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PDB: 98 results

5D0K
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BU of 5d0k by Molmil
Structure of UbE2D2:RNF165:Ub complex
Descriptor: Polyubiquitin-B, RING finger protein 165, Ubiquitin-conjugating enzyme E2 D2, ...
Authors:Wright, J.D, Day, C.L, Mace, P.D.
Deposit date:2015-08-03
Release date:2015-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Secondary ubiquitin-RING docking enhances Arkadia and Ark2C E3 ligase activity.
Nat.Struct.Mol.Biol., 23, 2016
5D0I
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BU of 5d0i by Molmil
Structure of RING finger protein 165
Descriptor: RING finger protein 165, SULFATE ION, ZINC ION
Authors:Wright, J.D, Day, C.L, Mace, P.D.
Deposit date:2015-08-03
Release date:2015-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Secondary ubiquitin-RING docking enhances Arkadia and Ark2C E3 ligase activity.
Nat.Struct.Mol.Biol., 23, 2016
5D0M
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BU of 5d0m by Molmil
Structure of UbE2D2:RNF165:Ub complex
Descriptor: PHOSPHATE ION, Polyubiquitin-B, RING finger protein 165, ...
Authors:Wright, J.D, Day, C.L, Mace, P.D.
Deposit date:2015-08-03
Release date:2015-12-09
Last modified:2016-01-20
Method:X-RAY DIFFRACTION (1.913 Å)
Cite:Secondary ubiquitin-RING docking enhances Arkadia and Ark2C E3 ligase activity.
Nat.Struct.Mol.Biol., 23, 2016
8C46
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BU of 8c46 by Molmil
N-Carbamoyl-beta-Alanine Amidohydrolases from Rhizobium radiobacter MDC 8606
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, N-carbamoyl-beta-alanine amidohydrolase, ZINC ION
Authors:Basle, A, Marles-Wright, J.
Deposit date:2023-01-02
Release date:2023-09-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and biochemical characterisation of the N-carbamoyl-beta-alanine amidohydrolase from Rhizobium radiobacter MDC 8606.
Febs J., 290, 2023
8DFA
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BU of 8dfa by Molmil
type I-C Cascade bound to ssDNA target
Descriptor: CRISPR-associated protein, CT1133 family, TM1801 family, ...
Authors:O'Brien, R.E, Bravo, J.P.K, Ramos, D, Hibshman, G.N, Wright, J.T, Taylor, D.W.
Deposit date:2022-06-21
Release date:2023-02-22
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Mol.Cell, 83, 2023
8DFO
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BU of 8dfo by Molmil
type I-C Cascade bound to AcrIC4
Descriptor: AcrIC4, CRISPR-associated protein, CT1133 family, ...
Authors:O'Brien, R.E, Bravo, J.P.K, Ramos, D, Hibshman, G.N, Wright, J.T, Taylor, D.W.
Deposit date:2022-06-22
Release date:2023-02-15
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Mol.Cell, 83, 2023
8DEX
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BU of 8dex by Molmil
type I-C Cascade
Descriptor: CRISPR-associated protein, CT1133 family, TM1801 family, ...
Authors:O'Brien, R.E, Bravo, J.P.K, Ramos, D, Hibshman, G.N, Wright, J.T, Taylor, D.W.
Deposit date:2022-06-21
Release date:2023-02-15
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Mol.Cell, 83, 2023
8DEJ
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BU of 8dej by Molmil
D. vulgaris type I-C Cascade bound to dsDNA target
Descriptor: CRISPR-associated protein, CT1133 family, TM1801 family, ...
Authors:O'Brien, R.E, Bravo, J.P.K, Ramos, D, Hibshman, G.N, Wright, J.T, Taylor, D.W.
Deposit date:2022-06-20
Release date:2023-02-22
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Mol.Cell, 83, 2023
8DFS
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BU of 8dfs by Molmil
type I-C Cascade bound to AcrIF2
Descriptor: Anti-CRISPR protein 30, CRISPR-associated protein, CT1133 family, ...
Authors:O'Brien, R.E, Bravo, J.P.K, Ramos, D, Hibshman, G.N, Wright, J.T, Taylor, D.W.
Deposit date:2022-06-22
Release date:2023-02-22
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Mol.Cell, 83, 2023
2XCN
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BU of 2xcn by Molmil
Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: MAGNESIUM ION, N-[(CYCLOPENTYLOXY)CARBONYL]-3-METHYL-L-VALYL-(4R)-N-{(1R)-3-HYDROXY-1-[HYDROXY(OXIDO)BORANYL]PROPYL}-4-(ISOQUINOLIN-1-YLOXY)-L-PROLINAMIDE, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-23
Release date:2010-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
2XCF
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BU of 2xcf by Molmil
Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: CYCLOPENTYL N-[(2S)-1-[(2S,4R)-2-[[(4R)-8-HYDROXY-1,6,10-TRIOXA-5$L^{4}-BORASPIRO[4.5]DECAN-4-YL]CARBAMOYL]-4-ISOQUINOLIN-1-YLOXY-PYRROLIDIN-1-YL]-3,3-DIMETHYL-1-OXO-BUTAN-2-YL]CARBAMATE, MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-22
Release date:2010-06-02
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
2XNI
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BU of 2xni by Molmil
Protein-ligand complex of a novel macrocyclic HCV NS3 protease inhibitor derived from amino cyclic boronates
Descriptor: (1-{[(10-tert-butyl-15,15-dimethyl-3,9,12-trioxo-6,7,9,10,11,12,14,15,16,17,18,19,23,23a-tetradecahydro-1H,5H-2,23:5,8-dimethano-4,13,2,8,11-benzodioxatriazacyclohenicosin-7(3H)-yl)carbonyl]amino}-3-hydroxypropyl)(trihydroxy)borate(1-), MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Zhou, Y, Li, Q, Plattner, J.J, Baker, S.J, Zhang, S, Kazmierski, W.M, Wright, L.L, Smith, G.K, Grimes, R.M, Crosby, R.M, Creech, K.L, Carballo, L.H, Slater, M.J, Jarvest, R.L, Thommes, P, Hubbard, J.A, Convery, M.A, Nassau, P.M, McDowell, W, Skarzynski, T.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, Pennicott, L.E, Zou, W, Wright, J.
Deposit date:2010-08-02
Release date:2011-08-17
Last modified:2012-09-26
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Novel Macrocyclic Hcv Ns3 Protease Inhibitors Derived from Alpha-Amino Cyclic Boronates.
Bioorg.Med.Chem.Lett., 20, 2010
7POC
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BU of 7poc by Molmil
An Irreversible, Promiscuous and Highly Thermostable Claisen-Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles
Descriptor: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase, PYRIDOXAL-5'-PHOSPHATE
Authors:Basle, A, Ashley, B, Campopiano, D, Marles-Wright, J.
Deposit date:2021-09-08
Release date:2022-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Versatile Chemo-Biocatalytic Cascade Driven by a Thermophilic and Irreversible C-C Bond-Forming alpha-Oxoamine Synthase.
Acs Sustain Chem Eng, 11, 2023
7POB
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BU of 7pob by Molmil
An Irreversible, Promiscuous and Highly Thermostable Claisen-Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles
Descriptor: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION
Authors:Basle, A, Ashley, B, Campopiano, D, Marles-Wright, J.
Deposit date:2021-09-08
Release date:2022-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Versatile Chemo-Biocatalytic Cascade Driven by a Thermophilic and Irreversible C-C Bond-Forming alpha-Oxoamine Synthase.
Acs Sustain Chem Eng, 11, 2023
4TQX
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BU of 4tqx by Molmil
Molecular Basis of Streptococcus mutans Sortase A Inhibition by Chalcone.
Descriptor: ACETIC ACID, SULFATE ION, Sortase, ...
Authors:Wallock-Richards, D.J, Marles-Wright, J, Clarke, D.J, Maitra, A, Dodds, M, Hanley, B, Campopiano, D.J.
Deposit date:2014-06-12
Release date:2015-05-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Molecular basis of Streptococcus mutans sortase A inhibition by the flavonoid natural product trans-chalcone.
Chem.Commun.(Camb.), 51, 2015
6SV1
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BU of 6sv1 by Molmil
Crystal structure of Rhodospirillum rubrum Rru_A0973 E34A variant
Descriptor: CALCIUM ION, Encapsulated Ferritin, FE (III) ION
Authors:Marles-Wright, J, He, D.
Deposit date:2019-09-17
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Dissecting the structural and functional roles of a putative metal entry site in encapsulated ferritins.
J.Biol.Chem., 295, 2020
5K1R
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BU of 5k1r by Molmil
Structure of Burkholderia pseudomallei K96243 sphingosine-1-phosphate lyase Bpss2021
Descriptor: Burkholderia pseudomallei sphingosine-1-phosphate lyase Bpss2021, PYRIDOXAL-5'-PHOSPHATE
Authors:Mclean, C.J, Campopiano, D.J, Marles-Wright, J.
Deposit date:2016-05-18
Release date:2016-11-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Characterization of homologous sphingosine-1-phosphate lyase isoforms in the bacterial pathogen Burkholderia pseudomallei.
J. Lipid Res., 58, 2017
7POA
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BU of 7poa by Molmil
An Irreversible, Promiscuous and Highly Thermostable Claisen-Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Basle, A, Ashley, B, Campopiano, D, Marles-Wright, J.
Deposit date:2021-09-08
Release date:2022-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Versatile Chemo-Biocatalytic Cascade Driven by a Thermophilic and Irreversible C-C Bond-Forming alpha-Oxoamine Synthase.
Acs Sustain Chem Eng, 11, 2023
5L8G
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BU of 5l8g by Molmil
Crystal structure of Rhodospirillum rubrum Rru_A0973 mutant H65A
Descriptor: CALCIUM ION, Uncharacterized protein
Authors:He, D, Hughes, S, Vanden-Hehir, S, Georgiev, A, Altenbach, K, Tarrant, E, Mackay, C.L, Waldron, K.J, Clarke, D.J, Marles-Wright, J.
Deposit date:2016-06-07
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.974 Å)
Cite:Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
Elife, 5, 2016
7OE2
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BU of 7oe2 by Molmil
Model of closed pentamer of the Haliangium ochraceum encapsulin from symmetry expansion of icosahedral single particle reconstruction
Descriptor: Haliangium ochraceum Encapsulated ferritin localisation sequence, Linocin_M18 bacteriocin protein
Authors:Marles-Wright, J, Basle, A, Clarke, D.J, Ross, J.
Deposit date:2021-05-01
Release date:2022-02-09
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Pore dynamics and asymmetric cargo loading in an encapsulin nanocompartment.
Sci Adv, 8, 2022
7ODW
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BU of 7odw by Molmil
Model of Haliangium ochraceum encapsulin from icosahedral single particle reconstruction
Descriptor: Linocin_M18 bacteriocin protein
Authors:Marles-Wright, J, Basle, A, Clarke, D.J, Ross, J.
Deposit date:2021-04-30
Release date:2022-03-09
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Pore dynamics and asymmetric cargo loading in an encapsulin nanocompartment.
Sci Adv, 8, 2022
5L8B
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BU of 5l8b by Molmil
Crystal structure of Rhodospirillum rubrum Rru_A0973 mutant E62A
Descriptor: CALCIUM ION, Uncharacterized protein
Authors:He, D, Hughes, S, Vanden-Hehir, S, Georgiev, A, Altenbach, K, Tarrant, E, Mackay, C.L, Waldron, K.J, Clarke, D.J, Marles-Wright, J.
Deposit date:2016-06-07
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
Elife, 5, 2016
5N5F
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BU of 5n5f by Molmil
Crystal structure of Haliangium ochraceum encapsulated ferritin
Descriptor: SODIUM ION, encapsulated ferritin
Authors:Marles-Wright, J, He, D.
Deposit date:2017-02-13
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.057 Å)
Cite:Conservation of the structural and functional architecture of encapsulated ferritins in bacteria and archaea.
Biochem.J., 476, 2019
5N5E
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BU of 5n5e by Molmil
Crystal structure of encapsulated ferritin domain from Pyrococcus furiosus PFC_05175
Descriptor: FE (III) ION, PFC_05175
Authors:Marles-Wright, J, He, D.
Deposit date:2017-02-13
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.026 Å)
Cite:Conservation of the structural and functional architecture of encapsulated ferritins in bacteria and archaea.
Biochem.J., 476, 2019
5L89
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BU of 5l89 by Molmil
Crystal structure of Rhodospirillum rubrum Rru_A0973 mutant E32A
Descriptor: CALCIUM ION, Rru_A0973
Authors:He, D, Hughes, S, Vanden-Hehir, S, Georgiev, A, Altenbach, K, Tarrant, E, Mackay, C.L, Waldron, K.J, Clarke, D.J, Marles-Wright, J.
Deposit date:2016-06-07
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
Elife, 5, 2016

 

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