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PDB: 312 results

1WUU
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crystal structure of human galactokinase complexed with MgAMPPNP and galactose
Descriptor: Galactokinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Thoden, J.B, Timson, D.J, Reece, R.J, Holden, H.M.
Deposit date:2004-12-08
Release date:2004-12-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Structure of Human Galactokinase: IMPLICATIONS FOR TYPE II GALACTOSEMIA
J.Biol.Chem., 280, 2005
4RQO
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Crystal structure of L-Serine Dehydratase from Legionella pneumophila
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, L-serine dehydratase
Authors:Thoden, J.B, Holden, H.M, Grant, G.A.
Deposit date:2014-11-04
Release date:2014-11-19
Last modified:2014-12-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of l-Serine Dehydratase from Legionella pneumophila: Novel Use of the C-Terminal Cysteine as an Intrinsic Competitive Inhibitor.
Biochemistry, 53, 2014
4XD1
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X-ray structure of the N-formyltransferase QdtF from Providencia alcalifaciens, W305A mutant, in the presence of TDP-Qui3N and N5-THF
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid, ...
Authors:Thoden, J.B, Woodford, C.R, Holden, H.M.
Deposit date:2014-12-18
Release date:2015-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:New Role for the Ankyrin Repeat Revealed by a Study of the N-Formyltransferase from Providencia alcalifaciens.
Biochemistry, 54, 2015
4XD0
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X-ray structure of the N-formyltransferase QdtF from Providencia alcalifaciens
Descriptor: (3R,4S,5R,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate, CHLORIDE ION, N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid, ...
Authors:Thoden, J.B, Woodford, C.R, Holden, H.M.
Deposit date:2014-12-18
Release date:2015-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:New Role for the Ankyrin Repeat Revealed by a Study of the N-Formyltransferase from Providencia alcalifaciens.
Biochemistry, 54, 2015
4XCZ
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X-ray structure of the N-formyltransferase QdtF from Providencia alcalifaciens in complex with TDP-Qui3n and N5-THF
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid, ...
Authors:Thoden, J.B, Woodford, C.R, Holden, H.M.
Deposit date:2014-12-18
Release date:2015-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:New Role for the Ankyrin Repeat Revealed by a Study of the N-Formyltransferase from Providencia alcalifaciens.
Biochemistry, 54, 2015
2UDP
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BU of 2udp by Molmil
UDP-GALACTOSE 4-EPIMERASE COMPLEXED WITH UDP-PHENOL
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHENYL-URIDINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Gulick, A.M, Holden, H.M.
Deposit date:1997-03-08
Release date:1998-03-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-resolution X-ray structure of UDP-galactose 4-epimerase complexed with UDP-phenol.
Protein Sci., 5, 1996
5TIF
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x-ray structure of acyl-CoA thioesterase I, TesA, triple mutant M141L/Y145K/L146K in complex with octanoic acid
Descriptor: Acyl-CoA thioesterase I, DI(HYDROXYETHYL)ETHER, OCTANOIC ACID (CAPRYLIC ACID)
Authors:Thoden, J.B, Holden, H.M, Grisewood, M.J, Hernandez Lozada, N.J, Gifford, N.P, Mendez-Perez, D, Schoenberger, H.A, Allan, M.F, Pfleger, B.F, Marines, C.D.
Deposit date:2016-10-02
Release date:2017-04-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Computational Redesign of Acyl-ACP Thioesterase with Improved Selectivity toward Medium-Chain-Length Fatty Acids.
ACS Catal, 7, 2017
5J63
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Crystal Structure of the N-terminal N-formyltransferase Domain (residues 1-306) of Escherichia coli Arna in Complex with UDP-Ara4N and Folinic Acid
Descriptor: (2R,3R,4S,5S)-5-amino-3,4-dihydroxytetrahydro-2H-pyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate, (4aS,6S)-2-amino-6-{(E)-[(4-methylphenyl)imino]methyl}-4-oxo-4,6,7,8-tetrahydropteridine-5(4aH)-carbaldehyde, Bifunctional polymyxin resistance protein ArnA
Authors:Thoden, J.B, Genthe, N.A, Holden, H.M.
Deposit date:2016-04-04
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Escherichia coli ArnA N-formyltransferase domain in complex with N(5) -formyltetrahydrofolate and UDP-Ara4N.
Protein Sci., 25, 2016
8V4H
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X-ray structure of the NADP-dependent reductase from Campylobacter jejuni responsible for the synthesis of CDP-glucitol in the presence of CDP-glucitol
Descriptor: CHLORIDE ION, PHOSPHATE ION, Putative nucleotide sugar dehydratase, ...
Authors:Thoden, J.B, Schumann, M.E, Holden, H.M, Raushel, F.M.
Deposit date:2023-11-29
Release date:2023-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biosynthesis of Cytidine Diphosphate-6-d-Glucitol for the Capsular Polysaccharides of Campylobacter jejuni.
Biochemistry, 63, 2024
5BSZ
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BU of 5bsz by Molmil
X-ray structure of the sugar N-methyltransferase KedS8 from Streptoalloteichus sp ATCC 53650
Descriptor: 1,2-ETHANEDIOL, N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Thoden, J.B, Delvaux, N.A, Holden, H.M.
Deposit date:2015-06-02
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular architecture of KedS8, a sugar N-methyltransferase from Streptoalloteichus sp. ATCC 53650.
Protein Sci., 24, 2015
1SJC
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x-ray structure of o-succinylbenzoate synthase complexed with N-succinyl methionine
Descriptor: MAGNESIUM ION, N-SUCCINYL METHIONINE, N-acylamino acid racemase
Authors:Thoden, J.B, Taylor-Ringia, E.A, Garrett, J.B, Gerlt, J.A, Holden, H.M, Rayment, I.
Deposit date:2004-03-03
Release date:2004-06-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Evolution of Enzymatic Activity in the Enolase Superfamily: Structural Studies of the Promiscuous o-Succinylbenzoate Synthase from Amycolatopsis
Biochemistry, 43, 2004
1SJA
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X-ray structure of o-Succinylbenzoate Synthase complexed with N-acetylmethionine
Descriptor: MAGNESIUM ION, N-ACETYLMETHIONINE, N-acylamino acid racemase
Authors:Thoden, J.B, Taylor-Ringia, E.A, Garrett, J.B, Gerlt, J.A, Holden, H.M, Rayment, I.
Deposit date:2004-03-03
Release date:2004-06-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evolution of Enzymatic Activity in the Enolase Superfamily: Structural Studies of the Promiscuous o-Succinylbenzoate Synthase from Amycolatopsis
Biochemistry, 43, 2004
1SJD
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x-ray structure of o-succinylbenzoate synthase complexed with n-succinyl phenylglycine
Descriptor: N-SUCCINYL PHENYLGLYCINE, N-acylamino acid racemase
Authors:Thoden, J.B, Taylor-Ringia, E.A, Garrett, J.B, Gerlt, J.A, Holden, H.M, Rayment, I.
Deposit date:2004-03-03
Release date:2004-06-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Evolution of Enzymatic Activity in the Enolase Superfamily: Structural Studies of the Promiscuous o-Succinylbenzoate Synthase from Amycolatopsis
Biochemistry, 43, 2004
1SJB
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X-ray structure of o-succinylbenzoate synthase complexed with o-succinylbenzoic acid
Descriptor: 2-SUCCINYLBENZOATE, MAGNESIUM ION, N-acylamino acid racemase
Authors:Thoden, J.B, Taylor-Ringia, E.A, Garrett, J.B, Gerlt, J.A, Holden, H.M, Rayment, I.
Deposit date:2004-03-03
Release date:2004-06-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Evolution of Enzymatic Activity in the Enolase Superfamily: Structural Studies of the Promiscuous o-Succinylbenzoate Synthase from Amycolatopsis
Biochemistry, 43, 2004
1MMX
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BU of 1mmx by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-fucose
Descriptor: Aldose 1-epimerase, SODIUM ION, alpha-L-fucopyranose
Authors:Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
1MMZ
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Crystal structure of galactose mutarotase from Lactococcus lactis complexed with L-arabinose
Descriptor: Aldose 1-epimerase, SODIUM ION, beta-L-arabinopyranose
Authors:Thoden, J.B, Kim, J, Raushel, R.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
3K5H
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Crystal structure of carboxyaminoimidazole ribonucleotide synthase from asperigillus clavatus complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Phosphoribosyl-aminoimidazole carboxylase
Authors:Thoden, J.B, Holden, H.M, Paritala, H, Firestine, S.M.
Deposit date:2009-10-07
Release date:2009-10-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional studies of Aspergillus clavatus N(5)-carboxyaminoimidazole ribonucleotide synthetase
Biochemistry, 49, 2010
3K5I
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Crystal structure of N5-carboxyaminoimidazole synthase from aspergillus clavatus in complex with ADP and 5-aminoimadazole ribonucleotide
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Holden, H.M, Paritala, H, Firestine, S.M.
Deposit date:2009-10-07
Release date:2009-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional studies of Aspergillus clavatus N(5)-carboxyaminoimidazole ribonucleotide synthetase
Biochemistry, 49, 2010
7US5
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BU of 7us5 by Molmil
X-ray crystal structure of GDP-D-glycero-D-manno-heptose 4,6-Dehydratase from Campylobacter jejuni
Descriptor: 1,2-ETHANEDIOL, GDP-D-GLYCERO-D-MANNO-HEPTOSE 4,6-DEHYDRATASE, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-04-23
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Reaction Mechanism and Three-Dimensional Structure of GDP-d-glycero-alpha-d-manno-heptose 4,6-Dehydratase from Campylobacter jejuni.
Biochemistry, 61, 2022
1Z45
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Crystal structure of the gal10 fusion protein galactose mutarotase/UDP-galactose 4-epimerase from Saccharomyces cerevisiae complexed with NAD, UDP-glucose, and galactose
Descriptor: GAL10 bifunctional protein, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Thoden, J.B, Holden, H.M.
Deposit date:2005-03-15
Release date:2005-04-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The molecular architecture of galactose mutarotase/UDP-galactose 4-epimerase from Saccharomyces cerevisiae.
J.Biol.Chem., 280, 2005
2A2C
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BU of 2a2c by Molmil
x-ray structure of human N-acetyl galactosamine kinase complexed with Mg-ADP and N-acetyl galactosamine 1-phosphate
Descriptor: 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-galactopyranose, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Thoden, J.B, Holden, H.M.
Deposit date:2005-06-22
Release date:2005-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The molecular architecture of human N-acetylgalactosamine kinase.
J.Biol.Chem., 280, 2005
2A2D
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BU of 2a2d by Molmil
X-ray structure of human n-acetyl galactosamine kinase complexed with Mn-AMPPNP and n-acetyl glactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, MANGANESE (II) ION, N-acetylgalactosamine kinase, ...
Authors:Thoden, J.B, Holden, H.M.
Deposit date:2005-06-22
Release date:2005-07-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The molecular architecture of human N-acetylgalactosamine kinase.
J.Biol.Chem., 280, 2005
4EA8
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X-ray crystal structure of PerB from Caulobacter crescentus in complex with coenzyme A and GDP-N-acetylperosamine at 1 Angstrom resolution
Descriptor: CHLORIDE ION, COENZYME A, GDP-N-acetylperosamine, ...
Authors:Thoden, J.B, Reinhardt, L.A, Cook, P.D, Menden, P, Cleland, W.W, Holden, H.M.
Deposit date:2012-03-22
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Catalytic Mechanism of Perosamine N-Acetyltransferase Revealed by High-Resolution X-ray Crystallographic Studies and Kinetic Analyses.
Biochemistry, 51, 2012
4EAA
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BU of 4eaa by Molmil
X-ray crystal structure of the H141N mutant of perosamine N-acetyltransferase from Caulobacter crescentus in complex with CoA and GDP-perosamine
Descriptor: CHLORIDE ION, COENZYME A, GDP-perosamine, ...
Authors:Thoden, J.B, Reinhardt, L.A, Cook, P.D, Menden, P, Cleland, W.W, Holden, H.M.
Deposit date:2012-03-22
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Catalytic Mechanism of Perosamine N-Acetyltransferase Revealed by High-Resolution X-ray Crystallographic Studies and Kinetic Analyses.
Biochemistry, 51, 2012
4EAB
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X-ray crystal structure of the H141A mutant of GDP-perosamine N-acetyl transferase from Caulobacter crescentus in complex with CoA and GDP-perosamine
Descriptor: CHLORIDE ION, COENZYME A, GDP-perosamine, ...
Authors:Thoden, J.B, Reinhardt, L.A, Cook, P.D, Menden, P, Cleland, W.W, Holden, H.M.
Deposit date:2012-03-22
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Catalytic Mechanism of Perosamine N-Acetyltransferase Revealed by High-Resolution X-ray Crystallographic Studies and Kinetic Analyses.
Biochemistry, 51, 2012

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