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PDB: 38 results

8VYC
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BU of 8vyc by Molmil
Graspetide pre-fuscimiditide A1C/T3C variant
Descriptor: ATP-grasp target RiPP
Authors:Link, A.J, Choi, B.
Deposit date:2024-02-08
Release date:2024-05-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cyclic Peptides from Graspetide Biosynthesis and Native Chemical Ligation.
J.Am.Chem.Soc., 146, 2024
6Q1X
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BU of 6q1x by Molmil
Lasso peptide pandonodin
Descriptor: Pandonodin
Authors:Link, A.J, Cheung-Lee, W.L.
Deposit date:2019-08-06
Release date:2019-12-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Pandonodin: A Proteobacterial Lasso Peptide with an Exceptionally Long C-Terminal Tail.
Acs Chem.Biol., 14, 2019
6POR
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BU of 6por by Molmil
Antimicrobial lasso peptide ubonodin
Descriptor: Ubonodin
Authors:Link, A.J, Cheung-Lee, W.L.
Deposit date:2019-07-05
Release date:2019-12-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Discovery of Ubonodin, an Antimicrobial Lasso Peptide Active against Members of the Burkholderia cepacia Complex.
Chembiochem, 21, 2020
8DYM
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BU of 8dym by Molmil
Aspartimidylated Graspetide Amycolimiditide
Descriptor: ATP-grasp target RiPP
Authors:Link, A.J, Choi, B.
Deposit date:2022-08-04
Release date:2022-11-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanistic Analysis of the Biosynthesis of the Aspartimidylated Graspetide Amycolimiditide.
J.Am.Chem.Soc., 144, 2022
7LIF
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BU of 7lif by Molmil
Aspartimidylated omega ester peptide fuscimiditide
Descriptor: Fuscimiditide peptide
Authors:Link, A.J, Elashal, H.E.
Deposit date:2021-01-27
Release date:2022-02-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Biosynthesis and characterization of fuscimiditide, an aspartimidylated graspetide.
Nat.Chem., 14, 2022
7LI2
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BU of 7li2 by Molmil
Omega ester peptide pre-fuscimiditide
Descriptor: Pre-fuscimiditide peptide
Authors:Link, A.J, Elashal, H.E.
Deposit date:2021-01-26
Release date:2022-02-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Biosynthesis and characterization of fuscimiditide, an aspartimidylated graspetide.
Nat.Chem., 14, 2022
6B5W
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BU of 6b5w by Molmil
Benenodin-1-dC5, state 2
Descriptor: Benenodin-1
Authors:Link, A.J, Zong, C.
Deposit date:2017-09-29
Release date:2017-10-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Lasso Peptide Benenodin-1 Is a Thermally Actuated [1]Rotaxane Switch
J. Am. Chem. Soc., 139 (30), 2017
6MW6
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BU of 6mw6 by Molmil
Antimicrobial lasso peptide citrocin
Descriptor: Citrocin
Authors:Link, A.J, Cheung-Lee, W.L.
Deposit date:2018-10-29
Release date:2019-03-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Discovery and structure of the antimicrobial lasso peptide citrocin.
J.Biol.Chem., 294, 2019
7LL7
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BU of 7ll7 by Molmil
[2]Catenane From MccJ25 Variant G12C G21C
Descriptor: GLY-GLY-ALA-GLY-HIS-VAL-PRO-GLU-TYR-PHE, VAL-CYS-ILE-GLY-THR-PRO-ILE-SER-PHE-TYR-CYS
Authors:Link, A.J, Schroeder, H.V.
Deposit date:2021-02-03
Release date:2021-08-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Dynamic covalent self-assembly of mechanically interlocked molecules solely made from peptides.
Nat.Chem., 13, 2021
7LCW
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BU of 7lcw by Molmil
Aspartimidylated Lasso Peptide Lihuanodin
Descriptor: Lasso Peptide Lihuanodin
Authors:Link, A.J, Cao, L.
Deposit date:2021-01-11
Release date:2021-07-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cellulonodin-2 and Lihuanodin: Lasso Peptides with an Aspartimide Post-Translational Modification.
J.Am.Chem.Soc., 143, 2021
2N6U
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BU of 2n6u by Molmil
Solution study of Astexin2-dC4
Descriptor: Astexin2-dC4
Authors:Link, A, Maksimov, M.O.
Deposit date:2015-08-28
Release date:2015-11-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Elucidating the Specificity Determinants of the AtxE2 Lasso Peptide Isopeptidase.
J.Biol.Chem., 290, 2015
5T56
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BU of 5t56 by Molmil
[3]catenane from MccJ25 G12R/I13C/G21C lasso peptide
Descriptor: Microcin J25
Authors:Link, A.J, Allen, C.D.
Deposit date:2016-08-30
Release date:2017-07-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Self-Assembly of Catenanes from Lasso Peptides.
J. Am. Chem. Soc., 138, 2016
2N6V
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BU of 2n6v by Molmil
Solution study of Astexin3
Descriptor: ASTEXIN3
Authors:Link, A, Maksimov, M.O.
Deposit date:2015-08-28
Release date:2015-11-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Elucidating the Specificity Determinants of the AtxE2 Lasso Peptide Isopeptidase.
J.Biol.Chem., 290, 2015
2N68
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BU of 2n68 by Molmil
Solution study of Astexin1
Descriptor: astexin1
Authors:Link, A.J, Maksimov, M.O.
Deposit date:2015-08-13
Release date:2015-11-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Construction of Lasso Peptide Fusion Proteins.
Acs Chem.Biol., 11, 2016
8SVB
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BU of 8svb by Molmil
Antimicrobial lasso peptide achromonodin-1
Descriptor: Achromonodin-1
Authors:Carson, D.V, Cheung-Lee, W.L, So, L, Link, A.J.
Deposit date:2023-05-16
Release date:2023-10-11
Last modified:2023-12-06
Method:SOLUTION NMR
Cite:Discovery, Characterization, and Bioactivity of the Achromonodins: Lasso Peptides Encoded by Achromobacter .
J.Nat.Prod., 86, 2023
8DYN
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BU of 8dyn by Molmil
Antimicrobial lasso peptide cloacaenodin
Descriptor: Cloacaenodin
Authors:Carson, D.V, Link, A.J.
Deposit date:2022-08-04
Release date:2022-12-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cloacaenodin, an Antimicrobial Lasso Peptide with Activity against Enterobacter .
Acs Infect Dis., 9, 2023
6ETS
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BU of 6ets by Molmil
Crystal structure of KDM4D with tetrazolhydrazide compound 1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 4D, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-10-27
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.333 Å)
Cite:Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
6F5R
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BU of 6f5r by Molmil
Crystal Structure of KDM4D with GF028 ligand
Descriptor: 1,2-ETHANEDIOL, 2-(3-oxidanylpropylamino)pyridine-4-carboxylic acid, CHLORIDE ION, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-12-02
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.607 Å)
Cite:Crystal Structure of KDM4D with GF028 ligand
To be published
6ETT
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BU of 6ett by Molmil
Crystal structure of KDM4D with tetrazole compound 4
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 4D, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-10-27
Release date:2019-02-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.257 Å)
Cite:Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
6ETG
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BU of 6etg by Molmil
Crystal structure of KDM4D with tetrazolhydrazide compound 6
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 4D, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-10-26
Release date:2019-02-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.279 Å)
Cite:Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
6F5S
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BU of 6f5s by Molmil
Crystal Structure of KDM4D with tetrazole ligand GF049
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 4D, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-12-02
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structure of KDM4D with tetrazole ligand GF049
To be published
6ETV
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BU of 6etv by Molmil
Crystal structure of KDM4D with tetrazolhydrazide compound 2
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-10-27
Release date:2019-02-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
6ETU
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BU of 6etu by Molmil
Crystal structure of KDM4D with tetrazolhydrazide compound 7
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 4D, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-10-27
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
6ETW
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BU of 6etw by Molmil
Crystal structure of KDM4D with tetrazolhydrazide compound 3
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-10-27
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
6F5Q
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BU of 6f5q by Molmil
Crystal Structure of KDM4D with GF026 ligand
Descriptor: 1,2-ETHANEDIOL, 2-[2-(methylsulfonylamino)ethylamino]pyridine-4-carboxylic acid, CHLORIDE ION, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-12-02
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal Structure of KDM4D with GF026 ligand
To be published

 

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