Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 634 results

2GM8
DownloadVisualize
BU of 2gm8 by Molmil
TenA Homolog/Thi-4 Thiaminase complexed with product 4-amino-5-hydroxymethyl-2-methylpyrimidine
Descriptor: 1,2-ETHANEDIOL, 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE, tenA homolog/Thi-4 Thiaminase
Authors:Sawaya, M.R, Chan, S, Han, G.W, Perry, L.J, Pashkov, I.
Deposit date:2006-04-06
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of a TenA Homolog/Thi-4 Thiaminase from Pyrobaculum Aerophilum
To be Published
2GM7
DownloadVisualize
BU of 2gm7 by Molmil
TenA Homolog/Thi-4 Thiaminase from Pyrobaculum Aerophilum
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, GLYCEROL, PHOSPHATE ION, ...
Authors:Sawaya, M.R, Chan, S, Han, G.W, Perry, L.J.
Deposit date:2006-04-06
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of a Ten A Homolog/Thi-4 Thiaminase from Pyrobaculum Aerophilum
To be Published
3VCD
DownloadVisualize
BU of 3vcd by Molmil
Computationally Designed Self-assembling Octahedral Cage protein, O333, Crystallized in space group R32
Descriptor: CHLORIDE ION, Propanediol utilization polyhedral body protein PduT, SULFATE ION
Authors:Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2012-01-03
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012
7ROJ
DownloadVisualize
BU of 7roj by Molmil
Amyloid-related segment of alphaB-crystallin residues 90-100 with G95W mutation
Descriptor: Alpha-crystallin B chain peptide, GLYCEROL, SODIUM ION, ...
Authors:Sawaya, M.R, Do, T.D, Eisenberg, D.S.
Deposit date:2021-07-30
Release date:2022-01-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Atomic view of an amyloid dodecamer exhibiting selective cellular toxic vulnerability in acute brain slices.
Protein Sci., 31, 2022
4ZAR
DownloadVisualize
BU of 4zar by Molmil
Crystal Structure of Proteinase K from Engyodontium albuminhibited by METHOXYSUCCINYL-ALA-ALA-PRO-PHE-CHLOROMETHYL KETONE at 1.15 A resolution
Descriptor: CALCIUM ION, METHOXYSUCCINYL-ALA-ALA-PRO-PHE-CHLOROMETHYL KETONE, bound form, ...
Authors:Sawaya, M.R, Cascio, D, Collazo, M, Bond, C, Cohen, A, DeNicola, A, Eden, K, Jain, K, Leung, C, Lubock, N, McCormick, J, Rosinski, J, Spiegelman, L, Athar, Y, Tibrewal, N, Winter, J, Solomon, S.
Deposit date:2015-04-14
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal Structure of Proteinase K from Engyodontium album inhibited by METHOXYSUCCINYL-ALA-ALA-PRO-PHE-CHLOROMETHYL KETONE at 1.15 A resolution
to be published
7ROL
DownloadVisualize
BU of 7rol by Molmil
Amyloid-related segment of alphaB-crystallin residues 90-100 with G95W mutation, bromo derivative
Descriptor: Alpha-crystallin B chain peptide
Authors:Sawaya, M.R, Do, T.D, Eisenberg, D.S.
Deposit date:2021-07-30
Release date:2022-02-16
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (1.996 Å)
Cite:Atomic view of an amyloid dodecamer exhibiting selective cellular toxic vulnerability in acute brain slices.
Protein Sci., 31, 2022
1BPY
DownloadVisualize
BU of 1bpy by Molmil
HUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA AND DDCTP
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*DOC)-3'), ...
Authors:Sawaya, M.R, Pelletier, H, Prasad, R, Wilson, S.H, Kraut, J.
Deposit date:1997-04-15
Release date:1997-06-16
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism.
Biochemistry, 36, 1997
1BPX
DownloadVisualize
BU of 1bpx by Molmil
DNA POLYMERASE BETA/DNA COMPLEX
Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*TP*CP*GP*G)-3'), ...
Authors:Sawaya, M.R, Prasad, R, Wilson, S.H, Kraut, J, Pelletier, H.
Deposit date:1997-04-11
Release date:1997-06-16
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism.
Biochemistry, 36, 1997
1BPZ
DownloadVisualize
BU of 1bpz by Molmil
HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA
Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*CP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*G)-3'), ...
Authors:Sawaya, M.R, Prasad, R, Wilson, S.H, Kraut, J, Pelletier, H.
Deposit date:1997-04-14
Release date:1997-06-16
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism.
Biochemistry, 36, 1997
5HA7
DownloadVisualize
BU of 5ha7 by Molmil
Human Aldose Reductase in Complex with NADP+ and WY14643 in Space Group P212121
Descriptor: 2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sawaya, M.R, Cascio, D, Balendiran, G.K.
Deposit date:2015-12-30
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Characterization of WY 14,643 and its Complex with Aldose Reductase.
Sci Rep, 6, 2016
5HW9
DownloadVisualize
BU of 5hw9 by Molmil
Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group P21
Descriptor: Green fluorescent protein
Authors:Sawaya, M.R, Heller, D.M, McPartland, L, Hochschild, A, Eisenberg, D.S.
Deposit date:2016-01-29
Release date:2017-02-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments
to be published
5HBD
DownloadVisualize
BU of 5hbd by Molmil
Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group C2
Descriptor: Green fluorescent protein
Authors:Sawaya, M.R, Hochschild, A, Heller, D.M, McPartland, L, Eisenberg, D.S.
Deposit date:2015-12-31
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments
to be published
5HGE
DownloadVisualize
BU of 5hge by Molmil
Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group P212121
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Green fluorescent protein
Authors:Sawaya, M.R, Heller, D.M, McPartland, L, Hochschild, A, Eisenberg, D.S.
Deposit date:2016-01-08
Release date:2017-01-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.863 Å)
Cite:Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments
to be published
8DDG
DownloadVisualize
BU of 8ddg by Molmil
FYF peptide forms a standard beta-sheet
Descriptor: PHE-TYR-PHE
Authors:Sawaya, M.R, Hazari, A, Eisenberg, D.E, Vlahakis, N.W.
Deposit date:2022-06-18
Release date:2022-09-28
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (0.9 Å)
Cite:The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022
8DDF
DownloadVisualize
BU of 8ddf by Molmil
Quasi-racemic mixture of L-FWF and D-FYF peptide reveals rippled beta-sheet
Descriptor: 1,1,1,3,3,3-hexafluoropropan-2-ol, DPN-DTY-DPN, PHE-TRP-PHE
Authors:Sawaya, M.R, Hazari, A, Eisenberg, D.E.
Deposit date:2022-06-18
Release date:2022-09-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022
8DDH
DownloadVisualize
BU of 8ddh by Molmil
Racemic mixture of FYF peptide reveals rippled beta-sheet
Descriptor: PHE-TYR-PHE
Authors:Sawaya, M.R, Hazari, A, Eisenberg, D.E.
Deposit date:2022-06-18
Release date:2022-09-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022
4DDF
DownloadVisualize
BU of 4ddf by Molmil
Computationally Designed Self-assembling Octahedral Cage protein, O333, Crystallized in space group P4
Descriptor: CHLORIDE ION, Propanediol utilization polyhedral body protein PduT, SULFATE ION
Authors:Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2012-01-18
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012
4EGG
DownloadVisualize
BU of 4egg by Molmil
Computationally Designed Self-assembling tetrahedron protein, T310
Descriptor: GLYCEROL, Putative acetyltransferase SACOL2570
Authors:Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2012-03-30
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012
1RA9
DownloadVisualize
BU of 1ra9 by Molmil
DIHYDROFOLATE REDUCTASE COMPLEXED WITH NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE (OXIDIZED FORM)
Descriptor: DIHYDROFOLATE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Sawaya, M.R, Kraut, J.
Deposit date:1996-10-28
Release date:1996-12-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Loop and subdomain movements in the mechanism of Escherichia coli dihydrofolate reductase: crystallographic evidence.
Biochemistry, 36, 1997
1RE7
DownloadVisualize
BU of 1re7 by Molmil
DIHYDROFOLATE REDUCTASE COMPLEXED WITH FOLATE
Descriptor: DIHYDROFOLATE REDUCTASE, FOLIC ACID
Authors:Sawaya, M.R.
Deposit date:1996-11-01
Release date:1996-12-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Loop and subdomain movements in the mechanism of Escherichia coli dihydrofolate reductase: crystallographic evidence.
Biochemistry, 36, 1997
1RF7
DownloadVisualize
BU of 1rf7 by Molmil
STRUCTURE OF DIHYDROFOLATE REDUCTASE COMPLEXED WITH DIHYDROFOLATE
Descriptor: CHLORIDE ION, DIHYDROFOLATE REDUCTASE, DIHYDROFOLIC ACID, ...
Authors:Sawaya, M.R.
Deposit date:1996-10-24
Release date:1997-03-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Loop and subdomain movements in the mechanism of Escherichia coli dihydrofolate reductase: crystallographic evidence.
Biochemistry, 36, 1997
1RB2
DownloadVisualize
BU of 1rb2 by Molmil
DIHYDROFOLATE REDUCTASE COMPLEXED WITH FOLATE AND NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE (OXIDIZED FORM)
Descriptor: DIHYDROFOLATE REDUCTASE, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Sawaya, M.R, Kraut, J.
Deposit date:1996-11-26
Release date:1997-03-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Loop and subdomain movements in the mechanism of Escherichia coli dihydrofolate reductase: crystallographic evidence.
Biochemistry, 36, 1997
1RG7
DownloadVisualize
BU of 1rg7 by Molmil
DIHYDROFOLATE REDUCTASE COMPLEXED WITH METHOTREXATE
Descriptor: DIHYDROFOLATE REDUCTASE, METHOTREXATE
Authors:Sawaya, M.R, Kraut, J.
Deposit date:1996-11-27
Release date:1997-03-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Loop and subdomain movements in the mechanism of Escherichia coli dihydrofolate reductase: crystallographic evidence.
Biochemistry, 36, 1997
1RH3
DownloadVisualize
BU of 1rh3 by Molmil
DIHYDROFOLATE REDUCTASE COMPLEXED WITH METHOTREXATE AND NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE (REDUCED FORM)
Descriptor: DIHYDROFOLATE REDUCTASE, METHOTREXATE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Sawaya, M.R, Kraut, J.
Deposit date:1996-11-27
Release date:1997-03-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Loop and subdomain movements in the mechanism of Escherichia coli dihydrofolate reductase: crystallographic evidence.
Biochemistry, 36, 1997
4DCL
DownloadVisualize
BU of 4dcl by Molmil
Computationally Designed Self-assembling tetrahedron protein, T308, Crystallized in space group F23
Descriptor: Putative acetyltransferase SACOL2570
Authors:Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
Deposit date:2012-01-17
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon