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PDB: 272 results

2G97
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BU of 2g97 by Molmil
Crystal Structure of Visfatin/Pre-B Cell Colony Enhancing Factor 1/Nicotinamide Phosphoribosyltransferase In Complex with the Specific Inhibitor FK-866
Descriptor: (2E)-N-{4-[1-(benzenecarbonyl)piperidin-4-yl]butyl}-3-(pyridin-3-yl)prop-2-enamide, Nicotinamide phosphoribosyltransferase
Authors:Kim, M.-K, Eom, S.H.
Deposit date:2006-03-05
Release date:2006-08-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Visfatin/Pre-B Cell Colony-enhancing Factor 1/Nicotinamide Phosphoribosyltransferase, Free and in Complex with the Anti-cancer Agent FK-866
J.Mol.Biol., 362, 2006
3KZ9
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BU of 3kz9 by Molmil
Crystal structure of the master transcriptional regulator, SmcR, in Vibrio vulnificus provides insight into its DNA recognition mechanism
Descriptor: SULFATE ION, SmcR
Authors:Kim, M.H, Kim, Y, Choi, W.-C, Hwang, J.
Deposit date:2009-12-08
Release date:2010-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of SmcR, a quorum-sensing master regulator of Vibrio vulnificus, provides insight into its regulation of transcription
J.Biol.Chem., 285, 2010
4X3N
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BU of 4x3n by Molmil
Crystal structure of 34 kDa F-actin bundling protein from Dictyostelium discoideum
Descriptor: CALCIUM ION, CITRIC ACID, Calcium-regulated actin-bundling protein
Authors:Kim, M.-K, Kim, J.-H, Kim, J.-S, Kang, S.-O.
Deposit date:2014-12-01
Release date:2015-09-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure of the 34 kDa F-actin-bundling protein ABP34 from Dictyostelium discoideum.
Acta Crystallogr.,Sect.D, 71, 2015
4FEC
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Crystal Structure of Htt36Q3H
Descriptor: Maltose-binding periplasmic protein,Huntingtin, ZINC ION
Authors:Kim, M.
Deposit date:2012-05-30
Release date:2013-03-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Beta conformation of polyglutamine track revealed by a crystal structure of Huntingtin N-terminal region with insertion of three histidine residues.
Prion, 7, 2013
4FE8
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BU of 4fe8 by Molmil
Crystal Structure of Htt36Q3H-EX1-X1-C1(Alpha)
Descriptor: Maltose-binding periplasmic protein,Huntingtin, ZINC ION
Authors:Kim, M.
Deposit date:2012-05-29
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Beta conformation of polyglutamine track revealed by a crystal structure of Huntingtin N-terminal region with insertion of three histidine residues.
Prion, 7, 2013
4FED
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BU of 4fed by Molmil
Crystal Structure of Htt36Q3H
Descriptor: CALCIUM ION, Maltose-binding periplasmic protein,Huntingtin, ZINC ION
Authors:Kim, M.
Deposit date:2012-05-30
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.807 Å)
Cite:Beta conformation of polyglutamine track revealed by a crystal structure of Huntingtin N-terminal region with insertion of three histidine residues.
Prion, 7, 2013
8H58
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BU of 8h58 by Molmil
Crystal structure of YhaJ effector binding domain
Descriptor: HTH-type transcriptional regulator YhaJ, SODIUM ION
Authors:Kim, M, Ryu, S.E.
Deposit date:2022-10-12
Release date:2023-10-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.639 Å)
Cite:Structural basis of transcription factor YhaJ for DNT detection.
Iscience, 26, 2023
8H5A
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BU of 8h5a by Molmil
Crystal structure of YhaJ effector binding domain (ligand-bound)
Descriptor: 2-methylbenzene-1,4-diol, HTH-type transcriptional regulator YhaJ, SODIUM ION
Authors:Kim, M, Ryu, S.E.
Deposit date:2022-10-12
Release date:2023-10-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Structural basis of transcription factor YhaJ for DNT detection.
Iscience, 26, 2023
4FJS
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Crystal structure of ureidoglycolate dehydrogenase enzyme in apo form
Descriptor: Ureidoglycolate dehydrogenase
Authors:Kim, M.I, Shin, I, Lee, J, Rhee, S.
Deposit date:2012-06-12
Release date:2013-01-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural and functional insights into (s)-ureidoglycolate dehydrogenase, a metabolic branch point enzyme in nitrogen utilization.
Plos One, 7, 2012
4WWX
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BU of 4wwx by Molmil
Crystal structure of the core RAG1/2 recombinase
Descriptor: V(D)J recombination-activating protein 1, V(D)J recombination-activating protein 2, ZINC ION
Authors:Kim, M.S, Lapkouski, M, Yang, W, Gellert, M.
Deposit date:2014-11-12
Release date:2015-02-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2001 Å)
Cite:Crystal structure of the V(D)J recombinase RAG1-RAG2.
Nature, 518, 2015
1GVI
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BU of 1gvi by Molmil
Thermus maltogenic amylase in complex with beta-CD
Descriptor: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), MALTOGENIC AMYLASE
Authors:Kim, M.-S, Kim, J.-I, Oh, B.-H.
Deposit date:2002-02-14
Release date:2002-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Cyclomaltodextrinase, Neopullulanase, and Maltogenic Amylase are Nearly Indistinguishable from Each Other
J.Biol.Chem., 277, 2002
2UZ0
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BU of 2uz0 by Molmil
The Crystal crystal structure of the estA protein, a virulence factor estA protein from Streptococcus pneumonia
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Kim, M.H, Kang, B.S, Kim, K.J, Oh, T.K.
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of the Esta Protein, a Virulence Factor from Streptococcus Pneumoniae.
Proteins, 70, 2008
8JCT
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BU of 8jct by Molmil
Crystal structure of fungal cutinase from Aspergillus fumigatiaffinis
Descriptor: Cutinase
Authors:Kim, M, Lee, S.H, Kim, K.-J.
Deposit date:2023-05-11
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization and engineering of novel fungal PET degrading enzyme from Aspergillus fumigatiaffinis
To Be Published
4TN5
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BU of 4tn5 by Molmil
Crystal Structure of Predicted Fructose Specific IIB from Escherichia Coli
Descriptor: Fructose-like phosphotransferase enzyme IIB component 3, NICKEL (II) ION
Authors:Kim, M.S, Shin, D.H.
Deposit date:2014-06-03
Release date:2015-06-10
Method:X-RAY DIFFRACTION (2.285 Å)
Cite:High-accuracy protein modeling and its application to molecular replacement of crystallographic phasing
To Be Published
2C0J
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BU of 2c0j by Molmil
Crystal structure of the bet3-trs33 heterodimer
Descriptor: PALMITIC ACID, R32611_2, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
Authors:Kim, M.-S, Yi, M.-J, Lee, K.-H, Wagner, J, Munger, C, Kim, Y.-G, Whiteway, M, Cygler, M, Oh, B.-H, Sacher, M.
Deposit date:2005-09-03
Release date:2006-02-07
Last modified:2015-01-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and Crystallographic Studies Reveal a Specific Interaction between Trapp Subunits Trs33P and Bet3P
Traffic, 6, 2005
2BR6
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BU of 2br6 by Molmil
Crystal Structure of Quorum-Quenching N-Acyl Homoserine Lactone Lactonase
Descriptor: AIIA-LIKE PROTEIN, GLYCEROL, HOMOSERINE LACTONE, ...
Authors:Kim, M.H, Choi, W.C, Kang, H.O, Kang, B.S, Kim, K.J, Derewenda, Z.S, Lee, J.K, Oh, T.K, Lee, C.H.
Deposit date:2005-05-03
Release date:2005-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Molecular Structure and Catalytic Mechanism of a Quorum-Quenching N-Acyl-L-Homoserine Lactone Hydrolase.
Proc.Natl.Acad.Sci.USA, 102, 2005
2BTN
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BU of 2btn by Molmil
Crystal Structure and Catalytic Mechanism of the Quorum-Quenching N- Acyl Homoserine Lactone Hydrolase
Descriptor: AIIA-LIKE PROTEIN, GLYCEROL, ZINC ION
Authors:Kim, M.H, Choi, W.C, Kang, H.O, Lee, J.S, Kang, B.S, Kim, K.J, Derewenda, Z.S, Oh, T.K, Lee, C.H, Lee, J.K.
Deposit date:2005-06-03
Release date:2005-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Molecular Structure and Catalytic Mechanism of a Quorum-Quenching N-Acyl-L-Homoserine Lactone Hydrolase.
Proc.Natl.Acad.Sci.USA, 102, 2005
5ZQH
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BU of 5zqh by Molmil
Crystal structure of Streptococcus transcriptional regulator
Descriptor: PadR family transcriptional regulator
Authors:Kim, M, Hong, M.
Deposit date:2018-04-19
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based functional analysis of a PadR transcription factor from Streptococcus pneumoniae and characteristic features in the PadR subfamily-2.
Biochem.Biophys.Res.Commun., 532, 2020
5K5U
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BU of 5k5u by Molmil
Crystal structure of N-terminal amidase
Descriptor: Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K63
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BU of 5k63 by Molmil
Crystal structure of N-terminal amidase C187S
Descriptor: ASPARAGINE, GLYCINE, Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K60
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BU of 5k60 by Molmil
Crystal structure of N-terminal amidase with Gln-Val peptide
Descriptor: GLUTAMINE, Nta1p, VALINE
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K62
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BU of 5k62 by Molmil
Crystal structure of N-terminal amidase C187S
Descriptor: ASPARAGINE, Nta1p, VALINE
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K66
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BU of 5k66 by Molmil
Crystal structure of N-terminal amidase with Asn-Glu peptide
Descriptor: ASPARAGINE, GLUTAMIC ACID, Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K61
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BU of 5k61 by Molmil
Crystal structure of N-terminal amidase with Gln-Gly peptide
Descriptor: GLUTAMINE, Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-04-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K5V
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Crystal structure of N-terminal amidase C187S
Descriptor: Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-04-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.947 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016

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