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PDB: 82 results

2ZV2
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Crystal structure of human calcium/calmodulin-dependent protein kinase kinase 2, beta, CaMKK2 kinase domain in complex with STO-609
Descriptor: 7-oxo-7H-benzimidazo[2,1-a]benz[de]isoquinoline-3-carboxylic acid, Calcium/calmodulin-dependent protein kinase kinase 2
Authors:Yoshikawa, S, Kukimoto-niino, M, Shirouzu, M, Suzuki, A, Lee, S, Minokoshi, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-10-31
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the Ca2+/calmodulin-dependent protein kinase kinase in complex with the inhibitor STO-609
J.Biol.Chem., 286, 2011
2EB9
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Crystal Structure of Cu(II)(Sal-Leu)/apo-Myoglobin
Descriptor: (N-SALICYLIDEN-L-LEUCINATO)-COPPER(II), GLYCEROL, Myoglobin, ...
Authors:Abe, S, Okazaki, S, Ueno, T, Hikage, T, Suzuki, A, Yamane, T, Watanabe, Y.
Deposit date:2007-02-07
Release date:2007-07-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design and Structure Analysis of Artificial Metalloproteins: Selective Coordination of His64 to Copper Complexes with Square-Planar Structure in the apo-Myoglobin Scaffold
Inorg.Chem., 46, 2007
2EB8
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Crystal Structure of Cu(II)(Sal-Phe)/apo-Myoglobin
Descriptor: (N-SALICYLIDEN-L-PHENYLALANATO)-COPPER(II), Myoglobin, PHOSPHATE ION
Authors:Abe, S, Okazaki, S, Ueno, T, Hikage, T, Suzuki, A, Yamane, T, Watanabe, Y.
Deposit date:2007-02-07
Release date:2007-07-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Design and Structure Analysis of Artificial Metalloproteins: Selective Coordination of His64 to Copper Complexes with Square-Planar Structure in the apo-Myoglobin Scaffold
Inorg.Chem., 46, 2007
2EF2
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Crystal Structure of an Artificial Metalloprotein:Rh(Phebox-Ph)/apo-A71G Myoglobin
Descriptor: Myoglobin, PHOSPHATE ION, [2,6-BIS(4-PHENYL)-1,3-OXAZOLIN-2-YL]RHODIUM(III)
Authors:Abe, S, Satake, Y, Okazaki, S, Ueno, T, Hikage, T, Suzuki, A, Yamane, T, Nakajima, H, Watanabe, Y.
Deposit date:2007-02-20
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Incorporation of a Phebox Rhodium Complex into apo-Myoglobin Affords a Stable Organometallic Protein Showing Unprecedented Arrangement of the Complex in the Cavity
ORGANOMETALLICS, 26, 2007
2ZQ3
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The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.6 angstroms resolution
Descriptor: Lysozyme C, SODIUM ION
Authors:Aibara, S, Suzuki, A, Kidera, A, Shibata, K, Hirose, M.
Deposit date:2008-08-03
Release date:2008-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.5 angstroms resolution
To be Published
2Z5E
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BU of 2z5e by Molmil
Crystal Structure of Proteasome Assembling Chaperone 3
Descriptor: Proteasome Assembling Chaperone 3
Authors:Okamoto, K, Kurimoto, E, Sakata, E, Suzuki, A, Yamane, T, Hirano, Y, Murata, S, Tanaka, K, Kato, K.
Deposit date:2007-07-06
Release date:2008-02-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes
Nat.Struct.Mol.Biol., 15, 2008
2Z5B
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Crystal Structure of a Novel Chaperone Complex for Yeast 20S Proteasome Assembly
Descriptor: Protein YPL144W, Uncharacterized protein YLR021W
Authors:Yashiroda, H, Mizushima, T, Okamoto, K, Kameyama, T, Hayashi, H, Kishimoto, T, Kasahara, M, Kurimoto, E, Sakata, E, Suzuki, A, Hirano, Y, Murata, S, Kato, K, Yamane, T, Tanaka, K.
Deposit date:2007-07-03
Release date:2008-01-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes
Nat.Struct.Mol.Biol., 15, 2008
2ZKI
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Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872)
Descriptor: 199aa long hypothetical Trp repressor binding protein, SULFATE ION
Authors:Kawano, T, Teshima, N, Suzuki, A, Kuramitsu, S, Yamane, T.
