PDB: 909 resultsInfo pagesStatus searchChemie searchBIRD

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3FEX	Crystal structure of the CBC-importin alpha complex. Descriptor: Importin subunit alpha-2, Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2 Authors: Dias, S.M.G, Ambrosio, A.L.B, Cerione, R.A. Deposit date: 2008-12-01 Release date: 2009-08-11 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.549 Å) Cite: The molecular basis for the regulation of the cap-binding complex by the importins. Nat.Struct.Mol.Biol., 16, 2009
3EX7	The crystal structure of EJC in its transition state Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Eukaryotic initiation factor 4A-III, ... Authors: Andersen, G.R, Nielsen, K.H. Deposit date: 2008-10-16 Release date: 2008-12-09 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.301 Å) Cite: Mechanism of ATP turnover inhibition in the EJC Rna, 15, 2009
3EGZ	Crystal structure of an in vitro evolved tetracycline aptamer and artificial riboswitch Descriptor: 7-CHLOROTETRACYCLINE, MAGNESIUM ION, Tetracycline aptamer and artificial riboswitch, ... Authors: Xiao, H, Edwards, T.E, Ferre-D'Amare, A.R. Deposit date: 2008-09-11 Release date: 2008-10-28 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural basis for specific, high-affinity tetracycline binding by an in vitro evolved aptamer and artificial riboswitch Chem.Biol., 15, 2008
3EGN	C-terminal RNA Recognition Motif of the U11/U12 65K Protein Descriptor: RNA-binding protein 40 Authors: Netter, C, Wahl, M.C. Deposit date: 2008-09-11 Release date: 2009-06-09 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Functional stabilization of an RNA recognition motif by a noncanonical N-terminal expansion Rna, 15, 2009
3D2W	Crystal structure of mouse TDP-43 RRM2 domain in complex with DNA Descriptor: DNA (5'-D(*DGP*DTP*DTP*DGP*DAP*DGP*DCP*DGP*DTP*DT)-3'), PHOSPHATE ION, TAR DNA-binding protein 43 Authors: Kuo, P.H, Yuan, H.S. Deposit date: 2008-05-09 Release date: 2009-04-07 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural insights into TDP-43 in nucleic-acid binding and domain interactions Nucleic Acids Res., 37, 2009
3CW1	Crystal Structure of Human Spliceosomal U1 snRNP Descriptor: Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein G, ... Authors: Pomeranz Krummel, D.A, Oubridge, C, Leung, A.K, Li, J, Nagai, K. Deposit date: 2008-04-21 Release date: 2009-03-24 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (5.493 Å) Cite: Crystal structure of human spliceosomal U1 snRNP at 5.5 A resolution. Nature, 458, 2009
3CUN	Aminoacyl-tRNA synthetase ribozyme Descriptor: COBALT (II) ION, MAGNESIUM ION, POTASSIUM ION, ... Authors: Xiao, H, Murakami, H, Suga, H, Ferre-D'Amare, A.R. Deposit date: 2008-04-16 Release date: 2008-06-24 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme. Nature, 454, 2008
3CUL	Aminoacyl-tRNA synthetase ribozyme Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (92-MER), ... Authors: Xiao, H, Murakami, H, Suga, H, Ferre-D'Amare, A.R. Deposit date: 2008-04-16 Release date: 2008-06-24 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme. Nature, 454, 2008
3BS9	X-ray structure of human TIA-1 RRM2 Descriptor: IODIDE ION, Nucleolysin TIA-1 isoform p40 Authors: Kumar, A.O, Kielkopf, C.L. Deposit date: 2007-12-22 Release date: 2008-01-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structure of the central RNA recognition motif of human TIA-1 at 1.95A resolution. Biochem.Biophys.Res.Commun., 367, 2008
3BO4	A relaxed active site following exon ligation by a group I intron Descriptor: DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*A)-D(P*DG)-3'), DNA/RNA (5'-R(*CP*A)-D(P*DU)-R(P*AP*CP*GP*GP*CP*C)-3'), Group I intron P9, ... Authors: Lipchock, S.V, Strobel, S.A. Deposit date: 2007-12-17 Release date: 2008-04-01 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.33 Å) Cite: A relaxed active site after exon ligation by the group I intron Proc.Natl.Acad.Sci.Usa, 105, 2008
3BO3	A relaxed active site following exon ligation by a group I intron Descriptor: Group I intron P9, MAGNESIUM ION, POTASSIUM ION, ... Authors: Lipchock, S.V, Strobel, S.A. Deposit date: 2007-12-17 Release date: 2008-04-01 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.4 Å) Cite: A relaxed active site after exon ligation by the group I intron Proc.Natl.Acad.Sci.Usa, 105, 2008
3BO2	A relaxed active site following exon ligation by a group I intron Descriptor: Group I intron P9, MAGNESIUM ION, RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*G)-3'), ... Authors: Lipchock, S.V, Strobel, S.A. Deposit date: 2007-12-17 Release date: 2008-04-01 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.31 Å) Cite: A relaxed active site after exon ligation by the group I intron Proc.Natl.Acad.Sci.Usa, 105, 2008
