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PDB: 301 results
6WJL
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BU of 6wjl by Molmil
Crystal structure of Glypican-2 core protein in complex with D3 Fab
Descriptor: D3 Fab Heavy chain, D3 Fab Light Chain, Glypican-2, ...
Authors:Raman, S, Maris, J.M, Bosse, K.R, Julien, J.P.
Deposit date:2020-04-14
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A GPC2 antibody-drug conjugate is efficacious against neuroblastoma and small-cell lung cancer via binding a conformational epitope.
Cell Rep Med, 2, 2021
6O3A
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BU of 6o3a by Molmil
Crystal structure of Frizzled 7 CRD in complex with F7.B Fab
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, ...
Authors:Raman, S, Beilschmidt, M, Fransson, J, Julien, J.P.
Deposit date:2019-02-26
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-guided design fine-tunes pharmacokinetics, tolerability, and antitumor profile of multispecific frizzled antibodies.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6O3B
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BU of 6o3b by Molmil
Crystal structure of Frizzled 7 CRD in complex with F6 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab F6, Heavy chain, ...
Authors:Raman, S, Beilschmidt, M, Fransson, J, Julien, J.P.
Deposit date:2019-02-26
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-guided design fine-tunes pharmacokinetics, tolerability, and antitumor profile of multispecific frizzled antibodies.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6O39
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BU of 6o39 by Molmil
Crystal structure of Frizzled 5 CRD in complex with F2.I Fab
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Raman, S, Beilschmidt, M, Fransson, J, Julien, J.P.
Deposit date:2019-02-26
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-guided design fine-tunes pharmacokinetics, tolerability, and antitumor profile of multispecific frizzled antibodies.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
7N0A
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BU of 7n0a by Molmil
Structure of Human Leukaemia Inhibitory Factor with Fab MSC1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Leukemia inhibitory factor, ...
Authors:Raman, S, Bosch, A, Fransson, J, Julien, J.P.
Deposit date:2021-05-25
Release date:2022-06-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Therapeutic Targeting of LIF Overcomes Macrophage-mediated Immunosuppression of the Local Tumor Microenvironment.
Clin.Cancer Res., 29, 2023
4XKK
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BU of 4xkk by Molmil
Crystal structure of N-terminal domain of Hsp90 from Dictyostelium discoideum
Descriptor: Heat shock cognate 90 kDa protein
Authors:Raman, S, Suguna, K.
Deposit date:2015-01-12
Release date:2015-01-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Heat shock protein 90 regulates development in Dictyostelium discoideum
J. Mol. Biol., 383, 2008
4XCL
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BU of 4xcl by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with AGS
Descriptor: Heat shock cognate 90 kDa protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-18
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XC0
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BU of 4xc0 by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with ACP
Descriptor: DI(HYDROXYETHYL)ETHER, Heat shock cognate 90 kDa protein, MAGNESIUM ION, ...
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-17
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4X9L
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BU of 4x9l by Molmil
N-terminal domain of Heat shock protein 90 from Oryza sativa
Descriptor: Heat shock protein, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, TETRAETHYLENE GLYCOL
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-11
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Functional characterization of heat-shock protein 90 from Oryza sativa and crystal structure of its N-terminal domain.
Acta Crystallogr.,Sect.F, 71, 2015
4XE2
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BU of 4xe2 by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with peptide
Descriptor: Heat shock cognate 90 kDa protein
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-22
Release date:2015-12-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90.
Sci Rep, 5, 2015
4XCJ
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BU of 4xcj by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Heat shock cognate 90 kDa protein, MAGNESIUM ION
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-18
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XDM
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BU of 4xdm by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with Geldanamycin
Descriptor: DI(HYDROXYETHYL)ETHER, GELDANAMYCIN, Heat shock cognate 90 kDa protein
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-19
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XD8
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BU of 4xd8 by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with ANP
Descriptor: Heat shock cognate 90 kDa protein, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-19
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XKA
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BU of 4xka by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in hexagonal form with glycerol
Descriptor: GLYCEROL, Heat shock cognate 90 kDa protein, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Raman, S, Suguna, K.
Deposit date:2015-01-10
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XKO
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BU of 4xko by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in hexagonal form with PEG
Descriptor: DI(HYDROXYETHYL)ETHER, Heat shock cognate 90 kDa protein, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Raman, S, Suguna, K.
Deposit date:2015-01-12
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.455 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
2F9U
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BU of 2f9u by Molmil
HCV NS3 protease domain with NS4a peptide and a ketoamide inhibitor with a P2 norborane
Descriptor: 1,1-DIMETHYLETHYL [1-CYCLOHEXYL-2-[3-[[[1-[2-[[2-[[2-(DIMETHYLAMINO)-2-OXO-1-PHENYLETHYL]AMINO]-2-OXOETHYL]AMINO]-1,2-DIOXOETHYL]PENTYL]AMINO]CARBONYL]-2-AZABICYCLO[2.2.1]HEPTAN-2-YL]-2-OXOETHYL]CARBAMATE, NS3 protease/helicase', ZINC ION, ...
