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PDB: 31 results

1QCS
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BU of 1qcs by Molmil
N-TERMINAL DOMAIN OF N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF)
Descriptor: N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF-N), SULFATE ION
Authors:Yu, R.C, Jahn, R, Brunger, A.T.
Deposit date:1999-05-14
Release date:1999-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:NSF N-terminal domain crystal structure: models of NSF function.
Mol.Cell, 4, 1999
1NSF
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BU of 1nsf by Molmil
D2 HEXAMERIZATION DOMAIN OF N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, N-ETHYLMALEIMIDE SENSITIVE FACTOR
Authors:Yu, R.C, Hanson, P.I, Jahn, R, Brunger, A.T.
Deposit date:1998-06-26
Release date:1998-11-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the ATP-dependent oligomerization domain of N-ethylmaleimide sensitive factor complexed with ATP.
Nat.Struct.Biol., 5, 1998
8TS6
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BU of 8ts6 by Molmil
Cyanophage A-1(L) portal
Descriptor: Portal protein
Authors:Yu, R.C, Li, Q, Zhou, C.Z.
Deposit date:2023-08-11
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
8ERH
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BU of 8erh by Molmil
HTLV-1 capsid protein C-terminal domain
Descriptor: PHOSPHATE ION, capsid protein p24
Authors:Yu, R.J, Li, N, Jacques, D.A.
Deposit date:2022-10-11
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:HTLV-1 capsid protein C-terminal domain
To Be Published
8KEA
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BU of 8kea by Molmil
Cyanophage A-1(L) baseplate-initiators
Descriptor: baseplate gp16, central spike, hub, ...
Authors:Yu, R.C, Li, Q, Zhou, C.Z.
Deposit date:2023-08-11
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
8KEC
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BU of 8kec by Molmil
Cyanophage A-1(L) tail fiber
Descriptor: Long tail fiber, short tail fiber
Authors:Yu, R.C, Li, Q, Zhou, C.Z.
Deposit date:2023-08-11
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
2N07
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BU of 2n07 by Molmil
Design of a Highly Stable Disulfide-Deleted Mutant of Analgesic Cyclic alpha-Conotoxin Vc1.1
Descriptor: Alpha-conotoxin Vc1A
Authors:Yu, R, Seymour, V, Berecki, G, Jia, X, Akcan, M, Adams, D, Kaas, Q, Craik, D.
Deposit date:2015-03-04
Release date:2016-04-13
Method:SOLUTION NMR
Cite:Design of a Highly Stable Disulfide-Deleted Mutant of Analgesic Cyclic alpha-Conotoxin Vc1.1.
To be Published
8KEE
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BU of 8kee by Molmil
Cyanophage A-1(L) sheath-tube
Descriptor: sheath, tube
Authors:Yu, R.C, Li, Q, Zhou, C.Z.
Deposit date:2023-08-11
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
8KEG
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BU of 8keg by Molmil
Cyanophage A-1(L) neck/gp5-neck fiber
Descriptor: Neck gp5, neck fiber gp82N
Authors:Yu, R.C, Li, Q, Zhou, C.Z.
Deposit date:2023-08-11
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
8ERE
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BU of 8ere by Molmil
HTLV-1 capsid protein N-terminal domain triclinic crystal form
Descriptor: capsid protein p24
Authors:Yu, R.J, Li, N, Jacques, D.A.
Deposit date:2022-10-11
Release date:2023-10-18
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:HTLV-1 capsid protein N-terminal domain triclinic crystal form
To Be Published
8ERF
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BU of 8erf by Molmil
HTLV-1 capsid protein N-terminal domain orthorhombic crystal form
Descriptor: SULFATE ION, capsid protein p24
Authors:Yu, R.J, Li, N, Jacques, D.A.
Deposit date:2022-10-11
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:HTLV-1 capsid protein N-terminal domain orthorhombic crystal form
To Be Published
8ERG
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BU of 8erg by Molmil
HTLV-1 capsid protein N-terminal domain hexagonal crystal form
Descriptor: SULFATE ION, capsid protein p24
Authors:Yu, R.J, Li, N, Jacques, D.A.
Deposit date:2022-10-11
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:HTLV-1 capsid protein N-terminal domain hexagonal crystal form
To Be Published
8ERI
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BU of 8eri by Molmil
HTLV-1 capsid protein full-length
Descriptor: capsid protein p24
Authors:Yu, R.J, Li, N, Jacques, D.A.
Deposit date:2022-10-11
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:HTLV-1 capsid protein full-length
To Be Published
8KE9
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BU of 8ke9 by Molmil
The CBD domain of cyanophage A-1(L) short tail fiber
Descriptor: Tail fiber protein
Authors:Yu, R.C, Li, Q, Zhou, C.Z.
Deposit date:2023-08-11
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
8KEF
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BU of 8kef by Molmil
Cyanophage A-1(L) neck/gp7-terminator
Descriptor: Neck gp7, Terminator gp8
Authors:Yu, R.C, Li, Q, Zhou, C.Z.
Deposit date:2023-08-11
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
1NNF
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BU of 1nnf by Molmil
Crystal Structure Analysis of Haemophlius Influenzae Ferric-ion Binding Protein H9Q Mutant Form
Descriptor: FE (III) ION, Iron-utilization periplasmic protein, {[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID
Authors:Shouldice, S.R, Dougan, D.R, Skene, R.J, Tari, L.W, McRee, D.E, Yu, R.-H, Schryvers, A.B.
Deposit date:2003-01-13
Release date:2003-04-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High Resolution Structure of an Alternate Form of the Ferric ion Binding Protein from Haemophilus influenzae
J.Biol.Chem., 278, 2003
1Y0S
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BU of 1y0s by Molmil
Crystal structure of PPAR delta complexed with GW2331
Descriptor: (2S)-2-(4-[2-(3-[2,4-DIFLUOROPHENYL]-1-HEPTYLUREIDO)ETHYL]PHENOXY)-2-METHYLBUTYRIC ACID, IODIDE ION, Peroxisome proliferator activated receptor delta, ...
Authors:Takada, I, Yu, R.T, Xu, H.E, Xu, R.X, Lambert, M.H, Montana, V.G, Kliewer, S.A, Evans, R.M, Umesono, K.
Deposit date:2004-11-16
Release date:2005-03-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Alteration of a Single Amino Acid in Peroxisome Proliferator-Activated Receptor-alpha (PPARalpha) Generates a PPAR delta Phenotype
MOL.ENDOCRINOL., 14, 2000
3ODB
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BU of 3odb by Molmil
Haemophilus influenzae ferric binding protein A -Iron Loaded -open Conformation
Descriptor: FE (III) ION, Iron-utilization periplasmic protein
Authors:Khambati, H.K, Moraes, T.F, Singh, J, Shouldice, S.R, Yu, R.H, Schryvers, A.B.
Deposit date:2010-08-11
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The role of vicinal tyrosine residues in the function of Haemophilus influenzae ferric binding protein A.
Biochem.J., 2010
3HOL
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BU of 3hol by Molmil
The Structure of Intact Ap-TbpB (N and C lobes)
Descriptor: TbpB
Authors:Moraes, T.F, Yu, R.H, Schryvers, A.B, Strynadka, N.C.J.
Deposit date:2009-06-02
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Insights into the bacterial transferrin receptor: the structure of transferrin-binding protein B from Actinobacillus pleuropneumoniae.
Mol.Cell, 35, 2009
6MGR
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BU of 6mgr by Molmil
Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Campylobacter jejuni in the complex with inhibitor Oxanosine monophosphate
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-[(Z)-(aminomethylidene)amino]-1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazole-4-carboxylic acid, CHLORIDE ION, ...
Authors:Kim, Y, Maltseva, N, Yu, R, Hedstrom, L, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-14
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Campylobacter jejuni in the complex with inhibitor Oxanosine Monophosphate
To Be Published
3OD7
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BU of 3od7 by Molmil
Haemophilus influenzae ferric binding protein A -Iron Loaded
Descriptor: FE (III) ION, Iron-utilization periplasmic protein, PHOSPHATE ION
Authors:Khambati, H.K, Moraes, T.F, Singh, J, Shouldice, S.R, Yu, R.H, Schryvers, A.B.
Deposit date:2010-08-11
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The role of vicinal tyrosine residues in the function of Haemophilus influenzae ferric binding protein A.
Biochem.J., 2010
6MGU
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BU of 6mgu by Molmil
Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus Anthracis in the complex with inhibitor Oxanosine monophosphate
Descriptor: 1,2-ETHANEDIOL, 5-[(Z)-(aminomethylidene)amino]-1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazole-4-carboxylic acid, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, Y, Maltseva, N, Yu, R, Hedstrom, L, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-14
Release date:2018-10-24
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus Anthracis in the complex with inhibitor Oxanosine monophosphate
To Be Published
5Z38
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BU of 5z38 by Molmil
Crystal structure of CsrA bound to CesT
Descriptor: CesT protein, Truncated-CsrA, wild type CsrA
Authors:Ye, F, Yang, F, Yu, R, Lin, X, Qi, J, Chen, Z, Gao, G.F, Lu, G.
Deposit date:2018-01-05
Release date:2018-04-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.292 Å)
Cite:Molecular basis of binding between the global post-transcriptional regulator CsrA and the T3SS chaperone CesT
Nat Commun, 9, 2018
4O4X
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BU of 4o4x by Molmil
Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) double mutant Tyr-167-Ala and Trp-176-Ala from Haemophilus parasuis Hp5
Descriptor: GLYCEROL, SODIUM ION, SULFATE ION, ...
Authors:Calmettes, C, Yu, R.H, Schryvers, A.B, Moraes, T.F.
Deposit date:2013-12-19
Release date:2015-01-14
Last modified:2015-03-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Nonbinding site-directed mutants of transferrin binding protein B exhibit enhanced immunogenicity and protective capabilities.
Infect.Immun., 83, 2015
3HOE
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BU of 3hoe by Molmil
Crystal Structure of Surface Lipoprotein
Descriptor: TbpB
Authors:Moraes, T.F, Yu, R.H, Schryvers, A.B, Strynadka, N.C.J.
Deposit date:2009-06-02
Release date:2009-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Insights into the bacterial transferrin receptor: the structure of transferrin-binding protein B from Actinobacillus pleuropneumoniae.
Mol.Cell, 35, 2009

 

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