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PDB: 127 results

7N0H
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CryoEM structure of SARS-CoV-2 spike protein (S-6P, 2-up) in complex with sybodies (Sb45)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Jiang, J, Huang, R, Margulies, D.
Deposit date:2021-05-25
Release date:2021-06-02
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
7N0G
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CryoEm structure of SARS-CoV-2 spike protein (S-6P, 1-up) in complex with sybodies (Sb45)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Jiang, J, Huang, R, Margulies, D.
Deposit date:2021-05-25
Release date:2021-06-02
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
1DVK
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CRYSTAL STRUCTURE OF THE FUNCTIONAL DOMAIN OF THE SPLICING FACTOR PRP18
Descriptor: PRP18
Authors:Jiang, J, Horowitz, D.S, Xu, R.M.
Deposit date:2000-01-21
Release date:2000-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of the functional domain of the splicing factor Prp18.
Proc.Natl.Acad.Sci.USA, 97, 2000
5KD7
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BU of 5kd7 by Molmil
Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PV9) of HIV gp120 MN Isolate (IGPGRAFYV)
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Jiang, J, Natarajan, K, Margulies, D.
Deposit date:2016-06-07
Release date:2017-10-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Effects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity.
J. Immunol., 200, 2018
5KD4
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Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PVI10) of HIV gp120 MN Isolate (IGPGRAFYVI)
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-D alpha chain, ...
Authors:Jiang, J, Natarajan, K, Margulies, D.
Deposit date:2016-06-07
Release date:2017-10-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Effects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity.
J. Immunol., 200, 2018
7KGK
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Crystal structure of synthetic nanobody (Sb16) complexes with SARS-CoV-2 receptor binding domain
Descriptor: Sb16, Sybody-16, Synthetic Nanobody, ...
Authors:Jiang, J, Ahmad, J, Natarajan, K, Boyd, L.F, Margulies, D.H.
Deposit date:2020-10-16
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
7KLW
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BU of 7klw by Molmil
Crystal structure of synthetic nanobody (Sb45+Sb68) complexes with SARS-CoV-2 receptor binding domain
Descriptor: SB45, Synthetic Nanobody, SB68, ...
Authors:Jiang, J, Ahmad, J, Natarajan, K, Boyd, L.F, Margulies, D.H.
Deposit date:2020-11-01
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
7KGJ
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Crystal structure of synthetic nanobody (Sb45) complexes with SARS-CoV-2 receptor binding domain
Descriptor: Sb45, Sybody-45, Synthetic Nanobody, ...
Authors:Jiang, J, Ahmad, J, Natarajan, K, Boyd, L.F, Margulies, D.H.
Deposit date:2020-10-16
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
7MFV
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Crystal structure of synthetic nanobody (Sb16)
Descriptor: 1,2-ETHANEDIOL, Synthetic Nanobody #16 (Sb16)
Authors:Jiang, J, Ahmad, J, Natarajan, K, Boyd, L.F, Margulies, D.H.
Deposit date:2021-04-11
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
8TQ8
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BU of 8tq8 by Molmil
Crystal structure of Fab.34.5.8 in complex with MHC-I (H2-Dd)
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, Fab.34.5.8 Heavy chain, ...
Authors:Jiang, J, Boyd, L.F, Natarajan, K, Margulies, D.H.
Deposit date:2023-08-06
Release date:2024-03-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Experimental Structures of Antibody/MHC-I Complexes Reveal Details of Epitopes Overlooked by Computational Prediction.
J Immunol., 212, 2024
8TQ7
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BU of 8tq7 by Molmil
Crystal structure of Fab.34.2.12 in complex with MHC-I (H2-Dd)
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, Fab 34.2.12 Light Chain, ...
Authors:Jiang, J, Boyd, L.F, Natarajan, K, Margulies, D.H.
Deposit date:2023-08-06
Release date:2024-03-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Experimental Structures of Antibody/MHC-I Complexes Reveal Details of Epitopes Overlooked by Computational Prediction.
J Immunol., 212, 2024
8TQ9
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BU of 8tq9 by Molmil
Crystal structure of Fab.S19.8 in complex with MHC-I (H2-Dd)
Descriptor: Beta-2-microglobulin, Fab.S19.8 Heavy Chain, Fab.S19.8 Light Chain, ...
Authors:Jiang, J, Boyd, L.F, Natarajan, K, Margulies, D.H.
Deposit date:2023-08-06
Release date:2024-03-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Experimental Structures of Antibody/MHC-I Complexes Reveal Details of Epitopes Overlooked by Computational Prediction.
J Immunol., 212, 2024
8TQA
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BU of 8tqa by Molmil
Crystal structure of Fab.28.14.8 in complex with MHC-I (H2-Db)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
Authors:Jiang, J, Boyd, L.F, Natarajan, K, Margulies, D.H.
Deposit date:2023-08-06
Release date:2024-03-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Experimental Structures of Antibody/MHC-I Complexes Reveal Details of Epitopes Overlooked by Computational Prediction.