Deposit date:2008-03-21
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872)
To be Published
2EFX
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The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with L-phenylalanine amide
Descriptor: BARIUM ION, D-amino acid amidase, PHENYLALANINE AMIDE
Authors:Okazaki, S, Suzuki, A, Mizushima, T, Komeda, H, Asano, Y, Yamane, T.
Deposit date:2007-02-26
Release date:2007-03-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of D-amino-acid amidase complexed with L-phenylalanine and with L-phenylalanine amide: insight into the D-stereospecificity of D-amino-acid amidase from Ochrobactrum anthropi SV3.
Acta Crystallogr.,Sect.D, 64, 2008
2EFU
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The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with L-phenylalanine
Descriptor: BARIUM ION, D-Amino acid amidase, PHENYLALANINE
Authors:Okazaki, S, Suzuki, A, Mizushima, T, Komeda, H, Asano, Y, Yamane, T.
Deposit date:2007-02-26
Release date:2007-03-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of D-amino-acid amidase complexed with L-phenylalanine and with L-phenylalanine amide: insight into the D-stereospecificity of D-amino-acid amidase from Ochrobactrum anthropi SV3.
Acta Crystallogr.,Sect.D, 64, 2008
3VH6
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Crystal structure of the chicken CENP-T histone fold/CENP-W/CENP-S/CENP-X heterotetrameric complex, crystal form II
Descriptor: CENP-S, CENP-T, CENP-W, ...
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-08-23
Release date:2012-03-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.351 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold
Cell(Cambridge,Mass.), 148, 2012
3VH5
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Crystal structure of the chicken CENP-T histone fold/CENP-W/CENP-S/CENP-X heterotetrameric complex, crystal form I
Descriptor: CENP-S, CENP-T, CENP-W, ...
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-08-23
Release date:2012-03-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold
Cell(Cambridge,Mass.), 148, 2012
2ZQ4
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The crystal structure of the orthorhombic form of hen egg white lysozyme at 2.0 angstroms resolution
Descriptor: Lysozyme C
Authors:Aibara, S, Suzuki, A, Kidera, A, Shibata, K, Yamane, T, Hirose, M.
Deposit date:2008-08-03
Release date:2008-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.5 angstroms resolution
To be Published
2Z6P
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BU of 2z6p by Molmil
Crystal Structure of the Ufc1, Ufm1 conjugating enzyme 1
Descriptor: Ufm1-conjugating enzyme 1
Authors:Mizushima , T, Tatsumi, K, Ozaki, Y, Kawakami, T, Suzuki, A, Ogasahara, K, Komatsu, M, Kominami, E, Tanaka, K, Yamane, T.
Deposit date:2007-08-06
Release date:2007-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Ufc1, the Ufm1-conjugating enzyme
Biochem.Biophys.Res.Commun., 362, 2007
2Z6O
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Crystal Structure of the Ufc1, Ufm1 conjugating enzyme 1
Descriptor: MAGNESIUM ION, Ufm1-conjugating enzyme 1
Authors:Mizushima , T, Tatsumi, K, Ozaki, Y, Kawakami, T, Suzuki, A, Ogasahara, K, Komatsu, M, Kominami, E, Tanaka, K, Yamane, T.
Deposit date:2007-08-06
Release date:2007-09-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Ufc1, the Ufm1-conjugating enzyme
Biochem.Biophys.Res.Commun., 362, 2007
3WSO
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BU of 3wso by Molmil
Crystal structure of the Skp1-FBG3 complex
Descriptor: F-box only protein 44, S-phase kinase-associated protein 1
Authors:Kumanomidou, T, Nishio, K, Takagi, K, Nakagawa, T, Suzuki, A, Yamane, T, Tokunaga, F, Iwai, K, Murakami, A, Yoshida, Y, Tanaka, K, Mizushima, T.
Deposit date:2014-03-18
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structural Differences between a Glycoprotein Specific F-Box Protein Fbs1 and Its Homologous Protein FBG3
Plos One, 10, 2015
2EC2
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Crystal structure of transposase from Sulfolobus tokodaii
Descriptor: 136aa long hypothetical transposase, SULFATE ION
Authors:Kawai, K, Suzuki, A, Kuramitsu, S, Masui, R, Yamane, T.
Deposit date:2007-02-09
Release date:2007-02-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of transposase from Sulfolobus tokodaii
To be Published
2GGS
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BU of 2ggs by Molmil
crystal structure of hypothetical dTDP-4-dehydrorhamnose reductase from sulfolobus tokodaii
Descriptor: 273aa long hypothetical dTDP-4-dehydrorhamnose reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Rajakannan, V, Mizushima, T, Suzuki, A, Masui, R, Kuramitsu, S, Yamane, T.
Deposit date:2006-03-24
Release date:2007-03-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:crystal structure of hypothetical dTDP-4-dehydrorhamnose reductase from sulfolobus tokodaii
To be published
3VOW
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Crystal Structure of the Human APOBEC3C having HIV-1 Vif-binding Interface
Descriptor: CHLORIDE ION, Probable DNA dC->dU-editing enzyme APOBEC-3C, ZINC ION
Authors:Kitamura, S, Suzuki, A, Watanabe, N, Iwatani, Y.
Deposit date:2012-02-22
Release date:2012-10-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The APOBEC3C crystal structure and the interface for HIV-1 Vif binding.
Nat.Struct.Mol.Biol., 19, 2012
2DCN
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BU of 2dcn by Molmil
Crystal structure of 2-keto-3-deoxygluconate kinase from Sulfolobus tokodaii complexed with 2-keto-6-phosphogluconate (alpha-furanose form)
Descriptor: 6-O-phosphono-beta-D-psicofuranosonic acid, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Okazaki, S, Onda, H, Suzuki, A, Kuramitsu, S, Masui, R, Yamane, T.
Deposit date:2006-01-10
Release date:2006-01-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of 2-keto-3-deoxygluconate kinase from Sulfolobus tokodaii complexed with 2-keto-6-phosphogluconate
To be Published
3AYQ
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Crystal structure of inhibitor bound lysozyme from Meretrix lusoria
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-[(5S,6R)-5-hydroxy-6-(hydroxymethyl)-2-oxo-5,6-dihydro-2H-pyran-3-yl]acetamide, Lysozyme
Authors:Yoneda, K, Kuwano, Y, Usui, T, Ogata, M, Suzuki, A, Araki, T.
Deposit date:2011-05-13
Release date:2012-05-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of inhibitor bound lysozyme from Meretrix lusoria
To be Published
3VM8
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Crystal structure of the human APOBEC3C having HIV-1 Vif-binding interface
Descriptor: Probable DNA dC->dU-editing enzyme APOBEC-3C, ZINC ION
Authors:Kitamura, S, Suzuki, A, Watanabe, N, Iwatani, Y.
Deposit date:2011-12-09
Release date:2012-10-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the human APOBEC3C having HIV-1 Vif-binding interface
To be Published
3X3H
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BU of 3x3h by Molmil
Crystal Structure of the Manihot esculenta Hydroxynitrile Lyase (MeHNL) 3KP (K176P, K199P, K224P) triple mutant
Descriptor: (S)-hydroxynitrile lyase
Authors:Cielo, C.B.C, Yamane, T, Asano, Y, Dadashipour, M, Suzuki, A, Mizushima, T, Komeda, H, Okazaki, S.
Deposit date:2015-01-21
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Crystallographic Studies of Manihot esculenta hydroxynitrile lyase Lysine-to-Proline mutants
TO BE PUBLISHED
3WPR
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BU of 3wpr by Molmil
Acinetobacter sp. Tol 5 AtaA N-terminal half of C-terminal stalk fused to GCN4 adaptors (CstalkN)
Descriptor: Trimeric autotransporter adhesin
Authors:Koiwai, K, Hartmann, M.D, Yoshimoto, S, Nur 'Izzah, N, Suzuki, A, Linke, D, Lupas, A.N, Hori, K.
Deposit date:2014-01-15
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural Basis for Toughness and Flexibility in the C-terminal Passenger Domain of an Acinetobacter Trimeric Autotransporter Adhesin.
J.Biol.Chem., 291, 2016
3WPO
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Acinetobacter sp. Tol 5 AtaA YDD-DALL3 domains in C-terminal stalk fused to GCN4 adaptors (CstalkC1i)
Descriptor: CHLORIDE ION, Trimeric autotransporter adhesin
Authors:Koiwai, K, Hartmann, M.D, Yoshimoto, S, Nur 'Izzah, N, Suzuki, A, Linke, D, Lupas, A.N, Hori, K.
Deposit date:2014-01-14
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Structural Basis for Toughness and Flexibility in the C-terminal Passenger Domain of an Acinetobacter Trimeric Autotransporter Adhesin.
J.Biol.Chem., 291, 2016

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