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PDB: 119 results

2EXJ
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BU of 2exj by Molmil
Structure of the family43 beta-Xylosidase D128G mutant from geobacillus stearothermophilus in complex with xylobiose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Brux, C, Niefind, K, Shallom-Shezifi, D, Shoham, Y, Schomburg, D.
Deposit date:2005-11-08
Release date:2006-04-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structure of an Inverting GH43 beta-Xylosidase from Geobacillus stearothermophilus with its Substrate Reveals the Role of the Three Catalytic Residues.
J.Mol.Biol., 359, 2006
3N2T
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BU of 3n2t by Molmil
Structure of the glycerol dehydrogenase AKR11B4 from Gluconobacter oxydans
Descriptor: Putative oxidoreductase
Authors:Richter, N, Breicha, K, Hummel, W, Niefind, K.
Deposit date:2010-05-19
Release date:2010-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Three-Dimensional Structure of AKR11B4, a Glycerol Dehydrogenase from Gluconobacter oxydans, Reveals a Tryptophan Residue as an Accelerator of Reaction Turnover.
J.Mol.Biol., 404, 2010
1GKQ
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D-Hydantoinase (Dihydropyrimidinase) from Thermus sp. in space group P212121
Descriptor: HYDANTOINASE, ZINC ION
Authors:Abendroth, J, Niefind, K, Schomburg, D.
Deposit date:2001-08-20
Release date:2002-06-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:X-Ray Structure of a Dihydropyrimidinase from Thermus Sp. At 1.3 A Resolution
J.Mol.Biol., 320, 2002
1PJK
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Crystal Structure of a C-terminal deletion mutant of human protein kinase CK2 catalytic subunit
Descriptor: CHLORIDE ION, Casein kinase II, alpha chain, ...
Authors:Ermakova, I, Boldyreff, B, Issinger, O.-G, Niefind, K.
Deposit date:2003-06-03
Release date:2003-06-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a C-terminal deletion mutant of human protein kinase CK2 catalytic subunit
J.Mol.Biol., 330, 2003
4RLL
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BU of 4rll by Molmil
Crystal structure of human CK2alpha in complex with the ATP-competitive inhibitor 4-[(E)-(fluoren-9-ylidenehydrazinylidene)-methyl] benzoate
Descriptor: 4-[(E)-(9H-fluoren-9-ylidenehydrazinylidene)methyl]benzoic acid, Casein kinase II subunit alpha, GLYCEROL
Authors:Guerra, B, Rasmussen, T.D.L, Schnitzler, A, Jensen, H.H, Boldyreff, B.S, Miyata, Y, Marcussen, N, Niefind, K, Issinger, O.G.
Deposit date:2014-10-17
Release date:2014-12-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Protein kinase CK2 inhibition is associated with the destabilization of HIF-1 alpha in human cancer cells.
Cancer Lett, 356, 2015
4RLK
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Crystal structure of Z. mays CK2alpha in complex with the ATP-competitive inhibitor 4-[(E)-(fluoren-9-ylidenehydrazinylidene)-methyl] benzoate
Descriptor: 4-[(E)-(9H-fluoren-9-ylidenehydrazinylidene)methyl]benzoic acid, ACETATE ION, Casein kinase II subunit alpha, ...
Authors:Guerra, B, Rasmussen, T.D.L, Schnitzler, A, Jensen, H.H, Boldyreff, B.S, Miyata, Y, Marcussen, N, Niefind, K, Issinger, O.G.
Deposit date:2014-10-17
Release date:2014-12-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Protein kinase CK2 inhibition is associated with the destabilization of HIF-1 alpha in human cancer cells.
Cancer Lett, 356, 2015
1K1D
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BU of 1k1d by Molmil
Crystal structure of D-hydantoinase
Descriptor: D-hydantoinase, ZINC ION
Authors:Cheon, Y.H, Kim, H.S, Han, K.H, Abendroth, J, Niefind, K, Schomburg, D, Wang, J, Kim, Y.
Deposit date:2001-09-25
Release date:2002-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal structure of D-hydantoinase from Bacillus stearothermophilus: insight into the stereochemistry of enantioselectivity.
Biochemistry, 41, 2002
1PZ3
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BU of 1pz3 by Molmil
Crystal structure of a family 51 (GH51) alpha-L-arabinofuranosidase from Geobacillus stearothermophilus T6
Descriptor: Alpha-L-arabinofuranosidase, GLYCEROL
Authors:Hoevel, K, Shallom, D, Niefind, K, Belakhov, V, Shoham, G, Baasov, T, Shoham, Y, Schomburg, D.
Deposit date:2003-07-09
Release date:2003-10-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure and snapshots along the reaction pathway of a family 51 alpha-L-arabinofuranosidase
Embo J., 22, 2003
1PZ2
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Crystal structure of a transient covalent reaction intermediate of a family 51 alpha-L-arabinofuranosidase
Descriptor: Alpha-L-arabinofuranosidase, alpha-L-arabinofuranose
Authors:Hoevel, K, Shallom, D, Niefind, K, Belakhov, V, Shoham, G, Baasov, T, Shoham, Y, Schomburg, D.
Deposit date:2003-07-09
Release date:2003-10-07
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and snapshots along the reaction pathway of a family 51 alpha-L-arabinofuranosidase
Embo J., 22, 2003
1QW9
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Crystal structure of a family 51 alpha-L-arabinofuranosidase in complex with 4-nitrophenyl-Ara
Descriptor: 4-nitrophenyl alpha-L-arabinofuranoside, Alpha-L-arabinofuranosidase
Authors:Hoevel, K, Shallom, D, Niefind, K, Belakhov, V, Shoham, G, Bassov, T, Shoham, Y, Schomburg, D.
Deposit date:2003-09-01
Release date:2003-10-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure and snapshots along the reaction pathway of a family 51 alpha-L-arabinofuranosidase
Embo J., 22, 2003
1QW8
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Crystal structure of a family 51 alpha-L-arabinofuranosidase in complex with Ara-alpha(1,3)-Xyl
Descriptor: Alpha-L-arabinofuranosidase, alpha-L-arabinofuranose-(1-3)-beta-D-xylopyranose
Authors:Hoevel, K, Shallom, D, Niefind, K, Belakhov, V, Shoham, G, Bassov, T, Shoham, Y, Schomburg, D.
Deposit date:2003-09-01
Release date:2003-10-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and snapshots along the reaction pathway of a family 51 alpha-L-arabinofuranosidase
Embo J., 22, 2003
3Q76
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BU of 3q76 by Molmil
Structure of human neutrophil elastase (uncomplexed)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Neutrophil elastase, ...
Authors:Hansen, G, Niefind, K.
Deposit date:2011-01-04
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.861 Å)
Cite:Unexpected active-site flexibility in the structure of human neutrophil elastase in complex with a new dihydropyrimidone inhibitor.
J.Mol.Biol., 409, 2011
2NLO
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BU of 2nlo by Molmil
Crystal Structure of the Quinate Dehydrogenase from Corynebacterium glutamicum
Descriptor: GLYCEROL, Shikimate dehydrogenase
Authors:Schoepe, J, Niefind, K, Schomburg, D.
Deposit date:2006-10-20
Release date:2006-11-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.643 Å)
Cite:1.6 A structure of an NAD(+)-dependent quinate dehydrogenase from Corynebacterium glutamicum
Acta Crystallogr.,Sect.D, 64, 2008
3JYP
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Quinate dehydrogenase from Corynebacterium glutamicum in complex with quinate and NADH
Descriptor: (1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Quinate/shikimate dehydrogenase
Authors:Hoeppner, A, Schomburg, D, Niefind, K.
Deposit date:2009-09-22
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Enzyme-substrate complexes of the quinate/shikimate dehydrogenase from Corynebacterium glutamicum enable new insights in substrate and cofactor binding, specificity, and discrimination.
Biol.Chem., 394, 2013
3JYO
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BU of 3jyo by Molmil
Quinate dehydrogenase from Corynebacterium glutamicum in complex with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Quinate/shikimate dehydrogenase
Authors:Hoeppner, A, Niefind, K, Schomburg, D.
Deposit date:2009-09-22
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1 Å)
Cite:Enzyme-substrate complexes of the quinate/shikimate dehydrogenase from Corynebacterium glutamicum enable new insights in substrate and cofactor binding, specificity, and discrimination.
Biol.Chem., 394, 2013
3JYQ
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BU of 3jyq by Molmil
Quinate dehydrogenase from Corynebacterium glutamicum in complex with shikimate and NADH
Descriptor: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Quinate/shikimate dehydrogenase
Authors:Hoeppner, A, Schomburg, D, Niefind, K.
Deposit date:2009-09-22
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Enzyme-substrate complexes of the quinate/shikimate dehydrogenase from Corynebacterium glutamicum enable new insights in substrate and cofactor binding, specificity, and discrimination.
Biol.Chem., 394, 2013
1Q3K
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Crystal structure of creatinine amidohydrolase (creatininase)
Descriptor: GLYCEROL, ZINC ION, creatininase
Authors:Beuth, B, Niefind, K, Schomburg, D.
Deposit date:2003-07-30
Release date:2003-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of creatininase from Pseudomonas putida: A novel fold and a case of convergent evolution
J.Mol.Biol., 332, 2003
3Q77
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Structure of human neutrophil elastase in complex with a dihydropyrimidone inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxyethyl (4R)-4-(4-cyanophenyl)-6-methyl-2-oxo-1-[3-(trifluoromethyl)phenyl]-1,2,3,4-tetrahydropyrimidine-5-carboxylate, ...
Authors:Hansen, G, Niefind, K.
Deposit date:2011-01-04
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Unexpected active-site flexibility in the structure of human neutrophil elastase in complex with a new dihydropyrimidone inhibitor.
J.Mol.Biol., 409, 2011
5OMY
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BU of 5omy by Molmil
HIGH-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR 4P
Descriptor: 4-(3-methylbut-2-enoxy)-5-propan-2-yl-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione, CHLORIDE ION, Casein kinase II subunit alpha
Authors:Hochscherf, J, Lindenblatt, D, Witulski, B, Birus, R, Aichele, D, Marminon, C, Bouaziz, Z, Le Borgne, M, Jose, J, Niefind, K.
Deposit date:2017-08-02
Release date:2017-12-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Unexpected Binding Mode of a Potent Indeno[1,2-b]indole-Type Inhibitor of Protein Kinase CK2 Revealed by Complex Structures with the Catalytic Subunit CK2 alpha and Its Paralog CK2 alpha '.
Pharmaceuticals (Basel), 10, 2017

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