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2QJO
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crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase (NadM) complexed with ADPRP and NAD from Synechocystis sp.
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Bifunctional NMN adenylyltransferase/Nudix hydrolase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Huang, N, Sorci, L, Zhang, X, Brautigan, C, Raffaelli, N, Magni, G, Grishin, N.V, Osterman, A, Zhang, H.
Deposit date:2007-07-08
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
2Q9P
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Human diphosphoinositol polyphosphate phosphohydrolase 1, Mg-F complex
Descriptor: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, FLUORIDE ION, ...
Authors:Thorsell, A.G, Busam, R, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Holmberg-Schiavone, L, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nordlund, P, Nyman, T, Ogg, D, Sagemark, J, Sundstrom, M, Van den Berg, S, Weigelt, J, Welin, M, Persson, C, Hallberg, B.M, Structural Genomics Consortium (SGC)
Deposit date:2007-06-13
Release date:2007-09-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of human diphosphoinositol phosphatase 1.
Proteins, 77, 2009
2PQV
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Crystal structure of MutT/nudix family protein from Streptococcus pneumoniae
Descriptor: MutT/nudix family protein, PHOSPHATE ION
Authors:Chang, C, Binkowski, T.A, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-05-02
Release date:2007-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of MutT/nudix family protein from Streptococcus pneumoniae.
To be Published
2PNY
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Structure of Human Isopentenyl-diphosphate Delta-isomerase 2
Descriptor: CALCIUM ION, GLYCEROL, Isopentenyl-diphosphate Delta-isomerase 2, ...
Authors:Walker, J.R, Davis, T, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2007-04-25
Release date:2007-05-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of the human Isopentenyl-diphosphate Delta-isomerase 2.
To be Published
2O5W
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Structure of the E. coli dihydroneopterin triphosphate pyrophosphohydrolase in complex with Sm+3 and pyrophosphate
Descriptor: PYROPHOSPHATE, SAMARIUM (III) ION, SODIUM ION, ...
Authors:Gabelli, S.B, Bianchet, M.A, Amzel, L.M.
Deposit date:2006-12-06
Release date:2007-08-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function of the E. coli dihydroneopterin triphosphate pyrophosphatase: a Nudix enzyme involved in folate biosynthesis.
Structure, 15, 2007
2O5F
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Crystal Structure of DR0079 from Deinococcus radiodurans at 1.9 Angstrom Resolution
Descriptor: Putative Nudix hydrolase DR_0079
Authors:Kennedy, M.A, Buchko, G.W, Ni, S, Robinson, H.
Deposit date:2006-12-05
Release date:2007-12-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Functional and Structural Characterization of DR_0079 from Deinococcus radiodurans, a Novel Nudix Hydrolase with a Preference for Cytosine (Deoxy)ribonucleoside 5'-Di- and Triphosphates.
Biochemistry, 47, 2008
2O1C
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Structure of the E. coli dihydroneopterin triphosphate pyrophosphohydrolase
Descriptor: PYROPHOSPHATE, SULFATE ION, dATP pyrophosphohydrolase
Authors:Gabelli, S.B, Bianchet, M.A, Amzel, L.M.
Deposit date:2006-11-28
Release date:2007-08-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and function of the E. coli dihydroneopterin triphosphate pyrophosphatase: a Nudix enzyme involved in folate biosynthesis.
Structure, 15, 2007
2KDW
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Solution structure of RppH mutant E53A from Escherichia coli
Descriptor: RNA pyrophosphohydrolase
Authors:Li, H, Bi, Y, Jin, C.
Deposit date:2009-01-19
Release date:2010-01-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RppH mutant E53A from Escherichia coli
To be Published
2KDV
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Solution structure of RNA Pyrophosphohydrolase RppH from Escherichia coli
Descriptor: RNA pyrophosphohydrolase
Authors:Bi, Y, Li, H, Jin, C.
Deposit date:2009-01-19
Release date:2010-01-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RNA pyrophosphohydrolase RppH from Escherichia coli
To be Published
2JVB
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Solution Structure of Catalytic Domain of yDcp2
Descriptor: mRNA-decapping enzyme subunit 2
Authors:Deshmukh, M, Gross, J.
Deposit date:2007-09-16
Release date:2008-03-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:mRNA Decapping Is Promoted by an RNA-Binding Channel in Dcp2.
Mol.Cell, 29, 2008
2ICK
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Human isopentenyl diphophate isomerase complexed with substrate analog
Descriptor: DIMETHYLALLYL DIPHOSPHATE, Isopentenyl-diphosphate delta isomerase, MANGANESE (II) ION
Authors:Zheng, W, Bartlam, M, Rao, Z.
Deposit date:2006-09-12
Release date:2007-03-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The crystal structure of human isopentenyl diphosphate isomerase at 1.7 A resolution reveals its catalytic mechanism in isoprenoid biosynthesis
J.Mol.Biol., 366, 2007
2ICJ
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The crystal structure of human isopentenyl diphophate isomerase
Descriptor: Isopentenyl-diphosphate delta isomerase, MAGNESIUM ION, SULFATE ION
Authors:Zheng, W, Bartlam, M, Rao, Z.
Deposit date:2006-09-12
Release date:2007-03-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of human isopentenyl diphosphate isomerase at 1.7 A resolution reveals its catalytic mechanism in isoprenoid biosynthesis
J.Mol.Biol., 366, 2007
2I8U
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GDP-mannose mannosyl hydrolase-calcium-GDP product complex
Descriptor: CALCIUM ION, GDP-mannose mannosyl hydrolase, GUANOSINE-5'-DIPHOSPHATE
Authors:Zou, Y, Li, C, Brunzelle, J.S, Nair, S.K.
Deposit date:2006-09-03
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular basis for substrate selectivity and specificity by an LPS biosynthetic enzyme
Biochemistry, 46, 2007
2I8T
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GDP-mannose mannosyl hydrolase-calcium-GDP-mannose complex
Descriptor: CALCIUM ION, GDP-mannose mannosyl hydrolase, GLYCEROL, ...
Authors:Zou, Y, Li, C, Brunzelle, J.S, Nair, S.K.
Deposit date:2006-09-03
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Molecular basis for substrate selectivity and specificity by an LPS biosynthetic enzyme
Biochemistry, 46, 2007
2I6K
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Crystal structure of human type I IPP isomerase complexed with a substrate analog
Descriptor: ACETIC ACID, AMINOETHANOLPYROPHOSPHATE, Isopentenyl-diphosphate delta-isomerase 1, ...
Authors:Zhang, C, Wei, Z, Gong, W.
Deposit date:2006-08-29
Release date:2007-06-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of human IPP isomerase: new insights into the catalytic mechanism
J.Mol.Biol., 366, 2007
2GT4
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BU of 2gt4 by Molmil
Crystal Structure of the Y103F mutant of the GDP-mannose mannosyl hydrolase in complex with GDP-mannose and MG+2
Descriptor: GDP-mannose mannosyl hydrolase, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, MAGNESIUM ION, ...
Authors:Gabelli, S.B, Bianchet, M.A, Azurmendi, H.F, Mildvan, A.S, Amzel, L.A.
Deposit date:2006-04-27
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray, NMR, and mutational studies of the catalytic cycle of the GDP-mannose mannosyl hydrolase reaction.
Biochemistry, 45, 2006
2GT2
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Structure of the E. coli GDP-mannose mannosyl hydrolase
Descriptor: GDP-mannose mannosyl hydrolase
Authors:Gabelli, S.B, Bianchet, M.A, Azurmendi, H.F, MIldvan, A.S, Amzel, L.M.
Deposit date:2006-04-27
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray, NMR, and mutational studies of the catalytic cycle of the GDP-mannose mannosyl hydrolase reaction.
Biochemistry, 45, 2006
2GB5
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BU of 2gb5 by Molmil
Crystal structure of NADH pyrophosphatase (EC 3.6.1.22) (1790429) from Escherichia coli K12 at 2.30 A resolution
Descriptor: NADH pyrophosphatase, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-03-09
Release date:2006-03-28
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of NADH pyrophosphatase (EC 3.6.1.22) (1790429) from Escherichia coli K12 at 2.30 A resolution
To be published
2G74
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Y104F mutant of type 1 isopentenylpyrophosphate-dimethylallylpyrophosphate isomerase
Descriptor: Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, MANGANESE (II) ION
Authors:de Ruyck, J, Wouters, J.
Deposit date:2006-02-27
Release date:2006-04-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography.
J.Biol.Chem., 281, 2006
2G73
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Y104F mutant type 1 IPP isomerase complex with EIPP
Descriptor: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, ...
Authors:de Ruyck, J, Wouters, J.
Deposit date:2006-02-27
Release date:2006-04-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography.
J.Biol.Chem., 281, 2006
2FVV
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Human Diphosphoinositol polyphosphate phosphohydrolase 1
Descriptor: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Hallberg, B.M, Kursula, P, Ogg, D, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Flodin, S, Graslund, S, Hammarstrom, M, Hogbom, M, Holmberg-Schiavone, L, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, van den Berg, S, Weigelt, J, Persson, C, Structural Genomics Consortium (SGC)
Deposit date:2006-01-31
Release date:2006-03-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of human diphosphoinositol phosphatase 1
Proteins, 77, 2009
2FML
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Crystal structure of MutT/nudix family protein from Enterococcus faecalis
Descriptor: GLYCEROL, MutT/nudix family protein
Authors:Chang, C, Quartey, P, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-01-09
Release date:2006-02-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of MutT/nudix family protein from Enterococcus faecalis
To be Published
2FKB
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Crystal structure of a putative enzyme (possible Nudix hydrolase) from Escherichia Coli K12
Descriptor: ACETATE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Nocek, B, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-01-04
Release date:2006-02-21
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative enzyme (possible Nudix hydrolase) from Escherichia Coli K12
To be Published
2DUK
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Crystal structure of MS0616
Descriptor: MS0616
Authors:Hosaka, T, Nishino, A, Uchikubo, K.-T, Kishishita, S, Murayama, K, Shirouzu, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-24
Release date:2007-01-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structure of MS0616
To be Published
2DSD
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Crystal structure of human ADP-ribose pyrophosphatase NUDT5 in complex with magnesium and AMP
Descriptor: ADENOSINE MONOPHOSPHATE, ADP-sugar pyrophosphatase, MAGNESIUM ION
Authors:Zha, M, Zhong, C, Ding, J.
Deposit date:2006-06-28
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Human NUDT5 Reveal Insights into the Structural Basis of the Substrate Specificity
J.Mol.Biol., 364, 2006

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