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PDB: 52 results

1XLY
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BU of 1xly by Molmil
X-RAY STRUCTURE OF THE RNA-BINDING PROTEIN SHE2p
Descriptor: SHE2p
Authors:Niessing, D, Huettelmaier, S, Zenklusen, D, Singer, R.H, Burley, S.K.
Deposit date:2004-09-30
Release date:2004-11-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:She2p is a novel RNA binding protein with a basic helical hairpin motif
Cell(Cambridge,Mass.), 119, 2004
7NTN
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BU of 7ntn by Molmil
The structure of RRM domain of human TRMT2A at 2 A resolution
Descriptor: CHLORIDE ION, SODIUM ION, SULFATE ION, ...
Authors:Davydova, E, Janowski, R, Witzenberger, M, Niessing, D.
Deposit date:2021-03-10
Release date:2022-01-19
Last modified:2022-02-09
Method:X-RAY DIFFRACTION (2.016 Å)
Cite:Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death.
Comput Struct Biotechnol J, 20, 2022
7NTO
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BU of 7nto by Molmil
The structure of RRM domain of human TRMT2A at 1.23 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
Authors:Witzenberger, M, Janowski, R, Davydova, E, Niessing, D.
Deposit date:2021-03-10
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death.
Comput Struct Biotechnol J, 20, 2022
5FGO
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BU of 5fgo by Molmil
Crystal structure of D. melanogaster Pur-alpha repeat III.
Descriptor: CG1507-PB, isoform B, CHLORIDE ION
Authors:Windhager, A, Janowski, R, Niessing, D.
Deposit date:2015-12-21
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of nucleic-acid recognition and double-strand unwinding by the essential neuronal protein Pur-alpha.
Elife, 5, 2016
5FGP
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BU of 5fgp by Molmil
Crystal structure of D. melanogaster Pur-alpha repeat I-II in complex with DNA.
Descriptor: CG1507-PB, isoform B, CHLORIDE ION, ...
Authors:Weber, J, Janowski, R, Niessing, D.
Deposit date:2015-12-21
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of nucleic-acid recognition and double-strand unwinding by the essential neuronal protein Pur-alpha.
Elife, 5, 2016
7PV5
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BU of 7pv5 by Molmil
RBD domain of D. melanogaster tRNA (uracil-5-)-methyltransferase homolog A (TRMT2A)
Descriptor: CHLORIDE ION, FI05218p, SODIUM ION, ...
Authors:Witzenberger, M, Janowski, R, Niessing, D.
Deposit date:2021-10-01
Release date:2023-04-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the RNA-recognition motif of Drosophila melanogaster tRNA (uracil-5-)-methyltransferase homolog A
Acta Crystallogr.,Sect.F, 80, 2024
7P36
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BU of 7p36 by Molmil
X-ray structure of Lactobacillus kefir alcohol dehydrogenase (wild type)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Bischoff, D, Walla, B, Janowski, R, Niessing, D, Weuster-Botz, D.
Deposit date:2021-07-07
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Transfer of a Rational Crystal Contact Engineering Strategy between Diverse Alcohol Dehydrogenases
Crystals, 11, 2021
7P7Y
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BU of 7p7y by Molmil
X-ray structure of Lactobacillus kefir alcohol dehydrogenase mutant Q126K
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Bischoff, D, Walla, B, Janowski, R, Niessing, D, Weuster-Botz, D.
Deposit date:2021-07-21
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Transfer of a Rational Crystal Contact Engineering Strategy between Diverse Alcohol Dehydrogenases
Crystals, 11, 2021
6TV7
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BU of 6tv7 by Molmil
Crystal structure of rsGCaMP in the OFF state (illuminated)
Descriptor: CALCIUM ION, SODIUM ION, rsGCaMP
Authors:Janowski, R, Fuenzalida-Werner, J.P, Mishra, K, Stiel, A.C, Niessing, D.
Deposit date:2020-01-09
Release date:2021-10-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging.
Nat.Biotechnol., 2021
8CHU
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BU of 8chu by Molmil
Crystal structure of human PURA repeat I-II K97E mutant
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Transcriptional activator protein Pur-alpha
Authors:Janowski, R, Niessing, D.
Deposit date:2023-02-08
Release date:2024-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:PURA syndrome-causing mutations impair PUR-domain integrity and affect P-body association.
Elife, 13, 2024
8CHW
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BU of 8chw by Molmil
Crystal structure of human PURA (fragment Pro216-Lys280, PUR repeat III)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Transcriptional activator protein Pur-alpha
Authors:Janowski, R, Niessing, D.
Deposit date:2023-02-08
Release date:2024-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:PURA syndrome-causing mutations impair PUR-domain integrity and affect P-body association.
Elife, 13, 2024
8CHT
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BU of 8cht by Molmil
Crystal structure of human PURA (fragment Glu57-Glu212, PUR repeat I and II)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Transcriptional activator protein Pur-alpha
Authors:Janowski, R, Niessing, D.
Deposit date:2023-02-08
Release date:2024-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:PURA syndrome-causing mutations impair PUR-domain integrity and affect P-body association.
Elife, 13, 2024
8CHV
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BU of 8chv by Molmil
Crystal structure of human PURA (fragment Glu57-Glu212, PUR repeat I and II) R140P mutant
Descriptor: Transcriptional activator protein Pur-alpha
Authors:Janowski, R, Niessing, D.
Deposit date:2023-02-08
Release date:2024-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:PURA syndrome-causing mutations impair PUR-domain integrity and affect P-body association.
Elife, 13, 2024
3K44
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BU of 3k44 by Molmil
Crystal Structure of Drosophila melanogaster Pur-alpha
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Purine-rich binding protein-alpha, ...
Authors:Graebsch, A, Roche, S, Niessing, D.
Deposit date:2009-10-05
Release date:2009-10-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of Pur-alpha reveals a Whirly-like fold and an unusual nucleic-acid binding surface
Proc.Natl.Acad.Sci.USA, 106, 2009
4E61
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BU of 4e61 by Molmil
Crystal structure of the EB1-like motif of Bim1p
Descriptor: Protein BIM1
Authors:Huels, D, Storchova, Z, Niessing, D.
Deposit date:2012-03-15
Release date:2012-04-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Post-translational Modifications Regulate Assembly of Early Spindle Orientation Complex in Yeast.
J.Biol.Chem., 287, 2012
5M0I
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BU of 5m0i by Molmil
Crystal structure of the nuclear complex with She2p and the ASH1 mRNA E3-localization element
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ASH1-E3 element, ...
Authors:Edelmann, F.T, Janowski, R, Niessing, D.
Deposit date:2016-10-05
Release date:2017-01-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Molecular architecture and dynamics of ASH1 mRNA recognition by its mRNA-transport complex.
Nat. Struct. Mol. Biol., 24, 2017
5M0J
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BU of 5m0j by Molmil
Crystal structure of the cytoplasmic complex with She2p, She3p, and the ASH1 mRNA E3-localization element
Descriptor: ASH1 E3 (28 nt-loop), MAGNESIUM ION, SWI5-dependent HO expression protein 2,SWI5-dependent HO expression protein 3
Authors:Edelmann, F.T, Janowski, R, Niessing, D.
Deposit date:2016-10-05
Release date:2017-01-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular architecture and dynamics of ASH1 mRNA recognition by its mRNA-transport complex.
Nat. Struct. Mol. Biol., 24, 2017
6TQA
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BU of 6tqa by Molmil
X-ray structure of Roquin ROQ domain in complex with a UCP3 CDE2 SL RNA motif
Descriptor: CHLORIDE ION, MAGNESIUM ION, RNA (5'-R(P*GP*GP*UP*GP*CP*CP*UP*AP*AP*UP*AP*UP*UP*UP*AP*GP*GP*CP*AP*CP*(CCC))-3'), ...
