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PDB: 75 results

4LFU
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BU of 4lfu by Molmil
Crystal structure of Escherichia coli SdiA in the space group C2
Descriptor: CHLORIDE ION, Regulatory protein SdiA, TETRAETHYLENE GLYCOL
Authors:Kim, T, Duong, T, Wu, C.A, Choi, J, Lan, N, Kang, S.W, Lokanath, N.K, Shin, D, Hwang, H.Y, Kim, K.K.
Deposit date:2013-06-27
Release date:2014-03-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural insights into the molecular mechanism of Escherichia coli SdiA, a quorum-sensing receptor
Acta Crystallogr.,Sect.D, 70, 2014
4LGW
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BU of 4lgw by Molmil
Crystal structure of Escherichia coli SdiA in the space group P6522
Descriptor: GLYCEROL, Regulatory protein SdiA
Authors:Kim, T, Duong, T, Wu, C.A, Choi, J, Lan, N, Kang, S.W, Lokanath, N.K, Shin, D, Hwang, H.Y, Kim, K.K.
Deposit date:2013-06-28
Release date:2014-03-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the molecular mechanism of Escherichia coli SdiA, a quorum-sensing receptor
Acta Crystallogr.,Sect.D, 70, 2014
5IS1
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BU of 5is1 by Molmil
Crystal structure of the extracellular domain of sensor histidine kinase YycG from Staphylococcus aureus at 2.0 Angstrom resolution
Descriptor: Histidine kinase
Authors:Kim, T, Choi, J, Lee, S, Kim, K.K.
Deposit date:2016-03-15
Release date:2016-07-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Structural Studies on the Extracellular Domain of Sensor Histidine Kinase YycG from Staphylococcus aureus and Its Functional Implications
J.Mol.Biol., 428, 2016
7W8E
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BU of 7w8e by Molmil
Sweet taste protein Brazzein - R43A
Descriptor: Defensin-like protein, SODIUM ION
Authors:Kim, T, Yoon, T.
Deposit date:2021-12-07
Release date:2022-12-14
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Sweet taste protein Brazzein - R43A
To Be Published
7W8H
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BU of 7w8h by Molmil
Sweet taste protein Brazzein mutant - D29K
Descriptor: Defensin-like protein
Authors:Kim, T, Yoon, T.
Deposit date:2021-12-07
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.50100446 Å)
Cite:Sweet taste protein Brazzein mutant - D29K
To be published
4TWZ
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BU of 4twz by Molmil
Crystal Structure Analysis of E Coli. RecA Protein
Descriptor: MAGNESIUM ION, Protein RecA
Authors:Hikima, T, Hiraki, T, Furuse, M, Ikawa, S, Iwasaki, W, Shibata, T, Kamiya, N.
Deposit date:2014-07-02
Release date:2015-07-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Loop L1 governs the DNA-binding specificity and order for RecA-catalyzed reactions in homologous recombination and DNA repair
Nucleic Acids Res., 43, 2015
3A8W
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BU of 3a8w by Molmil
Crystal Structure of PKCiota kinase domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Protein kinase C iota type, SULFATE ION
Authors:Takimura, T, Kamata, K.
Deposit date:2009-10-11
Release date:2010-05-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the PKC-iota kinase domain in its ATP-bound and apo forms reveal defined structures of residues 533-551 in the C-terminal tail and their roles in ATP binding
Acta Crystallogr.,Sect.D, 66, 2010
3A8X
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BU of 3a8x by Molmil
Crystal Structure of PKCiota kinase domain
Descriptor: Protein kinase C iota type, SULFATE ION
Authors:Takimura, T, Kamata, K.
Deposit date:2009-10-11
Release date:2010-05-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the PKC-iota kinase domain in its ATP-bound and apo forms reveal defined structures of residues 533-551 in the C-terminal tail and their roles in ATP binding
Acta Crystallogr.,Sect.D, 66, 2010
2Z1Q
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BU of 2z1q by Molmil
Crystal structure of acyl CoA dehydrogenase
Descriptor: Acyl-CoA dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hikima, T, Kawano, Y, Nodake, Y, Kamiya, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-11
Release date:2008-05-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of acyl CoA dehydrogenase from Thermus thermophilus HB8
To be Published
6D33
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BU of 6d33 by Molmil
Crystal structure of BH1352 2-deoxyribose-5-phosphate from Bacillus halodurans
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyribose-phosphate aldolase, GLYCEROL
Authors:Stogios, P.J, Skarina, T, Kim, T, Yim, V, Yakunin, A, Savchenko, A.
Deposit date:2018-04-14
Release date:2019-10-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Rational engineering of 2-deoxyribose-5-phosphate aldolases for the biosynthesis of (R)-1,3-butanediol.
J.Biol.Chem., 295, 2020
8WP9
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BU of 8wp9 by Molmil
Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
Descriptor: Small heat shock protein HSP16.5
Authors:Lee, J, Ryu, B, Kim, T, Kim, K.K.
Deposit date:2023-10-09
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Cryo-EM structure of a 16.5-kDa small heat-shock protein from Methanocaldococcus jannaschii.
Int.J.Biol.Macromol., 258, 2024
5JNM
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BU of 5jnm by Molmil
Crystal structure of MtlD from Staphylococcus aureus at 1.7-Angstrom resolution
Descriptor: Mannitol-1-phosphate 5-dehydrogenase, SULFATE ION
Authors:Ta, H.M, Nguyen, T, Kim, T, Kim, K.K.
Deposit date:2016-04-30
Release date:2017-11-08
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Targeting Mannitol Metabolism as an Alternative Antimicrobial Strategy Based on the Structure-Function Study of Mannitol-1-Phosphate Dehydrogenase in Staphylococcus aureus.
Mbio, 10, 2019
5HOE
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BU of 5hoe by Molmil
Crystal structrue of Est24, a carbohydrate acetylesterase from Sinorhizobium meliloti
Descriptor: HEXAETHYLENE GLYCOL, Hydrolase, PHOSPHATE ION
Authors:Oh, C, Ryu, B.H, An, D.R, Nguyen, D.D, Yoo, W, Kim, T, Ngo, D.T, Kim, H.S, Park, J.S, Kim, K.K, Kim, T.D.
Deposit date:2016-01-19
Release date:2016-04-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural and Biochemical Characterization of an Octameric Carbohydrate Acetylesterase from Sinorhizobium meliloti.
Febs Lett., 590, 2016
4KIA
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BU of 4kia by Molmil
Crystal structure of LmHde, heme-degrading enzyme, from Listeria monocytogenes
Descriptor: Lmo2213 protein
Authors:Kim, K.K, Duong, T, Kim, T.
Deposit date:2013-05-02
Release date:2014-03-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and functional characterization of an Isd-type haem-degradation enzyme from Listeria monocytogenes.
Acta Crystallogr.,Sect.D, 70, 2014
3LK4
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BU of 3lk4 by Molmil
Crystal structure of CapZ bound to the uncapping motif from CD2AP
Descriptor: CD2-associated protein, F-actin-capping protein subunit alpha-1, F-actin-capping protein subunit beta isoforms 1 and 2
Authors:Hernandez-Valladares, M, Kim, T, Kannan, B, Tung, A, Cooper, J.A, Robinson, R.C.
Deposit date:2010-01-27
Release date:2010-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural characterization of a capping protein interaction motif defines a family of actin filament regulators.
Nat.Struct.Mol.Biol., 17, 2010
3LK2
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BU of 3lk2 by Molmil
Crystal structure of CapZ bound to the uncapping motif from CARMIL
Descriptor: F-actin-capping protein subunit alpha-1, F-actin-capping protein subunit beta isoforms 1 and 2, Leucine-rich repeat-containing protein 16A
Authors:Hernandez-Valladares, M, Kim, T, Kannan, B, Tung, A, Aguda, A.H, Larsson, M, Cooper, J.A, Robinson, R.C.
Deposit date:2010-01-27
Release date:2010-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of a capping protein interaction motif defines a family of actin filament regulators.
Nat.Struct.Mol.Biol., 17, 2010
3LK3
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BU of 3lk3 by Molmil
Crystal structure of CapZ bound to the CPI and CSI uncapping motifs from CARMIL
Descriptor: F-actin-capping protein subunit alpha-1, F-actin-capping protein subunit beta isoforms 1 and 2, Leucine-rich repeat-containing protein 16A
Authors:Hernandez-Valladares, M, Kim, T, Kannan, B, Tung, A, Cooper, J.A, Robinson, R.C.
Deposit date:2010-01-27
Release date:2010-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural characterization of a capping protein interaction motif defines a family of actin filament regulators.
Nat.Struct.Mol.Biol., 17, 2010
3IRC
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BU of 3irc by Molmil
Crystal structure analysis of dengue-1 envelope protein domain III
Descriptor: ENVELOPE PROTEIN, SULFATE ION
Authors:Nelson, C.A, Kim, T, Warren, J.T, Chruszcz, M, Minor, W, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-08-21
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure Analysis of the Dengue-1 Envelope Protein Domain III
To be Published
6MSW
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BU of 6msw by Molmil
Crystal structure of BH1352 2-deoxyribose-5-phosphate from Bacillus halodurans, K184L mutant
Descriptor: Deoxyribose-phosphate aldolase, GLYCEROL
Authors:Stogios, P.J, Skarina, T, Kim, T, Yim, V, Yakunin, A, Savchenko, A.
Deposit date:2018-10-18
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.169 Å)
Cite:Rational engineering of 2-deoxyribose-5-phosphate aldolases for the biosynthesis of (R)-1,3-butanediol.
J.Biol.Chem., 295, 2020
1MKC
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BU of 1mkc by Molmil
C-TERMINAL DOMAIN OF MIDKINE
Descriptor: PROTEIN (MIDKINE)
Authors:Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
5MMN
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BU of 5mmn by Molmil
E. coli DNA Gyrase B 24 kDa ATPase domain in complex with 1-ethyl-3-[8-methyl-5-(2-methyl-pyridin-4-yl)-isoquinolin-3-yl]-urea
Descriptor: 1-ethyl-3-[8-methyl-5-(2-methylpyridin-4-yl)isoquinolin-3-yl]urea, DNA gyrase subunit B
Authors:Panchaud, P, Bruyere, T, Blumstein, A.-C, Bur, D, Chambovey, A, Ertel, E.A, Gude, M, Hubschwerlen, C, Jacob, L, Kimmerlin, T, Pfeifer, T, Prade, L, Seiler, P, Ritz, D, Rueedi, G.
Deposit date:2016-12-12
Release date:2017-04-26
Last modified:2017-05-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery and Optimization of Isoquinoline Ethyl Ureas as Antibacterial Agents.
J. Med. Chem., 60, 2017
5MMO
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BU of 5mmo by Molmil
E. coli DNA Gyrase B 24 kDa ATPase domain in complex with [3-(3-ethyl-ureido)-5-(pyridin-4-yl)-isoquinolin-8-yl-methyl]-carbamic acid prop-2-ynyl ester
Descriptor: DNA gyrase subunit B, PHOSPHATE ION, prop-2-ynyl ~{N}-[[3-(ethylcarbamoylamino)-5-pyridin-4-yl-isoquinolin-8-yl]methyl]carbamate
Authors:Panchaud, P, Bruyere, T, Blumstein, A.-C, Bur, D, Chambovey, A, Ertel, E.A, Gude, M, Hubschwerlen, C, Jacob, L, Kimmerlin, T, Pfeifer, T, Prade, L, Seiler, P, Ritz, D, Rueedi, G.
Deposit date:2016-12-12
Release date:2017-04-26
Last modified:2017-05-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Discovery and Optimization of Isoquinoline Ethyl Ureas as Antibacterial Agents.
J. Med. Chem., 60, 2017
5MMP
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BU of 5mmp by Molmil
E. coli DNA Gyrase B 24 kDa ATPase domain in complex with 1-ethyl-3-[5-pyridin-4-yl-8-(pyridin-3-ylamino)-isoquinolin-3-yl]-urea
Descriptor: 1-ethyl-3-[5-pyridin-4-yl-8-(pyridin-3-ylamino)isoquinolin-3-yl]urea, DNA gyrase subunit B
Authors:Panchaud, P, Bruyere, T, Blumstein, A.-C, Bur, D, Chambovey, A, Ertel, E.A, Gude, M, Hubschwerlen, C, Jacob, L, Kimmerlin, T, Pfeifer, T, Prade, L, Seiler, P, Ritz, D, Rueedi, G.
Deposit date:2016-12-12
Release date:2017-04-26
Last modified:2017-05-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovery and Optimization of Isoquinoline Ethyl Ureas as Antibacterial Agents.
J. Med. Chem., 60, 2017
5HNC
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BU of 5hnc by Molmil
Synchrotron X-ray single crystal diffraction from protein microcrystals via magnetically oriented microcrystal arrays in gels
Descriptor: Lysozyme C
Authors:Tsukui, S, Kimura, F, Kusaka, K, Baba, S, Mizuno, N, Kimura, T.
Deposit date:2016-01-18
Release date:2016-07-20
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Neutron and X-ray single-crystal diffraction from protein microcrystals via magnetically oriented microcrystal arrays in gels.
Acta Crystallogr D Struct Biol, 72, 2016
5HNL
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BU of 5hnl by Molmil
In-house X-ray single crystal diffraction from protein microcrystals via magnetically oriented microcrystal arrays in gels
Descriptor: Lysozyme C
Authors:Tsukui, S, Kimura, F, Kusaka, K, Baba, S, Mizuno, N, Kimura, T.
Deposit date:2016-01-18
Release date:2016-07-20
Method:X-RAY DIFFRACTION (2.424 Å)
Cite:Neutron and X-ray single-crystal diffraction from protein microcrystals via magnetically oriented microcrystal arrays in gels.
Acta Crystallogr D Struct Biol, 72, 2016

 

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