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PDB: 51 results

4N3D
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BU of 4n3d by Molmil
Crystal structure of the dimeric variant EGFP-K162Q in P61 space group
Descriptor: GLYCEROL, Green fluorescent protein, PHOSPHATE ION, ...
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2013-10-07
Release date:2014-08-27
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Three dimensional structure of the dimeric gene-engineered variant of green fluorescent protein egfp-K162Q in P61 crystal space group
Rus.J.Bioorg.Chem., 40, 2014
4ZFS
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BU of 4zfs by Molmil
Phototoxic Fluorescent Protein KillerOrange
Descriptor: KillerOrange
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.
Deposit date:2015-04-21
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore.
Plos One, 10, 2015
2OJK
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BU of 2ojk by Molmil
Crystal Structure of Green Fluorescent Protein from Zoanthus sp at 2.2 A Resolution
Descriptor: GFP-like fluorescent chromoprotein FP506
Authors:Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-01-12
Release date:2007-09-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
4HE4
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BU of 4he4 by Molmil
Crystal structure of the yellow fluorescent protein phiYFP (Phialidium sp.)
Descriptor: Yellow fluorescent protein
Authors:Pletneva, N, Pletnev, S, Pletnev, V.Z.
Deposit date:2012-10-03
Release date:2013-05-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis.
Acta Crystallogr.,Sect.D, 69, 2013
2OGR
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BU of 2ogr by Molmil
Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution
Descriptor: FLUORESCENT PROTEIN FP538
Authors:Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-01-08
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom
Bioorg.Khim., 33
3LVD
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BU of 3lvd by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVC
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BU of 3lvc by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). Colorless form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVA
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BU of 3lva by Molmil
Crystal structure of colorless GFP-like protein from Aequorea coerulescens
Descriptor: GLYCEROL, Green fluorescent protein, SULFATE ION
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
8BVG
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BU of 8bvg by Molmil
Bright fluorescent protein BrUSLEE with subnanosecond fluorescence lifetime
Descriptor: BrUSSLEE, GLYCEROL
Authors:Pletnev, V, Pletneva, N.
Deposit date:2022-12-03
Release date:2023-04-12
Last modified:2023-04-26
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal Structure of Bright Fluorescent Protein BrUSLEE with Subnanosecond Fluorescence Lifetime; Electric and Dynamic Properties.
Int J Mol Sci, 24, 2023
8SXC
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BU of 8sxc by Molmil
Crystal Structure of Fluorescent Protein Fusion Red 2
Descriptor: Far-red Fluorescent Protein Fusion Red 2, GLYCEROL, HEXAETHYLENE GLYCOL, ...
Authors:Pletnev, S, Pletneva, N, Pletnev, V.
Deposit date:2023-05-21
Release date:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Fluorescent Protein Fusion Red 2
To Be Published
6ZQO
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BU of 6zqo by Molmil
EYFP mutant - F165G
Descriptor: G protein/GFP fusion protein, SULFATE ION
Authors:Pletnev, V.Z, Pletnev, S.V, Pletneva, N.V.
Deposit date:2020-07-10
Release date:2021-06-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Amino acid residue at the 165th position tunes EYFP chromophore maturation. A structure-based design.
Comput Struct Biotechnol J, 19, 2021
6UBO
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BU of 6ubo by Molmil
Fluorogen Activating Protein Dib1
Descriptor: 12-(diethylamino)-2,2-bis(fluoranyl)-4,5-dimethyl-5-aza-3-azonia-2-boranuidatricyclo[7.4.0.0^{3,7}]trideca-1(13),3,7,9,11-pentaen-6-one, CITRIC ACID, Outer membrane lipoprotein Blc, ...
Authors:Muslinkina, L, Pletneva, N, Pletnev, V.Z, Pletnev, S.
Deposit date:2019-09-12
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structure-Based Rational Design of Two Enhanced Bacterial Lipocalin Blc Tags for Protein-PAINT Super-resolution Microscopy.
Acs Chem.Biol., 15, 2020
6U1A
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BU of 6u1a by Molmil
Crystal Structure of Fluorescent Protein FusionRed
Descriptor: CALCIUM ION, NICKEL (II) ION, Red fluorescent protein
Authors:Pletnev, S, Muslinkina, L, Pletneva, N, Pletnev, V.Z.
Deposit date:2019-08-15
Release date:2020-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Two independent routes of post-translational chemistry in fluorescent protein FusionRed.
Int.J.Biol.Macromol., 155, 2020
7BHG
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BU of 7bhg by Molmil
Gene-engineered variant of FusionRed with Trp based chromophore - 2.1A
Descriptor: Fluorescent protein FP480
Authors:Pletnev, V.Z, Pletnev, S.V, Pletneva, N.V.
Deposit date:2021-01-11
Release date:2022-03-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Gene-engineered variant of FusionRed with Trp based chromophore - 2.1A
To Be Published
4ZBL
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BU of 4zbl by Molmil
Phototoxic fluorescent protein mKillerOrange
Descriptor: CITRIC ACID, GLYCEROL, Photosesitizer mKillerOrange
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-04-14
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore.
Plos One, 10, 2015
7YZJ
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BU of 7yzj by Molmil
FAB IN COMPLEX WITH ANTIGENIC PEPTIDE OF INTERLEUKIN-2
Descriptor: Antigenic peptide, Heavy chain of FAB fragment, Light chain of FAB fragment
Authors:Pletnev, V, Pletneva, N.
Deposit date:2022-02-20
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Three-Dimensional Structure of Fab Fragment of Monoclonal Antibody LNKB-2 Complexed with Antigenic Nonapeptide from Human Interleukin-2
Russ.J.Bioorganic Chem., 2023
7SF9
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BU of 7sf9 by Molmil
Branchiostoma Floridae Violet Fluorescent Protein
Descriptor: Violet Fluorescent Protein
Authors:Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L.
Deposit date:2021-10-03
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins.
Protein Sci., 31, 2022
7SFA
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BU of 7sfa by Molmil
Branchiostoma floridae fluorescent protein LanFP10A2
Descriptor: Fluorescent protein lanFP10A2
Authors:Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L.
Deposit date:2021-10-03
Release date:2022-03-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins.
Protein Sci., 31, 2022
3GB3
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BU of 3gb3 by Molmil
X-ray structure of genetically encoded photosensitizer KillerRed in native form
Descriptor: KillerRed, SULFATE ION
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-02-18
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
3GL4
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BU of 3gl4 by Molmil
X-ray structure of photobleached killerred
Descriptor: KillerRed
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-03-11
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
4EDS
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BU of 4eds by Molmil
Crystal structure of far-red fluorescent protein eqFP670
Descriptor: far-red fluorescent protein eqFP650
Authors:Pletnev, S, Pletnev, V.Z, Pletneva, N.V.
Deposit date:2012-03-27
Release date:2012-09-05
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.
Acta Crystallogr.,Sect.D, 68, 2012
4EDO
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BU of 4edo by Molmil
Crystal structure of far-red fluorescent protein eqFP650
Descriptor: far-red fluorescent protein eqFP650
Authors:Pletnev, S, Pletnev, V.Z, Pletneva, N.V.
Deposit date:2012-03-27
Release date:2012-09-05
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.
Acta Crystallogr.,Sect.D, 68, 2012
2PXW
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BU of 2pxw by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.4 A Resolution (Transition State)
Descriptor: GFP-like fluorescent chromoprotein FP506
Authors:Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-05-14
Release date:2007-09-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
2PXS
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BU of 2pxs by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.2 A Resolution (Mature State)
Descriptor: GFP-like fluorescent chromoprotein FP506
Authors:Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-05-14
Release date:2007-09-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
5DRF
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BU of 5drf by Molmil
Green/cyan WasCFP-pH5.5 at pH 5.5
Descriptor: GLYCEROL, SODIUM ION, WasCFP-pH5.5 at pH 5.5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-09-15
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore
Russ.J.Bioorganic Chem., 42 (6), 2016

 

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