Authors:Binas, O, Tants, J.-N, Peter, S.A, Janowski, R, Davydova, E, Braun, J, Niessing, D, Schwalbe, H, Weigand, J.E, Schlundt, A.
Deposit date:2019-12-16
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the recognition of transiently structured AU-rich elements by Roquin.
Nucleic Acids Res., 48, 2020
6TQB
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BU of 6tqb by Molmil
X-ray structure of Roquin ROQ domain in complex with a UCP3 CDE1 SL RNA motif
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Binas, O, Tants, J.-N, Peter, S.A, Janowski, R, Davydova, E, Braun, J, Niessing, D, Schwalbe, H, Weigand, J.E, Schlundt, A.
Deposit date:2019-12-16
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for the recognition of transiently structured AU-rich elements by Roquin.
Nucleic Acids Res., 48, 2020
3NM7
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BU of 3nm7 by Molmil
Crystal Structure of Borrelia burgdorferi Pur-alpha
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Uncharacterized protein
Authors:Graebsch, A, Roche, S, Kostrewa, D, Niessing, D.
Deposit date:2010-06-22
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Of Bits and Bugs - on the use of bioinformatics and a bacterial crystal structure to solve a eukaryotic repeat-protein structure.
Plos One, 5, 2010
3N8B
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BU of 3n8b by Molmil
Crystal Structure of Borrelia burgdorferi Pur-alpha
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Uncharacterized protein
Authors:Graebsch, A, Roche, S, Kostrewa, D, Niessing, D.
Deposit date:2010-05-28
Release date:2010-10-06
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Of bits and bugs--on the use of bioinformatics and a bacterial crystal structure to solve a eukaryotic repeat-protein structure.
Plos One, 5, 2010
5JU7
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BU of 5ju7 by Molmil
DNA BINDING DOMAIN OF E.COLI CADC
Descriptor: Transcriptional activator CadC, ZINC ION
Authors:Janowski, R, Schlundt, A, Sattler, M, Niessing, D.
Deposit date:2016-05-10
Release date:2017-04-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure-function analysis of the DNA-binding domain of a transmembrane transcriptional activator.
Sci Rep, 7, 2017
5L71
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BU of 5l71 by Molmil
Crystal structure of mouse phospholipid hydroperoxide glutathione peroxidase 4 (GPx4)
Descriptor: 1,2-ETHANEDIOL, Phospholipid hydroperoxide glutathione peroxidase, mitochondrial
Authors:Janowski, R, Scanu, S, Madl, T, Niessing, D.
Deposit date:2016-06-01
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal and solution structural studies of mouse phospholipid hydroperoxide glutathione peroxidase 4.
Acta Crystallogr.,Sect.F, 72, 2016
7A2B
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BU of 7a2b by Molmil
X-ray structure of Lactobacillus brevis alcohol dehydrogenase mutant Q207D
Descriptor: MAGNESIUM ION, R-specific alcohol dehydrogenase
Authors:Bischoff, D, Hermann, J, Janowski, R, Niessing, D, Grob, P, Hekmat, D, Weuster-Botz, D.
Deposit date:2020-08-17
Release date:2020-10-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Controlling Protein Crystallization by Free Energy Guided Design of Interactions at Crystal Contacts
Crystals, 11, 2021
5M0H
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BU of 5m0h by Molmil
Crystal structure of the central flexible region of ASH1 mRNA E3-localization element
Descriptor: ASH1 E3 (42 nt-TL/TLR), SULFATE ION
Authors:Edelmann, F.T, Janowski, R, Niessing, D.
Deposit date:2016-10-05
Release date:2017-01-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Molecular architecture and dynamics of ASH1 mRNA recognition by its mRNA-transport complex.
Nat. Struct. Mol. Biol., 24, 2017

 

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