Authors:Venkatraman, S, Njoroge, F.G, Wu, W, Girijavallabhan, V, Prongay, A.J, Butkiewicz, N, Pichardo, J.
Deposit date:2005-12-06
Release date:2006-06-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Novel Inhibitors of Hepatitis C NS3-NS4A Serine Protease Derived from 2-Aza-bicyclo[2.2.1]heptane-3-carboxylic acid.
Bioorg.Med.Chem.Lett., 16, 2006
6CVM
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BU of 6cvm by Molmil
Atomic resolution cryo-EM structure of beta-galactosidase
Descriptor: 2-phenylethyl 1-thio-beta-D-galactopyranoside, Beta-galactosidase, MAGNESIUM ION, ...
Authors:Subramaniam, S, Bartesaghi, A, Banerjee, S, Zhu, X, Milne, J.L.S.
Deposit date:2018-03-28
Release date:2018-05-30
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (1.9 Å)
Cite:Atomic Resolution Cryo-EM Structure of beta-Galactosidase.
Structure, 26, 2018
8ELD
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BU of 8eld by Molmil
Bacteriophage HRP29 Icosohedral Reconstruction
Descriptor: Gp37, Gp47, Gp48
Authors:Subramanian, S, Bergland Drarvik, S.M, Parent, K.N.
Deposit date:2022-09-23
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of Shigella bacteriophage HRP29
To Be Published
8EM6
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BU of 8em6 by Molmil
Bacteriophage HRP29 Procapsid Icosohedral Reconstruction
Descriptor: Gp37
Authors:Subramanian, S, Bergland Drarvik, S.M, Parent, K.N.
Deposit date:2022-09-26
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of Shigella bacteriophage HRP29
To Be Published
8ES4
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BU of 8es4 by Molmil
Focused reconstruction of HRP29 tail
Descriptor: Gp35, Gp39, Gp40, ...
Authors:Subramanian, S, Bergland Drarvik, S.M, Parent, K.N.
Deposit date:2022-10-13
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of Shigella bacteriophage HRP29
To Be Published
3C0K
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BU of 3c0k by Molmil
Crystal Structure of a ribosomal RNA methyltranferase
Descriptor: UPF0064 protein yccW
Authors:Subramanian, S, Jayaraman, S, Bujnicki, J.
Deposit date:2008-01-21
Release date:2008-11-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the Escherichia coli 23S rRNA:m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes
J.Mol.Biol., 383, 2008
1Z0H
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BU of 1z0h by Molmil
N-terminal helix reorients in recombinant C-fragment of Clostridium botulinum type B
Descriptor: Botulinum neurotoxin type B
Authors:Jayaraman, S, Eswarmoorthy, S, Ashraf, S.A, Smith, L.A, Swaminathan, S.
Deposit date:2005-03-01
Release date:2005-03-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:N-terminal helix reorients in recombinant C-fragment of Clostridium botulinum type B.
Biochem.Biophys.Res.Commun., 330, 2005
8G1R
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BU of 8g1r by Molmil
A Vibrio cholerae viral satellite enables efficient horizontal transfer by using an external scaffold to assemble hijacked coat proteins into small capsids
Descriptor: Serine protease, major head protein
Authors:Subramanian, S, Boyd, C.M, Seed, K.D, Parent, K.N.
Deposit date:2023-02-02
Release date:2024-01-17
Last modified:2024-01-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A Vibrio cholerae viral satellite maximizes its spread and inhibits phage by remodeling hijacked phage coat proteins into small capsids.
Elife, 12, 2024
3GTV
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BU of 3gtv by Molmil
Human-mouse SOD1 chimera
Descriptor: Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Seetharaman, S.V, Taylor, A.B, Hart, P.J.
Deposit date:2009-03-28
Release date:2010-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of mouse SOD1 and human/mouse SOD1 chimeras.
Arch.Biochem.Biophys., 503, 2010
6AIE
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BU of 6aie by Molmil
Crystal structure of a new form of RsmD-like RNA methyl transferase from Mycobacterium tuberculosis determined at 1.74 A resolution
Descriptor: Putative methyltransferase
Authors:Venkataraman, S, Dhankar, A, Sinha, K.M, Manivasakan, P, Iqbal, N, Singh, T.P, Prasad, B.V.L.S.
Deposit date:2018-08-22
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of a new form of RsmD-like RNA methyl transferase from Mycobacterium tuberculosis determined at 1.74 A resolution
To Be Published

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