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PDB: 69 results

8C1V
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BU of 8c1v by Molmil
SARS-CoV-2 S-trimer (3 RBDs up) bound to TriSb92, fitted into cryo-EM map
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sb92, ...
Authors:Huiskonen, J.T, Rissanen, I, Hannula, L.
Deposit date:2022-12-21
Release date:2023-04-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Intranasal trimeric sherpabody inhibits SARS-CoV-2 including recent immunoevasive Omicron subvariants.
Nat Commun, 14, 2023
5OXE
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BU of 5oxe by Molmil
Structure of major capsid protein VP1 of Aeropyrum pernix bacilliform virus 1 APBV1
Descriptor: Major virion protein
Authors:Huiskonen, J.T, Ptchelkine, D, Phillpps, S.E.V.
Deposit date:2017-09-06
Release date:2017-11-22
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Unique architecture of thermophilic archaeal virus APBV1 and its genome packaging.
Nat Commun, 8, 2017
7NVL
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BU of 7nvl by Molmil
Human TRiC complex in closed state with nanobody bound (Consensus Map)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Kelly, J.J, Chi, G, Bulawa, C, Paavilainen, V.O, Bountra, C, Huiskonen, J.T, Yue, W, Structural Genomics Consortium (SGC)
Deposit date:2021-03-15
Release date:2022-03-02
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Snapshots of actin and tubulin folding inside the TRiC chaperonin.
Nat.Struct.Mol.Biol., 29, 2022
7NVM
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BU of 7nvm by Molmil
Human TRiC complex in closed state with nanobody Nb18, actin and PhLP2A bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Actin, ...
Authors:Kelly, J.J, Chi, G, Bulawa, C, Paavilainen, V.O, Bountra, C, Huiskonen, J.T, Yue, W, Structural Genomics Consortium (SGC)
Deposit date:2021-03-15
Release date:2022-03-02
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Snapshots of actin and tubulin folding inside the TRiC chaperonin.
Nat.Struct.Mol.Biol., 29, 2022
7NVO
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BU of 7nvo by Molmil
Human TRiC complex in open state with nanobody bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Kelly, J.J, Chi, G, Bulawa, C, Paavilainen, V.O, Bountra, C, Huiskonen, J.T, Yue, W.
Deposit date:2021-03-15
Release date:2022-03-02
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Snapshots of actin and tubulin folding inside the TRiC chaperonin.
Nat.Struct.Mol.Biol., 29, 2022
7NVN
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Human TRiC complex in closed state with nanobody and tubulin bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Kelly, J.J, Chi, G, Bulawa, C, Paavilainen, V.O, Bountra, C, Huiskonen, J.T, Yue, W.
Deposit date:2021-03-15
Release date:2022-03-02
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Snapshots of actin and tubulin folding inside the TRiC chaperonin.
Nat.Struct.Mol.Biol., 29, 2022
8BF9
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BU of 8bf9 by Molmil
Molecular view of ER membrane remodeling by the Sec61/TRAP translocon.
Descriptor: 60S ribosomal protein L39, Large ribosomal subunit protein eL31, Large ribosomal subunit protein eL38, ...
Authors:Karki, S, Javanainen, M, Tranter, D, Rehan, S, Huiskonen, J, Happonen, L, Paavilainen, V.
Deposit date:2022-10-24
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Molecular view of ER membrane remodeling by the Sec61/TRAP translocon.
Embo Rep., 24, 2023
6R7X
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BU of 6r7x by Molmil
CryoEM structure of calcium-bound human TMEM16K / Anoctamin 10 in detergent (2mM Ca2+, closed form)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Anoctamin-10, CALCIUM ION, ...
Authors:Pike, A.C.W, Bushell, S.R, Shintre, C.A, Tessitore, A, Baronina, A, Chu, A, Mukhopadhyay, S, Shrestha, L, Chalk, R, Burgess-Brown, N.A, Love, J, Huiskonen, J.T, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2019-03-29
Release date:2019-05-01
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:The structural basis of lipid scrambling and inactivation in the endoplasmic reticulum scramblase TMEM16K.
Nat Commun, 10, 2019
6R7Y
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BU of 6r7y by Molmil
CryoEM structure of calcium-bound human TMEM16K / Anoctamin 10 in detergent (low Ca2+, closed form)
Descriptor: Anoctamin-10, CALCIUM ION
Authors:Pike, A.C.W, Bushell, S.R, Shintre, C.A, Tessitore, A, Chu, A, Mukhopadhyay, S, Shrestha, L, Chalk, R, Burgess-Brown, N.A, Love, J, Huiskonen, J.T, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2019-03-29
Release date:2019-05-01
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The structural basis of lipid scrambling and inactivation in the endoplasmic reticulum scramblase TMEM16K.
Nat Commun, 10, 2019
6R7Z
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BU of 6r7z by Molmil
CryoEM structure of calcium-free human TMEM16K / Anoctamin 10 in detergent (closed form)
Descriptor: Anoctamin-10
Authors:Pike, A.C.W, Bushell, S.R, Shintre, C.A, Tessitore, A, Chu, A, Mukhopadhyay, S, Shrestha, L, Chalk, R, Burgess-Brown, N.A, Love, J, Huiskonen, J.T, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2019-03-29
Release date:2019-05-01
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (5.14 Å)
Cite:The structural basis of lipid scrambling and inactivation in the endoplasmic reticulum scramblase TMEM16K.
Nat Commun, 10, 2019
5FXU
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BU of 5fxu by Molmil
Crystal Structure of Puumala virus Gn glycoprotein ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE POLYPROTEIN, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, S, Rissanen, I, Zeltina, A, Hepojoki, J, Raghwani, J, Harlos, K, Pybus, O.G, Huiskonen, J.T, Bowden, T.A.
Deposit date:2016-03-02
Release date:2016-05-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:A Molecular-Level Account of the Antigenic Hantaviral Surface.
Cell Rep., 15, 2016
5FVC
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BU of 5fvc by Molmil
Structure of RNA-bound decameric HMPV nucleoprotein
Descriptor: HMPV NUCLEOPROTEIN, RNA
Authors:Renner, M, Bertinelli, M, Leyrat, C, Paesen, G.C, Saraiva de Oliveira, L.F, Huiskonen, J.T, Grimes, J.M.
Deposit date:2016-02-05
Release date:2016-02-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (4.17 Å)
Cite:Nucleocapsid assembly in pneumoviruses is regulated by conformational switching of the N protein.
Elife, 5, 2016
1GW8
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BU of 1gw8 by Molmil
quasi-atomic resolution model of bacteriophage PRD1 sus607 mutant, obtained by combined cryo-EM and X-ray crystallography.
Descriptor: MAJOR CAPSID PROTEIN
Authors:San Martin, C, Huiskonen, J, Bamford, J.K.H, Butcher, S.J, Fuller, S.D, Bamford, D.H, Burnett, R.M.
Deposit date:2002-03-08
Release date:2002-03-15
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (13.3 Å)
Cite:Minor Proteins, Mobile Arms and Membrane-Capsid Interactions in the Bacteriophage Prd1 Capsid.
Nat.Struct.Biol., 9, 2002
5OPG
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BU of 5opg by Molmil
Structure of the Hantaan virus Gn glycoprotein ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SULFATE ION, ...
Authors:Rissanen, I, Stass, R, Zeltina, A, Li, S, Hepojoki, J, Harlos, K, Gilbert, R.J.C, Huiskonen, J.T, Bowden, T.A.
Deposit date:2017-08-09
Release date:2017-08-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Transitions of the Conserved and Metastable Hantaviral Glycoprotein Envelope.
J. Virol., 91, 2017
5FT2
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BU of 5ft2 by Molmil
Sub-tomogram averaging of Lassa virus glycoprotein spike from virus- like particles at pH 5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PRE-GLYCOPROTEIN POLYPROTEIN GP COMPLEX
Authors:Li, S, Zhaoyang, S, Pryce, R, Parsy, M.L, Fehling, S.K, Schlie, K, Siebert, C.A, Garten, W, Bowden, T.A, Strecker, T, Huiskonen, J.T.
Deposit date:2016-01-09
Release date:2016-03-02
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (16.4 Å)
Cite:Acidic Ph-Induced Conformations and Lamp1 Binding of the Lassa Virus Glycoprotein Spike.
Plos Pathog., 12, 2016
5K47
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BU of 5k47 by Molmil
CryoEM structure of the human Polycystin-2/PKD2 TRP channel
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Polycystin-2
Authors:Pike, A.C.W, Grieben, M, Shintre, C.A, Tessitore, A, Shrestha, L, Mukhopadhyay, S, Mahajan, P, Chalk, R, Burgess-Brown, N.A, Huiskonen, J.T, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2016-05-20
Release date:2016-08-24
Last modified:2020-10-21
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of the polycystic kidney disease TRP channel Polycystin-2 (PC2).
Nat. Struct. Mol. Biol., 24, 2017
7B0A
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BU of 7b0a by Molmil
Puumala virus-like particle glycoprotein spike and lattice contacts model.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein, ...
Authors:Rissanen, I, Stass, R, Huiskonen, J.T, Bowden, T.A.
Deposit date:2020-11-19
Release date:2020-12-16
Last modified:2021-01-13
Method:ELECTRON MICROSCOPY (13.9 Å)
Cite:Molecular rationale for antibody-mediated targeting of the hantavirus fusion glycoprotein.
Elife, 9, 2020
1GW7
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BU of 1gw7 by Molmil
QUASI-ATOMIC RESOLUTION MODEL OF BACTERIOPHAGE PRD1 CAPSID, OBTAINED BY COMBINED CRYO-EM AND X-RAY CRYSTALLOGRAPHY.
Descriptor: MAJOR CAPSID PROTEIN
Authors:San Martin, C, Huiskonen, J, Bamford, J.K.H, Butcher, S.J, Fuller, S.D, Bamford, D.H, Burnett, R.M.
Deposit date:2002-03-08
Release date:2002-03-13
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Minor Proteins, Mobile Arms, and Membrane-Capsid Interactions in Bacteriophage Prd1 Capsid Assembly
Nat.Struct.Biol., 9, 2002
8P0V
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BU of 8p0v by Molmil
Structure of the human Commander complex coiled coils, DENND10 and partial Retriever subcomplex
Descriptor: Coiled-coil domain-containing protein 22, Coiled-coil domain-containing protein 93, DENN domain-containing protein 10, ...
Authors:Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
Deposit date:2023-05-10
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 2024
7B09
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BU of 7b09 by Molmil
Puumala virus glycoprotein (Gc) in complex with fab fragment P-4G2.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein, ...
Authors:Rissanen, I, Stass, R, Huiskonen, J.T, Bowden, T.A.
Deposit date:2020-11-19
Release date:2020-12-16
Last modified:2021-01-13
Method:ELECTRON MICROSCOPY (13.4 Å)
Cite:Molecular rationale for antibody-mediated targeting of the hantavirus fusion glycoprotein.
Elife, 9, 2020
5FJ6
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Structure of the P2 polymerase inside in vitro assembled bacteriophage phi6 polymerase complex
Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Ilca, S, Kotecha, A, Sun, X, Poranen, M.P, Stuart, D.I, Huiskonen, J.T.
Deposit date:2015-10-06
Release date:2015-11-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Localized Reconstruction of Subunits from Electron Cryomicroscopy Images of Macromolecular Complexes.
Nat.Commun., 6, 2015
5FJ7
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BU of 5fj7 by Molmil
Structure of the P2 polymerase inside in vitro assembled bacteriophage phi6 polymerase complex, with P1 included
Descriptor: MAJOR INNER PROTEIN P1, MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Ilca, S, Kotecha, A, Sun, X, Poranen, M.P, Stuart, D.I, Huiskonen, J.T.
Deposit date:2015-10-06
Release date:2015-11-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Localized Reconstruction of Subunits from Electron Cryomicroscopy Images of Macromolecular Complexes.
Nat.Commun., 6, 2015
5FJ5
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BU of 5fj5 by Molmil
Structure of the in vitro assembled bacteriophage phi6 polymerase complex
Descriptor: MAJOR INNER PROTEIN P1
Authors:Ilca, S, Kotecha, A, Sun, X, Poranen, M.P, Stuart, D.I, Huiskonen, J.T.
Deposit date:2015-10-06
Release date:2015-11-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Localized Reconstruction of Subunits from Electron Cryomicroscopy Images of Macromolecular Complexes.
Nat.Commun., 6, 2015
7Q8S
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BU of 7q8s by Molmil
Leishmania major ADP-actin filament decorated with Leishmania major cofilin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADF/Cofilin, Actin, ...
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
8P0W
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BU of 8p0w by Molmil
Structure of the human Commander complex COMMD ring
Descriptor: COMM domain-containing protein 1, COMM domain-containing protein 10, COMM domain-containing protein 2, ...
Authors:Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
Deposit date:2023-05-11
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 2024

 

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