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PDB: 105 results

1E57
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PHYSALIS MOTTLE VIRUS: EMPTY CAPSID
Descriptor: PHYSALIS MOTTLE VIRUS
Authors:Krishna, S.S, Sastri, M, Savithri, H.S, Murthy, M.R.N.
Deposit date:2000-07-18
Release date:2001-04-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Studies on the Empty Capsids of Physalis Mottle Virus
J.Mol.Biol., 307, 2001
2XPJ
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Crystal structure of Physalis Mottle Virus with intact ordered RNA
Descriptor: 5'-R(CP*CP*CP)-3', COAT PROTEIN
Authors:Sagurthi, S.R, Rajaram, V, Savithri, H.S, Murthy, M.R.N.
Deposit date:2010-08-26
Release date:2010-09-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structure of Natural Bottom Component of Phmv
To be Published
3O8J
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Crystal structure of 2-methylcitrate synthase (PrpC) from Salmonella typhimurium
Descriptor: 2-methylcitrate synthase, GLYCEROL
Authors:Chittori, S, Savithri, H.S, Murthy, M.R.N.
Deposit date:2010-08-03
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure of Salmonella typhimurium 2-methylcitrate synthase: Insights on domain movement and substrate specificity
J.Struct.Biol., 174, 2011
1QJZ
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Three Dimensional Structure of Physalis Mottle Virus : Implications for the Viral Assembly
Descriptor: COAT PROTEIN
Authors:Krishna, S.S, Hiremath, C.N, Munshi, S.K, Prahadeeswaran, D, Sastri, M, Savithri, H.S, Murthy, M.R.N.
Deposit date:1999-07-07
Release date:1999-07-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Three Dimensional Structure of Physalis Movirus: Implications for the Viral Assembly
J.Mol.Biol., 289, 1999
6LXF
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Aromatic interactions drive the coupled folding and binding of the intrinsically disordered Sesbania mosaic virus VPg protein.
Descriptor: Polyprotein
Authors:Dixit, K, Karanth, N.M, Nair, S, Kumari, K, Chakrabarti, K.S, Savithri, H.S, Sarma, S.P.
Deposit date:2020-02-11
Release date:2021-01-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Aromatic Interactions Drive the Coupled Folding and Binding of the Intrinsically Disordered Sesbania mosaic Virus VPg Protein.
Biochemistry, 59, 2020
1KKJ
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Crystal Structure of Serine Hydroxymethyltransferase from B.stearothermophilus
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Serine Hydroxymethyltransferase
Authors:Trivedi, V, Gupta, A, Jala, V.R, Saravanan, P, Rao, G.S.J, Rao, N.A, Savithri, H.S, Subramanya, H.S.
Deposit date:2001-12-09
Release date:2002-07-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of binary and ternary complexes of serine hydroxymethyltransferase from Bacillus stearothermophilus: insights into the catalytic mechanism.
J.Biol.Chem., 277, 2002
1KKP
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Crystal Structure of Serine Hydroxymethyltransferase complexed with Serine
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SERINE, Serine Hydroxymethyltransferase
Authors:Trivedi, V, Gupta, A, Jala, V.R, Saravanan, P, Rao, G.S.J, Rao, N.A, Savithri, H.S, Subramanya, H.S.
Deposit date:2001-12-10
Release date:2002-07-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of binary and ternary complexes of serine hydroxymethyltransferase from Bacillus stearothermophilus: insights into the catalytic mechanism.
J.Biol.Chem., 277, 2002
1KL1
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Crystal Structure of Serine Hydroxymethyltransferase Complexed with Glycine
Descriptor: GLYCINE, PYRIDOXAL-5'-PHOSPHATE, Serine Hydroxymethyltransferase
Authors:Trivedi, V, Gupta, A, Jala, V.R, Saravanan, P, Rao, G.S.J, Rao, N.A, Savithri, H.S, Subramanya, H.S.
Deposit date:2001-12-11
Release date:2002-07-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of binary and ternary complexes of serine hydroxymethyltransferase from Bacillus stearothermophilus: insights into the catalytic mechanism.
J.Biol.Chem., 277, 2002
6M78
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Aromatic interactions drive the coupled folding and binding of the intrinsically disordered Sesbania mosaic virus VPg protein
Descriptor: Polyprotein
Authors:Dixit, K, Karanth, N.M, Nair, S, Kumari, K, Chakraborti, K.S, Savithri, H.S, Sarma, S.P.
Deposit date:2020-03-17
Release date:2021-01-27
Method:SOLUTION NMR
Cite:Aromatic Interactions Drive the Coupled Folding and Binding of the Intrinsically Disordered Sesbania mosaic Virus VPg Protein.
Biochemistry, 59, 2020
1KL2
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Crystal Structure of Serine Hydroxymethyltransferase Complexed with Glycine and 5-formyl tetrahydrofolate
Descriptor: GLYCINE, N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Trivedi, V, Gupta, A, Jala, V.R, Saravanan, P, Rao, G.S.J, Rao, N.A, Savithri, H.S, Subramanya, H.S.
Deposit date:2001-12-11
Release date:2002-07-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of binary and ternary complexes of serine hydroxymethyltransferase from Bacillus stearothermophilus: insights into the catalytic mechanism.
J.Biol.Chem., 277, 2002
2PB2
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Structure of biosynthetic N-acetylornithine aminotransferase from Salmonella typhimurium: studies on substrate specificity and inhibitor binding
Descriptor: 1,2-ETHANEDIOL, Acetylornithine/succinyldiaminopimelate aminotransferase, GLYCEROL, ...
Authors:Rajaram, V, Ratna Prasuna, P, Savithri, H.S, Murthy, M.R.N.
Deposit date:2007-03-28
Release date:2007-12-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure of biosynthetic N-acetylornithine aminotransferase from Salmonella typhimurium: Studies on substrate specificity and inhibitor binding
Proteins, 70, 2007
2PB0
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Structure of biosynthetic N-acetylornithine aminotransferase from Salmonella typhimurium: studies on substrate specificity and inhibitor binding
Descriptor: 1,2-ETHANEDIOL, Acetylornithine/succinyldiaminopimelate aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Rajaram, V, Ratna Prasuna, P, Savithri, H.S, Murthy, M.R.N.
Deposit date:2007-03-28
Release date:2007-12-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure of biosynthetic N-acetylornithine aminotransferase from Salmonella typhimurium: Studies on substrate specificity and inhibitor binding
Proteins, 70, 2007
3H1W
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Crystal structure of mannose 6-phosphate isomerase bound with zinc and yttrium
Descriptor: 1,2-ETHANEDIOL, Mannose-6-phosphate isomerase, YTTRIUM ION, ...
Authors:Sagurthi, S.R, Giri, G, Savithri, H.S, Murthy, M.R.N.
Deposit date:2009-04-14
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of mannose 6-phosphate isomerase fromSalmonella typhimurium bound to metal atoms and substrate: Implications for catalytic mechanism
To be published
3H1Y
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Crystal structure of mannose 6-phosphate isomerase from Salmonella typhimurium bound to substrate (f6p)and metal atom (zn)
Descriptor: 1,2-ETHANEDIOL, 6-O-phosphono-beta-D-fructofuranose, Mannose-6-phosphate isomerase, ...
Authors:Sagurthi, S.R, Giri, G, Savithri, H.S, Murthy, M.R.N.
Deposit date:2009-04-14
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of mannose 6-phosphate isomerase from Salmonella typhimurium bound to metal atoms and substrate: Implications for catalytic mechanism
To be published
3H1M
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Crystal structure of mannose 6-phosphate isomerase (holo; zinc bound)
Descriptor: 1,2-ETHANEDIOL, Mannose-6-phosphate isomerase, ZINC ION
Authors:Sagurthi, S.R, Giri, G, Savithri, H.S, Murthy, M.R.N.
Deposit date:2009-04-13
Release date:2009-05-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of mannose 6-phosphate isomerase fromSalmonella typhimurium bound to metal atoms and substrate: Implications for catalytic mechanism
To be published
5YRX
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Crystal structure of a hypothetical protein Rv3716c from Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Nucleoid-associated protein Rv3716c
Authors:Deka, G, Gopalan, A, Prabhavathi, M, Savithri, H.S, Raja, A, Murthy, M.R.N.
Deposit date:2017-11-10
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and biophysical characterization of Rv3716c, a hypothetical protein from Mycobacterium tuberculosis
Biochem. Biophys. Res. Commun., 495, 2018
2E1Z
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Crystal structure of Salmonella typhimurium propionate kinase (TdcD) in complex with diadenosine tetraphosphate (Ap4A) obtained after co-crystallization with ATP
Descriptor: 1,2-ETHANEDIOL, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Propionate Kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-11-04
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
2E1Y
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Crystal structure of propionate kinase (TdcD) from Salmonella typhimurium
Descriptor: Propionate kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-11-04
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
2E20
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Crystal structure of Salmonella typhimurium propionate kinase (TdcD) in complex with diadenosine tetraphosphate (Ap4A)
Descriptor: 1,2-ETHANEDIOL, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Propionate Kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-11-04
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
5ZWB
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Crystal structure of Pyridoxal kinase (PdxK) from Salmonella typhimurium in complex with ADP, PL-linked to Lys233 via a Schiff base
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Deka, G, Benazir, J.F, Kalyani, J.N, Savithri, H.S, Murthy, M.R.N.
Deposit date:2018-05-14
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional studies on Salmonella typhimurium pyridoxal kinase: the first structural evidence for the formation of Schiff base with the substrate.
Febs J., 286, 2019
5ZW9
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Crystal structure of Pyridoxal kinase (PdxK) from Salmonella typhimurium
Descriptor: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Deka, G, Benazir, J.F, Kalyani, J.N, Savithri, H.S, Murthy, M.R.N.
Deposit date:2018-05-14
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional studies on Salmonella typhimurium pyridoxal kinase: the first structural evidence for the formation of Schiff base with the substrate.
Febs J., 286, 2019
5ZWA
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Crystal structure of Pyridoxal kinase (PdxK) from Salmonella typhimurium in complex with ADP, PL-linked to Lys233 via Schiff base in protomer A and the product (PLP) in protomer B
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Deka, G, Benazir, J.F, Kalyani, J.N, Savithri, H.S, Murthy, M.R.N.
Deposit date:2018-05-14
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural and functional studies on Salmonella typhimurium pyridoxal kinase: the first structural evidence for the formation of Schiff base with the substrate.
Febs J., 286, 2019
5F0V
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X-ray crystal structure of a thiolase from Escherichia coli at 1.8 A resolution
Descriptor: 1,2-ETHANEDIOL, Acetyl-CoA acetyltransferase
Authors:Ithayaraja, M, Neelanjana, J, Wierenga, R, Savithri, H.S, Murthy, M.R.N.
Deposit date:2015-11-28
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a thiolase from Escherichia coli at 1.8 angstrom resolution.
Acta Crystallogr.,Sect.F, 72, 2016
5F38
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X-ray crystal structure of a thiolase from Escherichia coli at 1.8 A resolution
Descriptor: 1,2-ETHANEDIOL, Acetyl-CoA acetyltransferase, COENZYME A, ...
Authors:Ithayaraja, M, Neelanjana, J, Wierenga, R, Savithri, H.S, Murthy, M.R.N.
Deposit date:2015-12-02
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a thiolase from Escherichia coli at 1.8 angstrom resolution.
Acta Crystallogr.,Sect.F, 72, 2016
2GN1
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Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 2.2A resolution (Triclinic form with one dimer of TdcB in the asymmetric unit)
Descriptor: SODIUM ION, Threonine dehydratase catabolic
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-04-09
Release date:2006-11-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006

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