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PDB: 148 results

7LHQ
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Solution structure of SARS-CoV-2 nonstructural protein 7 at pH 7.0
Descriptor: Non-structural protein 7
Authors:Lee, Y, Tonelli, M, Anderson, T.K, Kirchdoerfer, R.N, Henzler-Wildman, K, Lee, W.
Deposit date:2021-01-26
Release date:2022-02-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:pH-dependent polymorphism of the structure of SARS-CoV-2 nsp7
Biorxiv, 2021
8J0J
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BU of 8j0j by Molmil
AtSLAC1 8D mutant in closed state
Descriptor: CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, Guard cell S-type anion channel SLAC1,Green fluorescent protein
Authors:Lee, Y, Lee, S.
Deposit date:2023-04-11
Release date:2023-11-22
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.
Nat Commun, 14, 2023
8J1E
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BU of 8j1e by Molmil
AtSLAC1 in open state
Descriptor: CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, Guard cell S-type anion channel SLAC1,Green fluorescent protein
Authors:Lee, Y, Lee, S.
Deposit date:2023-04-12
Release date:2023-11-22
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.
Nat Commun, 14, 2023
6LVT
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BU of 6lvt by Molmil
Solution structure of holo acyl carrier protein from Thermotoga maritima
Descriptor: Acyl carrier protein
Authors:Lee, Y, Kim, Y.
Deposit date:2020-02-05
Release date:2020-12-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Characterization of an ACP from Thermotoga maritima : Insights into Hyperthermal Adaptation.
Int J Mol Sci, 21, 2020
6TKO
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BU of 6tko by Molmil
Phosphorylated turkey beta1 adrenoceptor with bound agonist formoterol coupled to arrestin-2 in lipid nanodisc.
Descriptor: Beta-1 adrenergic receptor, Beta-arrestin-1, Fab30 heavy chain, ...
Authors:Lee, Y, Tate, C.G.
Deposit date:2019-11-28
Release date:2020-06-17
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular basis of beta-arrestin coupling to formoterol-bound beta1-adrenoceptor.
Nature, 583, 2020
4XSJ
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BU of 4xsj by Molmil
Crystal structure of the N-terminal domain of the human mitochondrial calcium uniporter fused with T4 lysozyme
Descriptor: Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION
Authors:Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
Deposit date:2015-01-22
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
4XTB
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BU of 4xtb by Molmil
Crystal structure of the N-terminal domain of the human mitochondrial calcium uniporter
Descriptor: Calcium uniporter protein, mitochondrial, TETRAETHYLENE GLYCOL
Authors:Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
Deposit date:2015-01-23
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
7QRU
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BU of 7qru by Molmil
Structure of Bacillus pseudofirmus Mrp antiporter complex, monomer
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Na(+)/H(+) antiporter subunit B, Na(+)/H(+) antiporter subunit C, ...
Authors:Lee, Y.
Deposit date:2022-01-12
Release date:2022-11-09
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.24 Å)
Cite:Ion transfer mechanisms in Mrp-type antiporters from high resolution cryoEM and molecular dynamics simulations.
Nat Commun, 13, 2022
8KHO
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BU of 8kho by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two Cobalt ions and Methionine
Descriptor: COBALT (II) ION, METHIONINE, Methionine aminopeptidase 1D, ...
Authors:Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
Deposit date:2023-08-22
Release date:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8KHN
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BU of 8khn by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two cobalt ions
Descriptor: COBALT (II) ION, Methionine aminopeptidase 1D, mitochondrial, ...
Authors:Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
Deposit date:2023-08-22
Release date:2024-01-24
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8KHM
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BU of 8khm by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in the unbound form
Descriptor: GLYCEROL, Methionine aminopeptidase 1D, mitochondrial, ...
Authors:Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
Deposit date:2023-08-22
Release date:2024-01-24
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8KA2
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BU of 8ka2 by Molmil
Crystal structure of the RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) from Vibrio vulnificus
Descriptor: RDTND-RID CBD
Authors:Lee, Y, Choi, S, Hwang, J, Kim, M.H.
Deposit date:2023-08-02
Release date:2024-07-10
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8K9Z
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BU of 8k9z by Molmil
Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin
Descriptor: CALCIUM ION, Calmodulin-2, RDTND-RID CBD
Authors:Lee, Y, Choi, S, Hwang, J, Kim, M.H.
Deposit date:2023-08-02
Release date:2024-07-10
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8KA1
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BU of 8ka1 by Molmil
Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-free calmodulin
Descriptor: Calmodulin-2, MAGNESIUM ION, RDTND-RID CBD
Authors:Lee, Y, Choi, S, Hwang, J, Kim, M.H.
Deposit date:2023-08-02
Release date:2024-07-10
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8KA0
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BU of 8ka0 by Molmil
Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin and a nicotinamide adenine dinucleotide (NAD+)
Descriptor: CALCIUM ION, Calmodulin-2, GLYCEROL, ...
Authors:Lee, Y, Choi, S, Hwang, J, Kim, M.H.
Deposit date:2023-08-02
Release date:2024-07-10
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
6LVU
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BU of 6lvu by Molmil
Crystal structure of apo acyl carrier protein from Thermotoga maritima
Descriptor: Acyl carrier protein, ZINC ION
Authors:Lee, Y, Lee, W.C, Kim, Y.
Deposit date:2020-02-05
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:Structural Characterization of an ACP fromThermotoga maritima: Insights into Hyperthermal Adaptation.
Int J Mol Sci, 21, 2020
5BZ6
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BU of 5bz6 by Molmil
Crystal structure of the N-terminal domain single mutant (S92A) of the human mitochondrial calcium uniporter fused with T4 lysozyme
Descriptor: Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION
Authors:Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
Deposit date:2015-06-11
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
8GW7
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BU of 8gw7 by Molmil
AtSLAC1 6D mutant in open state
Descriptor: CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, Guard cell S-type anion channel SLAC1,Green fluorescent protein (Fragment)
Authors:Lee, Y, Lee, S.
Deposit date:2022-09-16
Release date:2023-11-15
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.
Nat Commun, 14, 2023
8GW6
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BU of 8gw6 by Molmil
AtSLAC1 6D mutant in closed state
Descriptor: CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, Guard cell S-type anion channel SLAC1,Green fluorescent protein (Fragment)
Authors:Lee, Y, Lee, S.
Deposit date:2022-09-16
Release date:2023-11-15
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.
Nat Commun, 14, 2023
7NF8
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BU of 7nf8 by Molmil
Ovine (b0,+AT-rBAT)2 hetero-tetramer, asymmetric unit, rigid-body fitted
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lee, Y, Kuehlbrandt, W.
Deposit date:2021-02-05
Release date:2022-01-19
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Ca 2+ -mediated higher-order assembly of heterodimers in amino acid transport system b 0,+ biogenesis and cystinuria.
Nat Commun, 13, 2022
7NF7
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BU of 7nf7 by Molmil
Ovine rBAT ectodomain homodimer, asymmetric unit
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Lee, Y, Kuehlbrandt, W.
Deposit date:2021-02-05
Release date:2022-01-19
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Ca 2+ -mediated higher-order assembly of heterodimers in amino acid transport system b 0,+ biogenesis and cystinuria.
Nat Commun, 13, 2022
7NF6
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BU of 7nf6 by Molmil
Ovine b0,+AT-rBAT heterodimer
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lee, Y, Kuehlbrandt, W.
Deposit date:2021-02-05
Release date:2022-01-19
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Ca 2+ -mediated higher-order assembly of heterodimers in amino acid transport system b 0,+ biogenesis and cystinuria.
Nat Commun, 13, 2022
5TSP
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BU of 5tsp by Molmil
Crystal structure of the catalytic domain of Clostridium perfringens neuraminidase (NanI) in complex with a CHES
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, Sialidase
Authors:Lee, Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Kang, J.Y, Jin, M.S, Ryu, Y.B, Park, K.H, Eom, S.H.
Deposit date:2016-10-31
Release date:2017-03-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Crystal structure of the catalytic domain of Clostridium perfringens neuraminidase in complex with a non-carbohydrate-based inhibitor, 2-(cyclohexylamino)ethanesulfonic acid
Biochem. Biophys. Res. Commun., 486, 2017
4X5M
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BU of 4x5m by Molmil
Crystal structure of SemiSWEET in the inward-open conformation
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OLEIC ACID, ...
Authors:Lee, Y, Nishizawa, T, Yamashita, K, Ishitani, R, Nureki, O.
Deposit date:2014-12-05
Release date:2015-01-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the facilitative diffusion mechanism by SemiSWEET transporter
Nat Commun, 6, 2015
4X5N
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BU of 4x5n by Molmil
Crystal structure of SemiSWEET in the inward-open and outward-open conformations
Descriptor: Uncharacterized protein
Authors:Lee, Y, Nishizawa, T, Yamashita, K, Ishitani, R, Nureki, O.
Deposit date:2014-12-05
Release date:2015-01-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the facilitative diffusion mechanism by SemiSWEET transporter
Nat Commun, 6, 2015

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