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PDB: 40 results

8HO2
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crystal structure of Norcoclaurine synthase from Chinese lotus (Nelumbo nucicera)
Descriptor: S-norcoclaurine synthase
Authors:Liao, L.J, Zhao, Y.C.
Deposit date:2022-12-09
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.711 Å)
Cite:The crystal structure of Norcoclaurine synthase from Chinese lotus (Nelumbo nucicera) was investigated to determine its catalytic mechanism and enantioselectivity.
To Be Published
8T01
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BU of 8t01 by Molmil
Solution NMR structure of a multifunctional synthetic peptide Hp-MAP3 derived from Temporin-PTa
Descriptor: Hp-MAP3 peptide
Authors:Freitas, C.D.P, Migliolo, L, Silva, P.S, Liao, L.M.
Deposit date:2023-05-31
Release date:2024-06-12
Method:SOLUTION NMR
Cite:Solution NMR structure of a multifunctional synthetic peptide Hp-MAP3 derived from Temporin-PTa.
To Be Published
8T3H
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BU of 8t3h by Molmil
Solution NMR structure alpha-helix 3 of Cry10Aa protein
Descriptor: Pesticidal crystal protein Cry10Aa peptide
Authors:Barra, J.B, Freitas, C.D.P, Rios, T.B, Maximiano, M.R, Fernandes, F.C, Amorim, G.C, Porto, W.F, Grossi-de-Sa, M.F, Franco, O.F, Liao, L.M.
Deposit date:2023-06-07
Release date:2024-06-12
Method:SOLUTION NMR
Cite:Alpha-helix 3 of Cry10Aa protein
To Be Published
8T3N
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BU of 8t3n by Molmil
Solution NMR structure of synthetic peptide AMPCry10Aa_5 rational designed from Cry10Aa bacterial protein
Descriptor: Pesticidal crystal protein Cry10Aa peptide
Authors:Barra, J.B, Freitas, C.D.P, Rios, T.B, Maximiano, M.R, Fernandes, F.C, Amorim, G.C, Porto, W.F, Grossi-de-Sa, M.F, Franco, O.F, Liao, L.M.
Deposit date:2023-06-07
Release date:2024-06-12
Method:SOLUTION NMR
Cite:Solution NMR structure of synthetic peptide AMPCry10Aa_5 rational designed from Cry10Aa bacterial protein
To Be Published
2XCN
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Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: MAGNESIUM ION, N-[(CYCLOPENTYLOXY)CARBONYL]-3-METHYL-L-VALYL-(4R)-N-{(1R)-3-HYDROXY-1-[HYDROXY(OXIDO)BORANYL]PROPYL}-4-(ISOQUINOLIN-1-YLOXY)-L-PROLINAMIDE, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-23
Release date:2010-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
6DUU
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BU of 6duu by Molmil
Three-Dimensional Structures for mastoparano-MO
Descriptor: mastoparano-MO
Authors:Alves, E.S.F, Rodrigues, L.V, Liao, L.M.
Deposit date:2018-06-22
Release date:2019-06-26
Method:SOLUTION NMR
Cite:Three-Dimensional Structures for mastoparano-L
To Be Published
7T7W
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BU of 7t7w by Molmil
The peptide Lt-MAP4 is an analog derived from the Ltc-3a. The primary sequence of the parental peptide was used as template for rational design, using the amino acid residues for modification of charge and hydrophobicity.
Descriptor: Lt-MAP4 peptide
Authors:Freitas, C.D.P, Moraes, L.F.R.N, Migliolo, L, Liao, L.M.
Deposit date:2021-12-15
Release date:2023-01-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two-dimensional NMR structural study of latarasin analogue Lt-MAP4 multifunctional synthetic peptide.
To Be Published
6KSW
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BU of 6ksw by Molmil
Cryo-EM structure of the human concentrative nucleoside transporter CNT3
Descriptor: Solute carrier family 28 member 3
Authors:Zhou, Y.X, Liao, L.H, Li, J.L, Xiao, Q.J, Sun, L.F, Deng, D.
Deposit date:2019-08-26
Release date:2020-08-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the human concentrative nucleoside transporter CNT3.
Plos Biol., 18, 2020
2XNI
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BU of 2xni by Molmil
Protein-ligand complex of a novel macrocyclic HCV NS3 protease inhibitor derived from amino cyclic boronates
Descriptor: (1-{[(10-tert-butyl-15,15-dimethyl-3,9,12-trioxo-6,7,9,10,11,12,14,15,16,17,18,19,23,23a-tetradecahydro-1H,5H-2,23:5,8-dimethano-4,13,2,8,11-benzodioxatriazacyclohenicosin-7(3H)-yl)carbonyl]amino}-3-hydroxypropyl)(trihydroxy)borate(1-), MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Zhou, Y, Li, Q, Plattner, J.J, Baker, S.J, Zhang, S, Kazmierski, W.M, Wright, L.L, Smith, G.K, Grimes, R.M, Crosby, R.M, Creech, K.L, Carballo, L.H, Slater, M.J, Jarvest, R.L, Thommes, P, Hubbard, J.A, Convery, M.A, Nassau, P.M, McDowell, W, Skarzynski, T.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, Pennicott, L.E, Zou, W, Wright, J.
Deposit date:2010-08-02
Release date:2011-08-17
Last modified:2012-09-26
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Novel Macrocyclic Hcv Ns3 Protease Inhibitors Derived from Alpha-Amino Cyclic Boronates.
Bioorg.Med.Chem.Lett., 20, 2010
2XCF
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BU of 2xcf by Molmil
Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: CYCLOPENTYL N-[(2S)-1-[(2S,4R)-2-[[(4R)-8-HYDROXY-1,6,10-TRIOXA-5$L^{4}-BORASPIRO[4.5]DECAN-4-YL]CARBAMOYL]-4-ISOQUINOLIN-1-YLOXY-PYRROLIDIN-1-YL]-3,3-DIMETHYL-1-OXO-BUTAN-2-YL]CARBAMATE, MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-22
Release date:2010-06-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
6Q08
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BU of 6q08 by Molmil
Synoeca peptide was isolated from the venom of wasp synoeca surinama.
Descriptor: Synoeca peptide
Authors:Alves, E.S, Rodrigues, L.V, Liao, L.M.
Deposit date:2019-08-01
Release date:2020-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR STRUCTURE OF THE ANTIMICROBIAL PEPTIDE ISOLATED FROM THE VENOM OF WASP Synoeca Surinama.
To Be Published
5J6W
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BU of 5j6w by Molmil
NMR structures of hylin-a1 analogs: Hylin-K
Descriptor: Hylin-K
Authors:Crusca Jr, E, Matos, C.O, Liao, L.M, Oliveira, A.L.
Deposit date:2016-04-05
Release date:2017-04-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structures and molecular dynamics simulation of hylin-a1 peptide analogs interacting with micelles.
J. Pept. Sci., 23, 2017
5J6T
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BU of 5j6t by Molmil
NMR structures of hylin-a1 analogs: Hylin-Ac
Descriptor: Hylin-a1
Authors:Crusca Jr, E, Matos, C.O, Liao, L.M, Oliveira, A.L.
Deposit date:2016-04-05
Release date:2017-04-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structures and molecular dynamics simulation of hylin-a1 peptide analogs interacting with micelles.
J. Pept. Sci., 23, 2017
8ERU
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BU of 8eru by Molmil
Solution NMR structure of a computationally designed mastoparan-like peptide, mastoparan-R4
Descriptor: Mastoparan-R4 peptide
Authors:Freitas, C.D.P, Oshiro, K.G.N, Macedo, M.L.R, Cardoso, M.H, Franco, O.L, Liao, L.M.
Deposit date:2022-10-12
Release date:2023-10-18
Method:SOLUTION NMR
Cite:Solution NMR structure of a computacionally designed mastoparan-like peptide, mastoparan-R4
To Be Published
2N0V
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BU of 2n0v by Molmil
Backbone 1H, Chemical Shift Assignments for Cn-APM1
Descriptor: Antimicrobial peptide 1
Authors:Santana, M.J, Oliveira, A.L, Queiroz Jr, L.K, Mandal, S.M, Matos, C.O, Dias, R.O, Franco, O.L, Liao, L.M.
Deposit date:2015-03-17
Release date:2015-12-23
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural insights into Cn-AMP1, a short disulfide-free multifunctional peptide from green coconut water.
Febs Lett., 589, 2015
8EP5
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BU of 8ep5 by Molmil
Solution NMR structure of a computationally designed mastoparan-like peptide, mastoparan-R1
Descriptor: Mastoparan-R1 peptide
Authors:Freitas, C.D.P, Oshiro, K.G.N, Macedo, M.L.R, Cardoso, M.H, Franco, O.L, Liao, L.M.
Deposit date:2022-10-05
Release date:2023-10-18
Method:SOLUTION NMR
Cite:Solution NMR structure of a computationally designed mastoparan-like peptide, mastoparan-R1.
To Be Published
2N9R
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BU of 2n9r by Molmil
Novel antimicrobial peptide PaDBS1R1 designed from the ribosomal protein L39E from Pyrobaculum aerophilum using bioinformatics
Descriptor: Antimicrobial peptide PaDBS1R1
Authors:Irazazabal, L.S.F, Porto, W.F, Alves, E.S.F, Matos, C.O, Hancock, R.E.W, Haney, E, Ribeiro, S.M, Liao, L.M, Ladram, A.S.F, Franco, O.L.
Deposit date:2015-12-03
Release date:2016-12-07
Method:SOLUTION NMR
Cite:Novel antimicrobial peptide PaDBS1R1 designed from the ribosomal protein L39E from Pyrobaculum aerophilum using bioinformatics
To be Published
6KHO
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BU of 6kho by Molmil
Crystal structure of Oryza sativa TDC with PLP
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, Y.Z, Liao, L.J, Liu, X.K, Guo, Y, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-07-16
Release date:2020-07-15
Method:X-RAY DIFFRACTION (1.972 Å)
Cite:Crystal structure ofOryza sativaTDC reveals the substrate specificity for TDC-mediated melatonin biosynthesis.
J Adv Res, 24, 2020
6KHN
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BU of 6khn by Molmil
Crystal structure of Oryza sativa TDC with PLP and SEROTONIN
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, Y.Z, Liao, L.J, Liu, X.K, Guo, Y, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-07-16
Release date:2020-07-15
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:Crystal structure ofOryza sativaTDC reveals the substrate specificity for TDC-mediated melatonin biosynthesis.
J Adv Res, 24, 2020
6KHP
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BU of 6khp by Molmil
Crystal structure of Oryza sativa TDC with PLP and tryptamine
Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, ACETATE ION, CALCIUM ION, ...
Authors:Zhou, Y.Z, Liao, L.J, Liu, X.K, Guo, Y, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-07-16
Release date:2020-07-15
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Crystal structure ofOryza sativaTDC reveals the substrate specificity for TDC-mediated melatonin biosynthesis.
J Adv Res, 24, 2020
8IWK
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BU of 8iwk by Molmil
ABCG25 Wild Type purified with DDM plus CHS in ABA-bound state
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ABC transporter G family member 25
Authors:Sun, L, Liu, X, Ying, W, Liao, L, Wei, H.
Deposit date:2023-03-30
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:ABCG25 Wild Type purified with DDM plus CHS in ABA-bound state
To Be Published
8IWJ
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BU of 8iwj by Molmil
ABCG25 Wild Type in Apo-state
Descriptor: ABC transporter G family member 25
Authors:Sun, L, Liu, X, Ying, W, Liao, L, Wei, H.
Deposit date:2023-03-30
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:ABCG25 Wild Type in Apo-state
To Be Published
8IWN
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BU of 8iwn by Molmil
ABCG25 EQ mutant in ATP-bound state
Descriptor: ABC transporter G family member 25, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Sun, L, Liu, X, Ying, W, Liao, L, Wei, H.
Deposit date:2023-03-30
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:ABCG25 EQ mutant in ATP-bound state
To Be Published
6MI9
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BU of 6mi9 by Molmil
The peptide PaAMP1B3 is an analog derived from the PaAMP1. The sequence of the ribosomal protein of Pyrobaculum aerophylum was used as template for rational design, using the Joker algorithm.
Descriptor: PRO-MET-ALA-ARG-ASN-LYS-ILE-LEU-GLY-LYS-ILE-LEU-ARG-LYS-ILE-ALA-ALA-PHE-LYS
Authors:Mundim, H.M, Alves, E.S.F, Rodrigues, L.V, Liao, L.M.
Deposit date:2018-09-19
Release date:2019-09-25
Method:SOLUTION NMR
Cite:NMR SOLUTION STRUCTURE OF THE ANTIMICROBIAL PEPTIDE PAAMP1B3.
To Be Published
6DUL
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BU of 6dul by Molmil
Three-Dimensional Structures for mastoparano-L
Descriptor: mastoparano-L
Authors:Alves, E.S.F, Rodriguez, L.V, Liao, L.M.
Deposit date:2018-06-21
Release date:2019-06-26
Method:SOLUTION NMR
Cite:Three-Dimensional Structures for mastoparano-L
To Be Published

 

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