J Immunol., 212, 2024
2NSK
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BU of 2nsk by Molmil
Doubled Modified Selenium DNA
Descriptor: 5'-D(*GP*(UMS)P*GP*(T4S)P*AP*CP*AP*C)-3'
Authors:Jiang, J, Shen, J, Huang, Z.
Deposit date:2006-11-04
Release date:2006-11-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Double Modified Selinium DNA [G(Use)G(Tse)ACAC]
To be Published
2ESR
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BU of 2esr by Molmil
conserved hypothetical protein- streptococcus pyogenes
Descriptor: Methyltransferase, alpha-D-glucopyranose
Authors:Jiang, J, Min, T, Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-10-26
Release date:2006-02-07
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of hypothetical protein of Streptococcus Pygenes
To be Published
6D6V
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BU of 6d6v by Molmil
CryoEM structure of Tetrahymena telomerase with telomeric DNA at 4.8 Angstrom resolution
Descriptor: DNA (5'-D(P*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*G)-3'), RNA (159-MER), Telomerase associated protein p65, ...
Authors:Jiang, J, Wang, Y, Susac, L, Chan, H, Basu, R, Zhou, Z.H, Feigon, J.
Deposit date:2018-04-22
Release date:2018-05-30
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure of Telomerase with Telomeric DNA.
Cell, 173, 2018
2DLJ
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BU of 2dlj by Molmil
2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC
Descriptor: 5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3'
Authors:Jiang, J, Huang, Z.
Deposit date:2006-04-19
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Selenium derivatization of nucleic acids for crystallography.
Nucleic Acids Res., 35, 2007
3BM0
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BU of 3bm0 by Molmil
Structure of DNA Octamer G(dUSe)G(5-SedU)ACAC
Descriptor: 5'-D(*GP*(2'-Se-U)P*GP*(5-Se-U)P*AP*CP*AP*C)-3'
Authors:Jiang, J, SHeng, J, Hassan, A.E, Huang, Z.
Deposit date:2007-12-11
Release date:2008-06-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis and crystallographic analysis of 5-Se-thymidine DNAs.
Org.Lett., 11, 2009
1YUW
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BU of 1yuw by Molmil
crystal structure of bovine hsc70(aa1-554)E213A/D214A mutant
Descriptor: Heat shock cognate 71 kDa protein
Authors:Jiang, J, Lafer, E.M, Prasad, K, Sousa, R.
Deposit date:2005-02-14
Release date:2005-10-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of interdomain communication in the Hsc70 chaperone
Mol.Cell, 20, 2005
7MFU
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BU of 7mfu by Molmil
Crystal structure of synthetic nanobody (Sb14+Sb68) complexes with SARS-CoV-2 receptor binding domain
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Spike protein S1, ...
Authors:Jiang, J, Ahmad, J, Natarajan, K, Boyd, L.F, Margulies, D.H.
Deposit date:2021-04-11
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
5T7G
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BU of 5t7g by Molmil
Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PT9) of HIV gp120 MN Isolate (IGPGRAFYT)
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
Authors:Jiang, J, Natarajan, K, Margulies, D.
Deposit date:2016-09-04
Release date:2017-10-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:Effects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity.
J. Immunol., 200, 2018
2ABM
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BU of 2abm by Molmil
Crystal Structure of Aquaporin Z Tetramer Reveals both Open and Closed Water-conducting Channels
Descriptor: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-O-octyl-beta-D-glucopyranose, ...
Authors:Jiang, J, Daniels, B.V, Fu, D.
Deposit date:2005-07-15
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of AqpZ Tetramer Reveals Two Distinct Arg-189 Conformations Associated with Water Permeation through the Narrowest Constriction of the Water-conducting Channel.
J.Biol.Chem., 281, 2006
2QWQ
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BU of 2qwq by Molmil
Crystal structure of disulfide-bond-crosslinked complex of bovine hsc70 (1-394aa)R171C and bovine Auxilin (810-910aa)D876C in the AMPPNP hydrolyzed form
Descriptor: ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Jiang, J, Maes, E.G, Wang, L, Taylor, A.B, Hinck, A.P, Lafer, E.M, Sousa, R.
Deposit date:2007-08-10
Release date:2007-12-18
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural basis of J cochaperone binding and regulation of Hsp70.
Mol.Cell, 28, 2007
2QWL
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BU of 2qwl by Molmil
Crystal structure of bovine hsc70 (1-394aa)in the ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Heat shock cognate 71 kDa protein, ...
Authors:Jiang, J, Maes, E.G, Wang, L, Taylor, A.B, Hinck, A.P, Lafer, E.M, Sousa, R.
Deposit date:2007-08-10
Release date:2007-12-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of J cochaperone binding and regulation of Hsp70.
Mol.Cell, 28, 2007
2QW9
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Crystal structure of bovine hsc70 (1-394aa)in the apo state
Descriptor: GLYCEROL, Heat shock cognate 71 kDa protein
Authors:Jiang, J, Maes, E.G, Wang, L, Taylor, A.B, Hinck, A.P, Lafer, E.M, Sousa, R.
Deposit date:2007-08-10
Release date:2007-12-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis of J cochaperone binding and regulation of Hsp70.
Mol.Cell, 28, 2007

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