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PDB: 59 results

8WQM
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BU of 8wqm by Molmil
Complex structure of AtHPPD with Atovaquone
Descriptor: 2-[trans-4-(4-chlorophenyl)cyclohexyl]-3-hydroxynaphthalene-1,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-10-11
Release date:2024-03-13
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Complex structure of AtHPPD with Atovaquone
To Be Published
8GWD
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BU of 8gwd by Molmil
Crystal structure of AtHPPD-Y18734 complex
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-[(1S)-1-phenylethyl]quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-09-16
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.889 Å)
Cite:Crystal structure of AtHPPD-Y18734 complex
To Be Published
8H6B
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BU of 8h6b by Molmil
Crystal structure of AtHPPD complexed with YH20702
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, N-(1-methyl-1,2,3,4-tetrazol-5-yl)-1-pentyl-pyrrolo[2,3-b]pyridine-4-carboxamide
Authors:Yang, G.-F.
Deposit date:2022-10-16
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.897 Å)
Cite:Crystal structure of AtHPPD complexed with YH20702
To Be Published
8H6A
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BU of 8h6a by Molmil
Crystal structure of AtHPPD complexed with YH21477
Descriptor: 1-[(2-chlorophenyl)methyl]-3-methyl-N-(1-methyl-1,2,3,4-tetrazol-5-yl)-2-oxidanylidene-benzimidazole-4-carboxamide, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F.
Deposit date:2022-10-16
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Crystal structure of AtHPPD complexed with YH20702
To Be Published
7VO8
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BU of 7vo8 by Molmil
Structure of AtHPPD complexed with LSY-1
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, N-[6-[[9-(dimethylamino)-12H-benzo[a]phenoxazin-5-yl]amino]hexyl]-4-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-[oxidanyl(oxidanylidene)-$l^4-azanyl]benzamide
Authors:Yang, G.-F, Dong, J.
Deposit date:2021-10-12
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In vivo diagnostics of abiotic plant stress responses via in situ real-time fluorescence imaging
Plant Physiol., 190, 2022
8HOW
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BU of 8how by Molmil
Crystal structure of AtHPPD-Y191052 complex
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(2-phenylethyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-12-11
Release date:2023-01-25
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
7WJK
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BU of 7wjk by Molmil
Complex structure of AtHPPD-ZWJ
Descriptor: 3-[2-[4-[[4-[2,2-bis(fluoranyl)-4,6,10,12-tetramethyl-1,3-diaza-2$l^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-4,6,9,11-tetraen-8-yl]phenoxy]methyl]-1,2,3-triazol-1-yl]ethyl]-1,5-dimethyl-6-[(1S)-2-oxidanyl-6-oxidanylidene-cyclohex-2-en-1-yl]carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-01-06
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.704 Å)
Cite:Complex structure of AtHPPD-PyQ1
To Be Published
7WJ8
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Complex structure of AtHPPD-PyQ1
Descriptor: 2-pyren-1-yloxyethyl 2-[1,5-dimethyl-2,4-bis(oxidanylidene)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazolin-3-yl]ethanoate, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-01-05
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Design of an HPPD fluorescent probe and visualization of plant responses to abiotic stress
Adv Agrochem, 2022
7WJJ
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Complex structure of AtHPPD-PyQ2
Descriptor: 2-[1,5-dimethyl-2,4-bis(oxidanylidene)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazolin-3-yl]-N-(2-pyren-1-yloxyethyl)ethanamide, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-01-06
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Design of an HPPD fluorescent probe and visualization of plant responses to abiotic stress
Adv Agrochem, 2022
3TGU
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BU of 3tgu by Molmil
Cytochrome bc1 complex from chicken with pfvs-designed moa inhibitor bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ...
Authors:Huang, L.-S, Yang, G.-F, Berry, E.A.
Deposit date:2011-08-17
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Computational discovery of picomolar Q(o) site inhibitors of cytochrome bc1 complex.
J.Am.Chem.Soc., 134, 2012
8GQT
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BU of 8gqt by Molmil
Structure of Mpro complexed with Quercetin
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, 3C-like proteinase nsp5
Authors:Dong, J, Yang, G.-F.
Deposit date:2022-08-30
Release date:2023-08-30
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structure of Mpro complexed with Quercetin
To Be Published
6M6D
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BU of 6m6d by Molmil
Structure of HPPD complexed with a synthesized inhibitor
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(3-trimethylsilylprop-2-ynyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Yang, W.-C, Yang, G.-F.
Deposit date:2020-03-14
Release date:2021-03-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:Structure-Guided Discovery of Silicon-Containing Subnanomolar Inhibitor of Hydroxyphenylpyruvate Dioxygenase as a Potential Herbicide.
J.Agric.Food Chem., 69, 2021
8HZA
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BU of 8hza by Molmil
Crystal structure of AtHPPD-YH20326 complex
Descriptor: 1,4-dimethyl-3-(oxan-4-ylmethyl)-5-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-benzimidazol-2-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-08
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of AtHPPD-YH20326 complex
To Be Published
8I0Y
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BU of 8i0y by Molmil
Crystal structure of AtHPPD-Y191713 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, ethyl 5-methyl-6-[(2-methyl-3-oxidanylidene-1H-pyrazol-4-yl)carbonyl]-4-oxidanylidene-3-phenyl-quinazoline-2-carboxylate
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-11
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Crystal structure of AtHPPD-Y191713 complex
To Be Published
8I2S
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BU of 8i2s by Molmil
Crystal structure of AtHPPD-Y18979 complex
Descriptor: 1,5-dimethyl-3-(naphthalen-2-ylmethyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-15
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.592 Å)
Cite:Crystal structure of AtHPPD-Y18979 complex
To Be Published
8HXG
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Crystal structure of AtHPPD-Y14116 complex
Descriptor: (1S,2R,3R)-2-[(S)-(2-methoxy-8-methyl-quinolin-3-yl)-oxidanyl-methyl]-6,6-dimethyl-cyclohex-4-ene-1,3-diol, (4S)-2-METHYL-2,4-PENTANEDIOL, 4-hydroxyphenylpyruvate dioxygenase, ...
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-04
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Crystal structure of AtHPPD-Y14116 complex
To Be Published
8HZ7
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BU of 8hz7 by Molmil
Crystal structure of AtHPPD-Y181135 complex
Descriptor: 3-butyl-5-methyl-6-[(2-methyl-3-oxidanylidene-1H-pyrazol-4-yl)carbonyl]-1,2,3-benzotriazin-4-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-08
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Crystal structure of AtHPPD-Y181135 complex
To Be Published
8HYO
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BU of 8hyo by Molmil
Crystal structure of AtHPPD-Y18031 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 6-[(R)-[(2R,6R)-2,6-bis(oxidanyl)cyclohexyl]-oxidanyl-methyl]-3-(furan-2-ylmethyl)-1,5-dimethyl-quinazoline-2,4-dione, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-07
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of AtHPPD-Y18031 complex
To Be Published
8HXF
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BU of 8hxf by Molmil
Crystal structure of AtHPPD-Y181188 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-4-[[4-(trifluoromethyl)phenyl]methyl]-1,4-benzothiazin-3-one, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-04
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:Crystal structure of AtHPPD-Y181188 complex
To Be Published
8HXH
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BU of 8hxh by Molmil
Crystal structure of AtHPPD-Y18024 complex
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-propyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-04
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:Crystal structure of AtHPPD-Y18024 complex
To Be Published
8HYS
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Crystal structure of AtHPPD-Y19802 complex
Descriptor: 1-methyl-3-[2-methyl-6-methylsulfonyl-3-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-phenyl]-6-(trifluoromethyl)pyrimidine-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-07
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of AtHPPD-Y19802 complex
To Be Published
8HYM
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BU of 8hym by Molmil
Crystal structure of AtHPPD-Y18030 complex
Descriptor: 3-cyclopentyl-1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-07
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.794 Å)
Cite:Crystal structure of AtHPPD-Y18030 complex
To Be Published
8I0G
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BU of 8i0g by Molmil
Crystal structure of AtHPPD-Y19543 complex
Descriptor: 3-[(4-fluorophenyl)methyl]-5-methyl-6-[(2-methyl-3-oxidanylidene-1H-pyrazol-4-yl)carbonyl]-1,2,3-benzotriazin-4-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-10
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:Crystal structure of AtHPPD-Y19543 complex
To Be Published
8HWR
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BU of 8hwr by Molmil
Crystal structure of AtHPPD-Y191193 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 6-chloranyl-3-cyclopentyl-1-methyl-7-(2-oxidanyl-6-oxidanylidene-cyclohexa-1,3-dien-1-yl)carbonyl-quinazoline-2,4-dione, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-02
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystal structure of AtHPPD-Y191193 complex
To Be Published
8I2U
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BU of 8i2u by Molmil
Crystal structure of AtHPPD-YH20282 complex
Descriptor: 2-[2-chloranyl-4-methylsulfonyl-3-(2-trimethylsilylethoxy)phenyl]carbonyl-3-oxidanyl-cyclohex-2-en-1-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-15
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.989 Å)
Cite:Crystal structure of AtHPPD-YH20282 complex
To Be Published

 

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