Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 16788 results

1C8I
DownloadVisualize
BU of 1c8i by Molmil
BINDING MODE OF HYDROXYLAMINE TO ARTHROMYCES RAMOSUS PEROXIDASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HYDROXYAMINE, ...
Authors:Wariishi, H, Nonaka, D, Johjima, T, Nakamura, N, Naruta, Y, Kubo, K, Fukuyama, K.
Deposit date:2000-05-08
Release date:2001-01-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Direct binding of hydroxylamine to the heme iron of Arthromyces ramosus peroxidase. Substrate analogue that inhibits compound I formation in a competetive manner.
J.Biol.Chem., 275, 2000
1BXE
DownloadVisualize
BU of 1bxe by Molmil
RIBOSOMAL PROTEIN L22 FROM THERMUS THERMOPHILUS
Descriptor: CHLORIDE ION, PROTEIN (RIBOSOMAL PROTEIN L22)
Authors:Unge, J, Aberg, A, Al-Karadaghi, S, Nikulin, A, Nikonov, S, Davydova, N, Nevskaya, N, Garber, M, Liljas, A.
Deposit date:1998-10-02
Release date:1998-10-07
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of ribosomal protein L22 from Thermus thermophilus: insights into the mechanism of erythromycin resistance.
Structure, 6, 1998
1C51
DownloadVisualize
BU of 1c51 by Molmil
PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY
Descriptor: CHLOROPHYLL A, IRON/SULFUR CLUSTER, PHYLLOQUINONE, ...
Authors:Klukas, O, Schubert, W.D, Jordan, P, Krauss, N, Fromme, P, Witt, H.T, Saenger, W.
Deposit date:1999-10-21
Release date:2000-03-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (4 Å)
Cite:Photosystem I, an improved model of the stromal subunits PsaC, PsaD, and PsaE.
J.Biol.Chem., 274, 1999
1AQM
DownloadVisualize
BU of 1aqm by Molmil
ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS COMPLEXED WITH TRIS
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ALPHA-AMYLASE, CALCIUM ION, ...
Authors:Aghajari, N, Haser, R.
Deposit date:1997-07-31
Release date:1999-03-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of the psychrophilic alpha-amylase from Alteromonas haloplanctis in its native form and complexed with an inhibitor.
Protein Sci., 7, 1998
1AQH
DownloadVisualize
BU of 1aqh by Molmil
ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS
Descriptor: ALPHA-AMYLASE, CALCIUM ION, CHLORIDE ION
Authors:Aghajari, N, Haser, R.
Deposit date:1997-07-30
Release date:1999-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the psychrophilic alpha-amylase from Alteromonas haloplanctis in its native form and complexed with an inhibitor.
Protein Sci., 7, 1998
1ARP
DownloadVisualize
BU of 1arp by Molmil
Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1.9 angstroms resolution: structural comparisons with the lignin and cytochrome C peroxidases
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, PEROXIDASE, ...
Authors:Kunishima, N, Fukuyama, K.
Deposit date:1993-06-18
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1.9 A resolution. Structural comparisons with the lignin and cytochrome c peroxidases.
J.Mol.Biol., 235, 1994
1AD2
DownloadVisualize
BU of 1ad2 by Molmil
RIBOSOMAL PROTEIN L1 MUTANT WITH SERINE 179 REPLACED BY CYSTEINE
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, MERCURY (II) ION, RIBOSOMAL PROTEIN L1, ...
Authors:Unge, J, Al-Karadaghi, S, Liljas, A, Jonsson, B.-H, Eliseikina, I, Ossina, N, Nevskaya, N, Fomenkova, N, Garber, M, Nikonov, S.
Deposit date:1997-02-20
Release date:1997-05-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A mutant form of the ribosomal protein L1 reveals conformational flexibility.
FEBS Lett., 411, 1997
1BVD
DownloadVisualize
BU of 1bvd by Molmil
STRUCTURE OF A BILIVERDIN APOMYOGLOBIN COMPLEX (FORM B) AT 98 K
Descriptor: APOMYOGLOBIN, BILIVERDINE IX ALPHA
Authors:Wagner, U.G, Mueller, N, Schmitzberger, W, Falk, H, Kratky, C.
Deposit date:1994-12-16
Release date:1995-07-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure determination of the biliverdin apomyoglobin complex: crystal structure analysis of two crystal forms at 1.4 and 1.5 A resolution.
J.Mol.Biol., 247, 1995
1BX6
DownloadVisualize
BU of 1bx6 by Molmil
CRYSTAL STRUCTURE OF THE POTENT NATURAL PRODUCT INHIBITOR BALANOL IN COMPLEX WITH THE CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE
Descriptor: BALANOL, CAMP-DEPENDENT PROTEIN KINASE
Authors:Narayana, N, Xuong, N.-H, Ten Eyck, L.F, Taylor, S.S.
Deposit date:1998-10-13
Release date:1999-04-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the potent natural product inhibitor balanol in complex with the catalytic subunit of cAMP-dependent protein kinase.
Biochemistry, 38, 1999
1BVC
DownloadVisualize
BU of 1bvc by Molmil
STRUCTURE OF A BILIVERDIN APOMYOGLOBIN COMPLEX (FORM D) AT 118 K
Descriptor: APOMYOGLOBIN, BILIVERDINE IX ALPHA, PHOSPHATE ION
Authors:Wagner, U.G, Mueller, N, Schmitzberger, W, Falk, H, Kratky, C.
Deposit date:1994-12-16
Release date:1995-07-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure determination of the biliverdin apomyoglobin complex: crystal structure analysis of two crystal forms at 1.4 and 1.5 A resolution.
J.Mol.Biol., 247, 1995
1BOZ
DownloadVisualize
BU of 1boz by Molmil
STRUCTURE-BASED DESIGN AND SYNTHESIS OF LIPOPHILIC 2,4-DIAMINO-6-SUBSTITUTED QUINAZOLINES AND THEIR EVALUATION AS INHIBITORS OF DIHYDROFOLATE REDUCTASE AND POTENTIAL ANTITUMOR AGENTS
Descriptor: N6-(2,5-DIMETHOXY-BENZYL)-N6-METHYL-PYRIDO[2,3-D]PYRIMIDINE-2,4,6-TRIAMINE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTEIN (DIHYDROFOLATE REDUCTASE)
Authors:Gangjee, A, Vidwans, A.P, Vasudevan, A, Queener, S.F, Kisliuk, R.L, Cody, V, Li, R, Galitsky, N, Luft, J.R, Pangborn, W.
Deposit date:1998-08-06
Release date:1998-08-12
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based design and synthesis of lipophilic 2,4-diamino-6-substituted quinazolines and their evaluation as inhibitors of dihydrofolate reductases and potential antitumor agents.
J.Med.Chem., 41, 1998
1CD2
DownloadVisualize
BU of 1cd2 by Molmil
LIGAND INDUCED CONFORMATIONAL CHANGES IN THE CRYSTAL STRUCTURES OF PNEUMOCYSTIS CARINII DIHYDROFOLATE REDUCTASE COMPLEXES WITH FOLATE AND NADP+
Descriptor: DIHYDROFOLATE REDUCTASE, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cody, V, Galitsky, N, Luft, J.R, Pangborn, W, Blakley, R.L, Gangjee, A.
Deposit date:1999-03-05
Release date:2000-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ligand-induced conformational changes in the crystal structures of Pneumocystis carinii dihydrofolate reductase complexes with folate and NADP+.
Biochemistry, 38, 1999
1AF3
DownloadVisualize
BU of 1af3 by Molmil
RAT BCL-XL AN APOPTOSIS INHIBITORY PROTEIN
Descriptor: APOPTOSIS REGULATOR BCL-X
Authors:Aritomi, M, Kunishima, N, Inohara, N, Ishibashi, Y, Ohta, S, Morikawa, K.
Deposit date:1997-03-21
Release date:1997-07-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of rat Bcl-xL. Implications for the function of the Bcl-2 protein family.
J.Biol.Chem., 272, 1997
1A7V
DownloadVisualize
BU of 1a7v by Molmil
CYTOCHROME C' FROM RHODOPSEUDOMONAS PALUSTRIS
Descriptor: CYTOCHROME C', PROTOPORPHYRIN IX CONTAINING FE
Authors:Shibata, N, Iba, S, Misaki, S, Meyer, T.E, Bartsch, R.G, Cusanovich, M.A, Higuchi, Y, Yasuoka, N.
Deposit date:1998-03-18
Release date:1998-06-17
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Basis for monomer stabilization in Rhodopseudomonas palustris cytochrome c' derived from the crystal structure.
J.Mol.Biol., 284, 1998
1B1Y
DownloadVisualize
BU of 1b1y by Molmil
SEVENFOLD MUTANT OF BARLEY BETA-AMYLASE
Descriptor: PROTEIN (BETA-AMYLASE), alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose
Authors:Mikami, B, Yoon, H.J, Yoshigi, N.
Deposit date:1998-11-25
Release date:1998-12-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the sevenfold mutant of barley beta-amylase with increased thermostability at 2.5 A resolution.
J.Mol.Biol., 285, 1999
1BH6
DownloadVisualize
BU of 1bh6 by Molmil
SUBTILISIN DY IN COMPLEX WITH THE SYNTHETIC INHIBITOR N-BENZYLOXYCARBONYL-ALA-PRO-PHE-CHLOROMETHYL KETONE
Descriptor: CALCIUM ION, N-BENZYLOXYCARBONYL-ALA-PRO-3-AMINO-4-PHENYL-BUTAN-2-OL, SODIUM ION, ...
Authors:Eschenburg, S, Genov, N, Wilson, K.S, Betzel, C.
Deposit date:1998-06-15
Release date:1998-11-04
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of subtilisin DY, a random mutant of subtilisin Carlsberg.
Eur.J.Biochem., 257, 1998
1AZE
DownloadVisualize
BU of 1aze by Molmil
NMR STRUCTURE OF THE COMPLEX BETWEEN THE C32S-Y7V MUTANT OF THE NSH3 DOMAIN OF GRB2 WITH A PEPTIDE FROM SOS, 10 STRUCTURES
Descriptor: GRB2, SOS
Authors:Vidal, M, Gincel, E, Goudreau, N, Cornille, F, Parker, F, Duchesne, M, Tocque, B, Garbay, C, Roques, B.P.
Deposit date:1997-11-17
Release date:1999-05-18
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Molecular and cellular analysis of Grb2 SH3 domain mutants: interaction with Sos and dynamin.
J.Mol.Biol., 290, 1999
1C04
DownloadVisualize
BU of 1c04 by Molmil
IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI
Descriptor: 23S RRNA FRAGMENT, RIBOSOMAL PROTEIN L11, RIBOSOMAL PROTEIN L14, ...
Authors:Ban, N, Nissen, P, Capel, M, Moore, P.B, Steitz, T.A.
Deposit date:1999-07-14
Release date:1999-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (5 Å)
Cite:Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
Nature, 400, 1999
1BQR
DownloadVisualize
BU of 1bqr by Molmil
REDUCED PSEUDOAZURIN
Descriptor: COPPER (II) ION, PSEUDOAZURIN
Authors:Inoue, T, Nishio, N, Hamanaka, S, Shimomura, T, Harada, S, Suzuki, S, Kohzuma, T, Shidara, S, Iwasaki, H, Kai, Y.
Deposit date:1998-08-17
Release date:1999-08-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure determinations of oxidized and reduced pseudoazurins from Achromobacter cycloclastes. Concerted movement of copper site in redox forms with the rearrangement of hydrogen bond at a remote histidine.
J.Biol.Chem., 274, 1999
1C0N
DownloadVisualize
BU of 1c0n by Molmil
CSDB PROTEIN, NIFS HOMOLOGUE
Descriptor: ACETIC ACID, PROTEIN (CSDB PROTEIN), PYRIDOXAL-5'-PHOSPHATE
Authors:Fujii, T, Maeda, M, Mihara, H, Kurihara, T, Esaki, N, Hata, Y.
Deposit date:1999-07-17
Release date:2000-07-17
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a NifS homologue: X-ray structure analysis of CsdB, an Escherichia coli counterpart of mammalian selenocysteine lyase
Biochemistry, 39, 2000
1BQK
DownloadVisualize
BU of 1bqk by Molmil
OXIDIZED PSEUDOAZURIN
Descriptor: COPPER (II) ION, PSEUDOAZURIN
Authors:Inoue, T, Nishio, N, Hamanaka, S, Shimomura, T, Harada, S, Suzuki, S, Kohzuma, T, Shidara, S, Iwasaki, H, Kai, Y.
Deposit date:1998-08-17
Release date:1999-08-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure determinations of oxidized and reduced pseudoazurins from Achromobacter cycloclastes. Concerted movement of copper site in redox forms with the rearrangement of hydrogen bond at a remote histidine.
J.Biol.Chem., 274, 1999
1C1Y
DownloadVisualize
BU of 1c1y by Molmil
CRYSTAL STRUCTURE OF RAP.GMPPNP IN COMPLEX WITH THE RAS-BINDING-DOMAIN OF C-RAF1 KINASE (RAFRBD).
Descriptor: CALCIUM ION, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Nassar, N.
Deposit date:1999-07-22
Release date:1999-08-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The 2.2 A crystal structure of the Ras-binding domain of the serine/threonine kinase c-Raf1 in complex with Rap1A and a GTP analogue.
Nature, 375, 1995
1AIF
DownloadVisualize
BU of 1aif by Molmil
ANTI-IDIOTYPIC FAB 409.5.3 (IGG2A) FAB FROM MOUSE
Descriptor: ANTI-IDIOTYPIC FAB 409.5.3 (IGG2A) FAB (HEAVY CHAIN), ANTI-IDIOTYPIC FAB 409.5.3 (IGG2A) FAB (LIGHT CHAIN)
Authors:Ban, N, Escobar, C, Hasel, K, Day, J, Greenwood, A, McPherson, A.
Deposit date:1994-11-14
Release date:1997-02-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of an anti-idiotypic Fab against feline peritonitis virus-neutralizing antibody and a comparison with the complexed Fab.
FASEB J., 9, 1995
1ARX
DownloadVisualize
BU of 1arx by Molmil
CRYSTAL STRUCTURES OF CYANIDE-AND TRIIODIDE-BOUND FORMS OF ARTHROMYCES RAMOSUS PEROXIDASE AT DIFFERENT PH VALUES. PERTURBATIONS OF ACTIVE SITE RESIDUES AND THEIR IMPLICATION IN ENZYME CATALYSIS
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, IODIDE ION, ...
Authors:Fukuyama, K, Kunishima, N, Amada, F.
Deposit date:1995-04-25
Release date:1996-01-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of cyanide- and triiodide-bound forms of Arthromyces ramosus peroxidase at different pH values. Perturbations of active site residues and their implication in enzyme catalysis.
J.Biol.Chem., 270, 1995
1ARY
DownloadVisualize
BU of 1ary by Molmil
CRYSTAL STRUCTURES OF CYANIDE-AND TRIIODIDE-BOUND FORMS OF ARTHROMYCES RAMOSUS PEROXIDASE AT DIFFERENT PH VALUES. PERTURBATIONS OF ACTIVE SITE RESIDUES AND THEIR IMPLICATION IN ENZYME CATALYSIS
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, IODIDE ION, ...
Authors:Fukuyama, K, Kunishima, N, Amada, F.
Deposit date:1995-04-25
Release date:1996-01-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of cyanide- and triiodide-bound forms of Arthromyces ramosus peroxidase at different pH values. Perturbations of active site residues and their implication in enzyme catalysis.
J.Biol.Chem., 270, 1995

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon