Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 76 results

1XZ3
DownloadVisualize
BU of 1xz3 by Molmil
Complex of apoferritin with isoflurane
Descriptor: 1-CHLORO-2,2,2-TRIFLUOROETHYL DIFLUOROMETHYL ETHER, CADMIUM ION, Ferritin light chain
Authors:Liu, R, Loll, P.J, Eckenhoff, R.G.
Deposit date:2004-11-11
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for high-affinity volatile anesthetic binding in a natural 4-helix bundle protein.
Faseb J., 19, 2005
1XZ1
DownloadVisualize
BU of 1xz1 by Molmil
Complex of halothane with apoferritin
Descriptor: 2-BROMO-2-CHLORO-1,1,1-TRIFLUOROETHANE, CADMIUM ION, Ferritin light chain
Authors:Liu, R, Loll, P.J, Eckenhoff, R.G.
Deposit date:2004-11-11
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for high-affinity volatile anesthetic binding in a natural 4-helix bundle protein.
Faseb J., 19, 2005
3PZ0
DownloadVisualize
BU of 3pz0 by Molmil
The crystal structure of AaLeuRS-CP1
Descriptor: CALCIUM ION, Leucyl-tRNA synthetase subunit alpha
Authors:Liu, R.J, Wang, E.D.
Deposit date:2010-12-13
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Peripheral insertion modulates the editing activity of the isolated CP1 domain of leucyl-tRNA synthetase
Biochem.J., 440, 2011
4XBO
DownloadVisualize
BU of 4xbo by Molmil
Crystal structure of full length E.coli TrmJ in complex with SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
Authors:Liu, R.J, Long, T, Zhou, M, Wang, E.D.
Deposit date:2014-12-17
Release date:2015-12-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:tRNA recognition by a bacterial tRNA Xm32 modification enzyme from the SPOUT methyltransferase superfamily
Nucleic Acids Res., 43, 2015
7BZJ
DownloadVisualize
BU of 7bzj by Molmil
The Discovery of Benzhydrol-Oxaborole Hybrid Derivatives as Leucyl-tRNA Synthetase Inhibitors
Descriptor: Leucine--tRNA ligase, [(1~{R},5~{R},6~{S},8~{R})-8-(6-aminopurin-9-yl)-4'-[(~{R})-oxidanyl-[4-(2-oxidanylidenepropylsulfanyl)phenyl]methyl]spiro[2,4,7-trioxa-3-boranuidabicyclo[3.3.0]octane-3,7'-7-boranuidabicyclo[4.3.0]nona-1(6),2,4-triene]-6-yl]methoxy-tris(oxidanyl)phosphanium
Authors:Liu, R.J, Li, H, Wang, E.D, Zhou, H.
Deposit date:2020-04-28
Release date:2020-12-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of benzhydrol-oxaborole derivatives as Streptococcus pneumoniae leucyl-tRNA synthetase inhibitors.
Bioorg.Med.Chem., 29, 2021
3PZ5
DownloadVisualize
BU of 3pz5 by Molmil
The crystal structure of AaLeuRS-CP1-D20
Descriptor: Leucyl-tRNA synthetase subunit alpha
Authors:Liu, R.J, Wang, E.D.
Deposit date:2010-12-14
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Peripheral insertion modulates the editing activity of the isolated CP1 domain of leucyl-tRNA synthetase
Biochem.J., 440, 2011
4JAK
DownloadVisualize
BU of 4jak by Molmil
Crystal structure of tRNA (Um34/Cm34) methyltransferase TrmL from Escherichia coli
Descriptor: tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Liu, R.J, Zhou, M, Wang, E.D.
Deposit date:2013-02-18
Release date:2013-07-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The tRNA recognition mechanism of the minimalist SPOUT methyltransferase, TrmL
Nucleic Acids Res., 41, 2013
4JAL
DownloadVisualize
BU of 4jal by Molmil
Crystal structure of tRNA (Um34/Cm34) methyltransferase TrmL from Escherichia coli with SAH
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Liu, R.J, Zhou, M, Wang, E.D.
Deposit date:2013-02-18
Release date:2013-07-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The tRNA recognition mechanism of the minimalist SPOUT methyltransferase, TrmL
Nucleic Acids Res., 41, 2013
1QS9
DownloadVisualize
BU of 1qs9 by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-25
Release date:1999-07-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QTD
DownloadVisualize
BU of 1qtd by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-27
Release date:1999-07-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QS5
DownloadVisualize
BU of 1qs5 by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-25
Release date:1999-07-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QSB
DownloadVisualize
BU of 1qsb by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, PROTEIN (LYSOZYME)
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-20
Release date:1999-07-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QTH
DownloadVisualize
BU of 1qth by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-28
Release date:1999-07-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QTC
DownloadVisualize
BU of 1qtc by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-26
Release date:1999-07-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QTB
DownloadVisualize
BU of 1qtb by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-26
Release date:1999-07-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
7VSQ
DownloadVisualize
BU of 7vsq by Molmil
Crystal strcuture of the tandem B-Box domains of CONSTANS
Descriptor: ZINC ION, Zinc finger protein CONSTANS
Authors:Liu, R, Lv, X, Du, J.
Deposit date:2021-10-27
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of CONSTANS oligomerization in FLOWERING LOCUS T activation.
J Integr Plant Biol, 64, 2022
3U90
DownloadVisualize
BU of 3u90 by Molmil
apoferritin: complex with SDS
Descriptor: CADMIUM ION, DODECYL SULFATE, Ferritin light chain
Authors:Liu, R, Bu, W, Xi, J, Mortazavi, S.R, Cheung-Lau, J.C, Dmochowski, I.J, Loll, P.J.
Deposit date:2011-10-17
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Beyond the detergent effect: a binding site for sodium dodecyl sulfate (SDS) in mammalian apoferritin.
Acta Crystallogr.,Sect.D, 68, 2012
3NDP
DownloadVisualize
BU of 3ndp by Molmil
Crystal structure of human AK4(L171P)
Descriptor: Adenylate kinase isoenzyme 4, SULFATE ION
Authors:Liu, R, Wang, Y, Wei, Z, Gong, W.
Deposit date:2010-06-07
Release date:2010-06-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human adenylate kinase 4 (L171P) suggests the role of hinge region in protein domain motion
Biochem.Biophys.Res.Commun., 379, 2009
3PZ6
DownloadVisualize
BU of 3pz6 by Molmil
The crystal structure of GlLeuRS-CP1
Descriptor: Leucyl-tRNA synthetase
Authors:Liu, R.J, Du, D.H, Wang, E.D.
Deposit date:2010-12-14
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Peripheral insertion modulates the editing activity of the isolated CP1 domain of leucyl-tRNA synthetase
Biochem.J., 440, 2011
5WWR
DownloadVisualize
BU of 5wwr by Molmil
Crystal structure of human NSun6/tRNA/SFG
Descriptor: Putative methyltransferase NSUN6, SINEFUNGIN, tRNA
Authors:Liu, R.J, Long, T, Wang, E.D.
Deposit date:2017-01-04
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.096 Å)
Cite:Structural basis for substrate binding and catalytic mechanism of a human RNA:m5C methyltransferase NSun6
Nucleic Acids Res., 45, 2017
5WWT
DownloadVisualize
BU of 5wwt by Molmil
Crystal structure of human NSun6/tRNA
Descriptor: Putative methyltransferase NSUN6, tRNA
Authors:Liu, R.J, Long, T, Wang, E.D.
Deposit date:2017-01-04
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.197 Å)
Cite:Structural basis for substrate binding and catalytic mechanism of a human RNA:m5C methyltransferase NSun6
Nucleic Acids Res., 45, 2017
5WWS
DownloadVisualize
BU of 5wws by Molmil
Crystal structure of human NSun6/tRNA/SAM
Descriptor: Putative methyltransferase NSUN6, S-ADENOSYLMETHIONINE, tRNA
Authors:Liu, R.J, Long, T, Wang, E.D.
Deposit date:2017-01-04
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.247 Å)
Cite:Structural basis for substrate binding and catalytic mechanism of a human RNA:m5C methyltransferase NSun6
Nucleic Acids Res., 45, 2017
5WWQ
DownloadVisualize
BU of 5wwq by Molmil
Crystal structure of human NSun6
Descriptor: Putative methyltransferase NSUN6
Authors:Liu, R.J, Long, T, Wang, E.D.
Deposit date:2017-01-04
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.815 Å)
Cite:Structural basis for substrate binding and catalytic mechanism of a human RNA:m5C methyltransferase NSun6
Nucleic Acids Res., 45, 2017
5YXI
DownloadVisualize
BU of 5yxi by Molmil
Designed protein dRafX6
Descriptor: Designed protein dRafX6
Authors:Liu, R.
Deposit date:2017-12-05
Release date:2018-12-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:De novo sequence redesign of a functional Ras-binding domain globally inverted the surface charge distribution and led to extreme thermostability.
Biotechnol.Bioeng., 118, 2021
6LQE
DownloadVisualize
BU of 6lqe by Molmil
Crystal structure of Arabidopsis ARID5 PHD finger in complex with H3K4me3 peptide
Descriptor: 15-mer peptide from Histone H3.2, AT-rich interactive domain-containing protein 4, ZINC ION
Authors:Liu, R, Du, J.
Deposit date:2020-01-13
Release date:2020-06-03
Last modified:2020-08-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis.
Plant Cell, 32, 2020

 

1234>

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon