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PDB: 14 results

4Y1M
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BU of 4y1m by Molmil
An Escherichia coli yybP-ykoY Mn riboswitch in the Mn2+-free state
Descriptor: E. coli yybP-ykoY riboswitch, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Price, I.R, Ke, A.
Deposit date:2015-02-08
Release date:2015-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mn(2+)-Sensing Mechanisms of yybP-ykoY Orphan Riboswitches.
Mol.Cell, 57, 2015
4Y1I
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BU of 4y1i by Molmil
Lactococcus lactis yybP-ykoY Mn riboswitch bound to Mn2+
Descriptor: BARIUM ION, GUANOSINE-5'-TRIPHOSPHATE, Lactococcus lactis yybP-ykoY riboswitch, ...
Authors:Price, I.R, Ke, A.
Deposit date:2015-02-07
Release date:2015-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Mn(2+)-Sensing Mechanisms of yybP-ykoY Orphan Riboswitches.
Mol.Cell, 57, 2015
7KPF
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BU of 7kpf by Molmil
NME2 bound to myristoyl-CoA
Descriptor: GLYCEROL, MAGNESIUM ION, Nucleoside diphosphate kinase B, ...
Authors:Price, I.R, Lin, H.
Deposit date:2020-11-11
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:A Chemical Proteomic Approach reveals the regulation of NME1/2 and cancer metastasis by Long-Chain Fatty Acyl Coenzyme A
To Be Published
7UZ0
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BU of 7uz0 by Molmil
AntiT-tRNA flip UCCA
Descriptor: AntiT-tRNA flip UCCA, MAGNESIUM ION, STRONTIUM ION
Authors:Price, I.R, Grigg, J.C, Ke, A.
Deposit date:2022-05-07
Release date:2022-06-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:tRNA Fusion to Streamline RNA Structure Determination: Case Studies in Probing Aminoacyl-tRNA Sensing Mechanisms by the T-Box Riboswitch
Crystals, 12, 2022
6PAV
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BU of 6pav by Molmil
Structure of Human NMT1 with products CoA and myristoyl-lysine peptide with acetylated N-terminus
Descriptor: ARF6 peptide, COENZYME A, GLYCEROL, ...
Authors:Price, I.R, Lin, H.
Deposit date:2019-06-12
Release date:2020-03-11
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:NMT1 and NMT2 are lysine myristoyltransferases regulating the ARF6 GTPase cycle.
Nat Commun, 11, 2020
6PAU
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BU of 6pau by Molmil
Structure of Human NMT2 with myristoyl-lysine peptide and CoA products
Descriptor: 4'-diphospho pantetheine, Arf6 peptide, GLYCEROL, ...
Authors:Price, I.R, Lin, H.
Deposit date:2019-06-11
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:NMT1 and NMT2 are lysine myristoyltransferases regulating the ARF6 GTPase cycle.
Nat Commun, 11, 2020
4Y1J
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BU of 4y1j by Molmil
Lactococcus lactis yybP-ykoY Mn riboswitch A41U binding site mutant in presence of Mn2+
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, STRONTIUM ION, ...
Authors:Price, I.R, Ke, A.
Deposit date:2015-02-07
Release date:2015-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Mn(2+)-Sensing Mechanisms of yybP-ykoY Orphan Riboswitches.
Mol.Cell, 57, 2015
6NR0
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BU of 6nr0 by Molmil
SIRT2(56-356) with covalent intermediate between mechanism-based inhibitor Glucose-TM-1beta and 1'-SH ADP-ribose
Descriptor: GLYCEROL, NAD-dependent protein deacetylase sirtuin-2, N~2~-[3-(2-hydroxyethoxy)propanoyl]-N-phenyl-N~6~-tetradecanethioyl-L-lysinamide, ...
Authors:Price, I.R, Hong, J.
Deposit date:2019-01-22
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A Glycoconjugated SIRT2 Inhibitor with Aqueous Solubility Allows Structure-Based Design of SIRT2 Inhibitors.
Acs Chem.Biol., 14, 2019
6N2V
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BU of 6n2v by Molmil
Manganese riboswitch from Xanthmonas oryzae bound to Mn(II)
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, SODIUM ION, ...
Authors:Price, I.R, Ke, A.
Deposit date:2018-11-14
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Local-to-global signal transduction at the core of a Mn2+sensing riboswitch.
Nat Commun, 10, 2019
6JXM
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BU of 6jxm by Molmil
Crystal Structure of phi29 pRNA domain II
Descriptor: BARIUM ION, MAGNESIUM ION, RNA (97-mer)
Authors:Cai, R, Price, I.R, Ding, F, Wu, F, Chen, T, Zhang, Y, Liu, G, Jardine, P.J, Lu, C, Ke, A.
Deposit date:2019-04-24
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:ATP/ADP modulates gp16-pRNA conformational change in the Phi29 DNA packaging motor.
Nucleic Acids Res., 47, 2019
7UQ6
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BU of 7uq6 by Molmil
tRNA T-box antiterminator fusion, construct #4
Descriptor: BARIUM ION, POTASSIUM ION, RNA (86-MER)
Authors:Grigg, J.C, Price, I.R, Ke, A.
Deposit date:2022-04-19
Release date:2022-06-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.951 Å)
Cite:tRNA Fusion to Streamline RNA Structure Determination: Case Studies in Probing Aminoacyl-tRNA Sensing Mechanisms by the T-Box Riboswitch
Crystals, 12, 2022
5M99
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BU of 5m99 by Molmil
Functional Characterization and Crystal Structure of Thermostable Amylase from Thermotoga petrophila, reveals High Thermostability and an Archaic form of Dimerization
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-amylase, ...
Authors:Hameed, U, Price, I, Mirza, O.A.
Deposit date:2016-11-01
Release date:2017-07-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Functional characterization and crystal structure of thermostable amylase from Thermotoga petrophila, reveals high thermostability and an unusual form of dimerization.
Biochim. Biophys. Acta, 1865, 2017
6C27
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BU of 6c27 by Molmil
SAM-III riboswitch ON-state
Descriptor: COBALT HEXAMMINE(III), SAM-III riboswitch
Authors:Grigg, J.C, Price, I.R, Ke, A.
Deposit date:2018-01-07
Release date:2019-01-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.601 Å)
Cite:Evidence for two-tiered conformation selection in the SAM-III riboswitch
To Be Published
5U3G
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BU of 5u3g by Molmil
Structure of the Dickeya dadantii ykkC riboswitch bound to guanidinium
Descriptor: GUANIDINE, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Battaglia, R.A, Price, I.R, Ke, A.
Deposit date:2016-12-02
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for guanidine sensing by the ykkC family of riboswitches.
RNA, 23, 2017

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PDB entries from 2024-06-12

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