCIUM ION, CHLORIDE ION, FE (III) ION, ...
Authors:Terasaka, E, Sugimoto, H, Shiro, Y, Tosha, T.
Deposit date:2016-08-31
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Dynamics of nitric oxide controlled by protein complex in bacterial system
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4AX3
DownloadVisualize
BU of 4ax3 by Molmil
Structure of three-domain heme-Cu nitrite reductase from Ralstonia pickettii at 1.6 A resolution
Descriptor: COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, HEME C
Authors:Antonyuk, S.V, Cong, H, Eady, R.R, Hasnain, S.S.
Deposit date:2012-06-07
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of protein-protein complexes involved in electron transfer.
Nature, 496, 2013
8XCM
DownloadVisualize
BU of 8xcm by Molmil
Cryo-EM Structure of Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus variant-N1146Q
Descriptor: FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Fructose dehydrogenase cytochrome subunit, ...
Authors:Fukawa, E, Miyata, T, Makino, F, Adachi, T, Suzuki, Y, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
Deposit date:2023-12-09
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structural and electrochemical elucidation of biocatalytic mechanisms in direct electron transfer-type D-fructose dehydrogenase.
Electrochim Acta, 490, 2024
8XCN
DownloadVisualize
BU of 8xcn by Molmil
Cryo-EM Structure of Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus variant-N1190A
Descriptor: FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Fructose dehydrogenase cytochrome subunit, ...
Authors:Fukawa, E, Miyata, T, Makino, F, Adachi, T, Suzuki, Y, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
Deposit date:2023-12-09
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Structural and electrochemical elucidation of biocatalytic mechanisms in direct electron transfer-type D-fructose dehydrogenase.
Electrochim Acta, 490, 2024
8ED4
DownloadVisualize
BU of 8ed4 by Molmil
Structure of the complex between the arsenite oxidase and its native electron acceptor cytochrome c552 from Pseudorhizobium sp. str. NT-26
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, AroA, AroB, ...
Authors:Maher, M.J, Poddar, N.
Deposit date:2022-09-03
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The structure of the complex between the arsenite oxidase from Pseudorhizobium banfieldiae sp. strain NT-26 and its native electron acceptor cytochrome c 552.
Acta Crystallogr D Struct Biol, 79, 2023
6HWH
DownloadVisualize
BU of 6hwh by Molmil
Structure of a functional obligate respiratory supercomplex from Mycobacterium smegmatis
Descriptor: CARDIOLIPIN, COPPER (II) ION, Co-purified unknown peptide built as polyALA, ...
Authors:Wiseman, B, Nitharwal, R.G, Fedotovskaya, O, Schafer, J, Guo, H, Kuang, Q, Benlekbir, S, Sjostrand, D, Adelroth, P, Rubinstein, J.L, Brzezinski, P, Hogbom, M.
Deposit date:2018-10-12
Release date:2018-11-07
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of a functional obligate complex III2IV2respiratory supercomplex from Mycobacterium smegmatis.
Nat. Struct. Mol. Biol., 25, 2018
5WVE
DownloadVisualize
BU of 5wve by Molmil
Apaf-1-Caspase-9 holoenzyme
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Apoptotic protease-activating factor 1, Caspase, ...
Authors:Li, Y, Zhou, M, Hu, Q, Shi, Y.
Deposit date:2016-12-24
Release date:2017-02-08
Last modified:2017-03-01
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Mechanistic insights into caspase-9 activation by the structure of the apoptosome holoenzyme
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8JEK
DownloadVisualize
BU of 8jek by Molmil
Cryo-EM Structure of K-ferricyanide Oxidized Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus
Descriptor: FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Fructose dehydrogenase cytochrome subunit, ...
Authors:Suzuki, Y, Miyata, T, Makino, F, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
Deposit date:2023-05-16
Release date:2023-10-25
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Essential Insight of Direct Electron Transfer-Type Bioelectrocatalysis by Membrane-Bound d-Fructose Dehydrogenase with Structural Bioelectrochemistry.
Acs Catalysis, 13, 2023
8JEJ
DownloadVisualize
BU of 8jej by Molmil
Cryo-EM Structure of Na-dithionite Reduced Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus
Descriptor: FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Fructose dehydrogenase cytochrome subunit, ...
Authors:Suzuki, Y, Miyata, T, Makino, F, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
Deposit date:2023-05-16
Release date:2023-10-25
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Essential Insight of Direct Electron Transfer-Type Bioelectrocatalysis by Membrane-Bound d-Fructose Dehydrogenase with Structural Bioelectrochemistry.
Acs Catalysis, 13, 2023
7E1V
DownloadVisualize
BU of 7e1v by Molmil
Cryo-EM structure of apo hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, CARDIOLIPIN, ...
Authors:Zhou, S, Wang, W, Gao, Y, Gong, H, Rao, Z.
Deposit date:2021-02-03
Release date:2021-10-13
Last modified:2022-07-27
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates.
Elife, 10, 2021
7E1W
DownloadVisualize
BU of 7e1w by Molmil
Cryo-EM structure of hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV in the presence of Q203
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, 6-chloranyl-2-ethyl-N-[[4-[4-[4-(trifluoromethyloxy)phenyl]piperidin-1-yl]phenyl]methyl]imidazo[1,2-a]pyridine-3-carboxamide, ...
Authors:Zhou, S, Wang, W, Gao, Y, Gong, H, Rao, Z.
Deposit date:2021-02-03
Release date:2021-10-27
Last modified:2022-07-27
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates.
Elife, 10, 2021

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon