PDB Search results for query - Protein Data Bank Japan

PDB: 96 results

PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE IN COMPLEX WITH 3'-DEPHOSPHO-COA FROM ESCHERICHIA COLI
Descriptor:	DEPHOSPHO COENZYME A, PROTEIN (PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE), SULFATE ION
Authors:	Izard, T.
Deposit date:	1999-01-18
Release date:	2000-04-19
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	The crystal structure of a novel bacterial adenylyltransferase reveals half of sites reactivity. EMBO J., 18, 1999

1B5S

DIHYDROLIPOYL TRANSACETYLASE (E.C.2.3.1.12) CATALYTIC DOMAIN (RESIDUES 184-425) FROM BACILLUS STEAROTHERMOPHILUS
Descriptor:	DIHYDROLIPOAMIDE ACETYLTRANSFERASE
Authors:	Izard, T, Aevarsson, A, Allen, M.D, Westphal, A.H, Perham, R.N, De Kok, A, Hol, W.G.
Deposit date:	1999-01-10
Release date:	1999-02-16
Last modified:	2023-08-02
Method:	X-RAY DIFFRACTION (4.4 Å)
Cite:	Principles of quasi-equivalence and Euclidean geometry govern the assembly of cubic and dodecahedral cores of pyruvate dehydrogenase complexes. Proc.Natl.Acad.Sci.USA, 96, 1999

6U4K

Human talin2 residues 1-403
Descriptor:	Talin-2
Authors:	Izard, T, Rangarajan, E.S, Colgan, L, Yasuda, R, Chinthalapudi, K.
Deposit date:	2019-08-26
Release date:	2020-07-08
Last modified:	2020-09-23
Method:	X-RAY DIFFRACTION (2.555 Å)
Cite:	A distinct talin2 structure directs isoform specificity in cell adhesion. J.Biol.Chem., 295, 2020

4EHP

Crystal Structure of human vinculin head domain (residues 1-252) in complex with alpha-catenin (residues 277-382)
Descriptor:	ACETATE ION, Catenin alpha-1, Vinculin
Authors:	Izard, T, Rangarajan, E.S.
Deposit date:	2012-04-03
Release date:	2012-04-18
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (2.66 Å)
Cite:	alpha-Catenin unfurls upon binding to vinculin J.Biol.Chem., 287, 2012

4IGG

Full-length human alpha-catenin crystal structure
Descriptor:	Catenin alpha-1, PHOSPHATE ION
Authors:	Izard, T, Rangarajan, E.S.
Deposit date:	2012-12-17
Release date:	2012-12-26
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (3.66 Å)
Cite:	Dimer asymmetry defines alpha-catenin interactions. Nat.Struct.Mol.Biol., 20, 2013

6MFS

Mouse talin1 residues 1-138 fused to residues 169-400 in complex with phosphatidylinositol 4,5-bisphosphate (PIP2)
Descriptor:	PHOSPHATE ION, Talin-1 fusion, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:	Izard, T, Chinthalapudi, K, Rangarajan, E.S.
Deposit date:	2018-09-12
Release date:	2018-09-26
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.85 Å)
Cite:	The interaction of talin with the cell membrane is essential for integrin activation and focal adhesion formation. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

3MYI

Human metavinculin tail domain
Descriptor:	Vinculin
Authors:	Izard, T, Rangarajan, E.S.
Deposit date:	2010-05-10
Release date:	2010-05-26
Last modified:	2024-02-21
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	A helix replacement mechanism directs metavinculin functions. Plos One, 5, 2010

2GWW

Human vinculin (head domain, Vh1, residues 1-258) in complex with Shigella's IpaA vinculin binding site (residues 602-633)
Descriptor:	IpaA, vinculin
Authors:	Izard, T.
Deposit date:	2006-05-07
Release date:	2006-11-14
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.72 Å)
Cite:	Shigella applies molecular mimicry to subvert vinculin and invade host cells. J.Cell Biol., 175, 2006

2HSQ

Human vinculin (head domain, Vh1, residues 1-258) in complex with Shigella's IpaA vinculin binding site 2 (residues 565-587)
Descriptor:	Invasin ipaA, Vinculin
Authors:	Izard, T.
Deposit date:	2006-07-22
Release date:	2006-11-21
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (3.97 Å)
Cite:	Shigella applies molecular mimicry to subvert vinculin and invade host cells. J.Cell Biol., 175, 2006

2IBF

Human vinculin's head domain (Vh1, residues 1-258) in complex with two vinculin binding sites of Shigella flexneri's IpaA (residues 565-587)
Descriptor:	Invasin ipaA, Vinculin
Authors:	Izard, T.
Deposit date:	2006-09-11
Release date:	2007-09-18
Last modified:	2024-02-21
Method:	X-RAY DIFFRACTION (3.2 Å)
Cite:	Vinculin binding in its closed conformation by a helix addition mechanism. Embo J., 26, 2007

1GN8

PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE IN COMPLEX WITH Mn2+ATP FROM ESCHERICHIA COLI
Descriptor:	ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE, ...
Authors:	Izard, T.
Deposit date:	2001-10-03
Release date:	2002-01-17
Last modified:	2023-12-13
Method:	X-RAY DIFFRACTION (1.83 Å)
Cite:	The Crystal Structures of Phosphopantetheine Adenylyltransferase with Bound Substrates Reveal the Enzyme'S Catalytic Mechanism J.Mol.Biol., 315, 2001

1H1T

PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE IN COMPLEX WITH Coenzyme A FROM ESCHERICHIA COLI
Descriptor:	4'-PHOSPHOPANTETHEINE, COENZYME A, PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE, ...
Authors:	Izard, T.
Deposit date:	2002-07-21
Release date:	2003-07-07
Last modified:	2023-12-13
Method:	X-RAY DIFFRACTION (1.78 Å)
Cite:	A Novel Adenylate Binding Site Confers Phosphopantetheine Adenylyltransferase Interactions with Coenzyme A J.Bacteriol., 185, 2003

1SYQ

Human vinculin head domain VH1, residues 1-258, in complex with human talin's vinculin binding site 1, residues 607-636
Descriptor:	Talin 1, vinculin isoform VCL
Authors:	Izard, T, Vonrhein, C.
Deposit date:	2004-04-01
Release date:	2004-07-20
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.42 Å)
Cite:	Structural basis for amplifying vinculin activation by talin J.Biol.Chem., 279, 2004

1YDI

Human Vinculin Head Domain (VH1, 1-258) in Complex with Human Alpha-Actinin's Vinculin-Binding Site (Residues 731-760)
Descriptor:	Alpha-actinin 4, vinculin isoform VCL
Authors:	Izard, T.
Deposit date:	2004-12-23
Release date:	2005-07-19
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Structural Dynamics of {alpha}-Actinin-Vinculin Interactions. Mol.Cell.Biol., 14, 2005

7KTU

Cryogenic electron microscopy model of full-length human metavinculin H1'-parallel conformation 1
Descriptor:	metavinculin
Authors:	Izard, T, Rangarajan, E.S.
Deposit date:	2020-11-24
Release date:	2021-01-27
Last modified:	2024-03-06
Method:	ELECTRON MICROSCOPY (4.15 Å)
Cite:	The Cryogenic Electron Microscopy Structure of the Cell Adhesion Regulator Metavinculin Reveals an Isoform-Specific Kinked Helix in Its Cytoskeleton Binding Domain. Int J Mol Sci, 22, 2021

7KTV

Cryogenic electron microscopy model of full-length human metavinculin H1' kinked conformation
Descriptor:	metavinculin
Authors:	Izard, T, Rangarajan, E.S.
Deposit date:	2020-11-24
Release date:	2021-01-27
Last modified:	2024-03-06
Method:	ELECTRON MICROSCOPY (4.5 Å)
Cite:	The Cryogenic Electron Microscopy Structure of the Cell Adhesion Regulator Metavinculin Reveals an Isoform-Specific Kinked Helix in Its Cytoskeleton Binding Domain. Int J Mol Sci, 22, 2021

7KTT

Cryogenic electron microscopy model of full-length human metavinculin
Descriptor:	metavinculin
Authors:	Izard, T, Rangarajan, E.S.
Deposit date:	2020-11-24
Release date:	2021-01-27
Last modified:	2024-03-06
Method:	ELECTRON MICROSCOPY (4.17 Å)
Cite:	The Cryogenic Electron Microscopy Structure of the Cell Adhesion Regulator Metavinculin Reveals an Isoform-Specific Kinked Helix in Its Cytoskeleton Binding Domain. Int J Mol Sci, 22, 2021

7KTW

Cryogenic electron microscopy model of full-length human metavinculin H1'-parallel conformation 2
Descriptor:	metavinculin
Authors:	Izard, T, Rangarajan, E.S.
Deposit date:	2020-11-24
Release date:	2021-01-27
Last modified:	2024-03-06
Method:	ELECTRON MICROSCOPY (4.27 Å)
Cite:	The Cryogenic Electron Microscopy Structure of the Cell Adhesion Regulator Metavinculin Reveals an Isoform-Specific Kinked Helix in Its Cytoskeleton Binding Domain. Int J Mol Sci, 22, 2021

1NAL

THE THREE-DIMENSIONAL STRUCTURE OF N-ACETYLNEURAMINATE LYASE FROM ESCHERICHIA COLI
Descriptor:	N-ACETYLNEURAMINATE LYASE, SULFATE ION
Authors:	Izard, T, Lawrence, M.C, Malby, R.L, Lilley, G.G, Colman, P.M.
Deposit date:	1994-02-28
Release date:	1995-09-15
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	The three-dimensional structure of N-acetylneuraminate lyase from Escherichia coli. Structure, 2, 1994

1QHX

CHLORAMPHENICOL PHOSPHOTRANSFERASE IN COMPLEX WITH ATP FROM STREPTOMYCES VENEZUELAE
Descriptor:	ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PROTEIN (CHLORAMPHENICOL PHOSPHOTRANSFERASE)
Authors:	Izard, T.
Deposit date:	1999-05-31
Release date:	2000-06-01
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	The Crystal Structures of Chloramphenicol Phosphotransferase Reveal a Novel Inactivation Mechanism Embo J., 19, 2000

1QJC

Phosphopantetheine Adenylyltransferase from Escherichia coli in complex with 4'-phosphopantetheine
Descriptor:	4'-PHOSPHOPANTETHEINE, PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE, SULFATE ION
Authors:	Izard, T.
Deposit date:	1999-06-23
Release date:	2001-06-27
Last modified:	2023-12-13
Method:	X-RAY DIFFRACTION (1.63 Å)
Cite:	The Crystal Structures of Phosphopantetheine Adenylyltransferase with Bound Substrates Reveal the Enzyme'S Catalytic Mechanism J.Mol.Biol., 315, 2001

1QHN

CHLORAMPHENICOL PHOSPHOTRANSFERASE FROM STREPTOMYCES VENEZUELAE
Descriptor:	CHLORAMPHENICOL PHOSPHOTRANSFERASE, SULFATE ION
Authors:	Izard, T.
Deposit date:	1999-05-23
Release date:	2000-06-07
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	The Crystal Structures of Chloramphenicol Phosphotransferase Reveal a Novel Inactivation Mechanism Embo J., 19, 2000

1QHS

CHLORAMPHENICOL PHOSPHOTRANSFERASE IN COMPLEX WITH CHLORAMPHENICOL FROM STREPTOMYCES VENEZUELAE
Descriptor:	CHLORAMPHENICOL, PROTEIN (CHLORAMPHENICOL PHOSPHOTRANSFERASE), SULFATE ION
Authors:	Izard, T.
Deposit date:	1999-05-28
Release date:	2000-06-01
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	The Crystal Structures of Chloramphenicol Phosphotransferase Reveal a Novel Inactivation Mechanism Embo J., 19, 2000

1QHY

CHLORAMPHENICOL PHOSPHOTRANSFERASE FROM STREPTOMYCES VENEZUELAE IN COMPLEX WITH ATPGAMMAS AND CHLORAMPHENICOL
Descriptor:	CHLORAMPHENICOL, CHLORAMPHENICOL PHOSPHOTRANSFERASE, MAGNESIUM ION, ...
Authors:	Izard, T.
Deposit date:	1999-06-01
Release date:	2000-06-07
Last modified:	2023-08-02
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	The Crystal Structures of Chloramphenicol Phosphotransferase Reveal a Novel Inactivation Mechanism Embo J., 19, 2000

1RKC

Human vinculin head (1-258) in complex with talin's vinculin binding site 3 (residues 1944-1969)
Descriptor:	Talin, Vinculin
Authors:	Izard, T, Evans, G, Borgon, R.A, Rush, C.L, Bricogne, G, Bois, P.R.
Deposit date:	2003-11-21
Release date:	2004-01-13
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Vinculin activation by talin through helical bundle conversion Nature, 427, 2004

12 3 4 >

Total results:	96
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Izard, T."