3BEG	Crystal structure of SR protein kinase 1 complexed to its substrate ASF/SF2 Descriptor: ALANINE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PHOSPHOSERINE, ... Authors: Ngo, J.C, Giang, K, Chakrabarti, S, Ma, C.-T, Huynh, N, Hagopian, J, Dorrestein, P.C, Fu, X.-D, Adams, J.A, Ghosh, G. Deposit date: 2007-11-18 Release date: 2008-04-01 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.9 Å) Cite: A sliding docking interaction is essential for sequential and processive phosphorylation of an SR protein by SRPK1 Mol.Cell, 29, 2008
3B4M	Crystal Structure of Human PABPN1 RRM Descriptor: Polyadenylate-binding protein 2 Authors: Ge, H, Zhou, D, Teng, M, Niu, L. Deposit date: 2007-10-24 Release date: 2008-01-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.82 Å) Cite: Crystal structure and possible dimerization of the single RRM of human PABPN1 Proteins, 71, 2008
3B4D	Crystal Structure of Human PABPN1 RRM Descriptor: Polyadenylate-binding protein 2 Authors: Ge, H, Tong, S, Teng, M, Niu, L. Deposit date: 2007-10-24 Release date: 2008-01-15 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.001 Å) Cite: Crystal structure and possible dimerization of the single RRM of human PABPN1 Proteins, 71, 2008
2YWK	Crystal structure of RRM-domain derived from human putative RNA-binding protein 11 Descriptor: Putative RNA-binding protein 11 Authors: Kawazoe, M, Takemoto, C, Kaminishi, T, Uchikubo-Kamo, T, Nishino, A, Morita, S, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-20 Release date: 2008-04-22 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Crystal structure of RRM-domain derived from human putative RNA-binding protein 11 To be Published
2YTC	Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22 Descriptor: Pre-mRNA-splicing factor RBM22 Authors: Kasahara, N, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2007-10-09 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22 To be Published
2YKA	RRM domain of mRNA export adaptor REF2-I bound to HVS ORF57 peptide Descriptor: 52 KDA IMMEDIATE-EARLY PHOSPHOPROTEIN, RNA AND EXPORT FACTOR-BINDING PROTEIN 2 Authors: Tunnicliffe, R.B, Hautbergue, G.M, Kalra, P, Wilson, S.A, Golovanov, A.P. Deposit date: 2011-05-26 Release date: 2012-06-13 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Competitive and Cooperative Interactions Mediate RNA Transfer from Herpesvirus Saimiri Orf57 to the Mammalian Export Adaptor Alyref. Plos Pathog., 10, 2014
2YH1	Model of human U2AF65 tandem RRM1 and RRM2 domains with eight-site uridine binding Descriptor: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP)-3', SPLICING FACTOR U2AF 65 KDA SUBUNIT Authors: Mackereth, C.D, Madl, T, Simon, B, Zanier, K, Gasch, A, Sattler, M. Deposit date: 2011-04-26 Release date: 2011-07-20 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Multi-Domain Conformational Selection Underlies Pre-Mrna Splicing Regulation by U2Af Nature, 475, 2011
2YH0	Solution structure of the closed conformation of human U2AF65 tandem RRM1 and RRM2 domains Descriptor: SPLICING FACTOR U2AF 65 KDA SUBUNIT Authors: Mackereth, C.D, Madl, T, Simon, B, Zanier, K, Gasch, A, Sattler, M. Deposit date: 2011-04-26 Release date: 2011-07-20 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Multi-Domain Conformational Selection Underlies Pre-Mrna Splicing Regulation by U2Af Nature, 475, 2011
2XSF	Crystal structure of the RRM domain of mouse Deleted in azoospermia- like Descriptor: DELETED IN AZOOSPERMIA-LIKE, GLYCEROL, SULFATE ION Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2010-09-28 Release date: 2011-10-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl Proc.Natl.Acad.Sci.USA, 108, 2011
2XS7	Crystal structure of the RRM domain of mouse Deleted in azoospermia- like in complex with Sycp3 RNA, UUGUUU Descriptor: 5'-R(*UP*UP*GP*UP*UP*UP)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2010-09-24 Release date: 2011-10-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl Proc.Natl.Acad.Sci.USA, 108, 2011
2XS5	Crystal structure of the RRM domain of mouse Deleted in azoospermia- like in complex with Mvh RNA, UGUUC Descriptor: 5'-R(*UP*GP*UP*UP*CP)-3', DELETED IN AZOOSPERMIA-LIKE, DI(HYDROXYETHYL)ETHER Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2010-09-24 Release date: 2011-10-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl Proc.Natl.Acad.Sci.USA, 108, 2011
2XS2	Crystal structure of the RRM domain of mouse Deleted in azoospermia-like in complex with RNA, UUGUUCUU Descriptor: 5'-R(*UP*UP*GP*UP*UP*CP*UP*U)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2010-09-24 Release date: 2011-10-05 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Kinked beta-strands mediate high-affinity recognition of mRNA targets by the germ-cell regulator DAZL. Proc. Natl. Acad. Sci. U.S.A., 108, 2011
2XNR	Structural insights into cis element recognition of non- polyadenylated RNAs by the Nab3-RRM Descriptor: 5'-R(*UP*UP*CP*UP*UP*AP*UP*UP*CP*UP*UP*A)-3', ACETATE ION, NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 3 Authors: Lunde, B.M, Horner, M, Meinhart, A. Deposit date: 2010-08-05 Release date: 2010-09-08 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural Insights Into Cis Element Recognition of Non-Polyadenylated Rnas by the Nab3-Rrm. Nucleic Acids Res., 39, 2011

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