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PDB: 108 results

1ZSZ
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Crystal structure of a computationally designed SspB heterodimer
Descriptor: MAGNESIUM ION, Stringent starvation protein B homolog
Authors:Bolon, D.N, Grant, R.A, Baker, T.A, Sauer, R.T.
Deposit date:2005-05-25
Release date:2005-08-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Specificity versus stability in computational protein design.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1F2I
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BU of 1f2i by Molmil
COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA
Descriptor: 5'-D(*AP*TP*GP*GP*GP*CP*GP*CP*GP*CP*CP*CP*AP*T)-3', FUSION OF N-TERMINAL 17-MER PEPTIDE EXTENSION TO ZIF12, ZINC ION
Authors:Wang, B.S, Grant, R.A, Pabo, C.O.
Deposit date:2000-05-25
Release date:2001-09-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Selected peptide extension contacts hydrophobic patch on neighboring zinc finger and mediates dimerization on DNA.
Nat.Struct.Biol., 8, 2001
1G2F
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BU of 1g2f by Molmil
STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (TATAZF;CLONE #6)
Descriptor: 5'-D(*GP*AP*CP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*AP*G)-3', 5'-D(*TP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*GP*TP*CP*C)-3', TATA BOX ZINC FINGER PROTEIN, ...
Authors:Wolfe, S.A, Grant, R.A, Elrod-Erickson, M, Pabo, C.O.
Deposit date:2000-10-18
Release date:2001-09-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Beyond the "recognition code": structures of two Cys2His2 zinc finger/TATA box complexes.
Structure, 9, 2001
4YJM
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BU of 4yjm by Molmil
The apo structure of Agrobacterium tumefaciens ClpS2
Descriptor: ATP-dependent Clp protease adapter protein ClpS 2
Authors:Stein, B, Grant, R.A, Sauer, R.T, Baker, T.A.
Deposit date:2015-03-03
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Structural Basis of an N-Degron Adaptor with More Stringent Specificity.
Structure, 24, 2016
4YKA
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The structure of Agrobacterium tumefaciens ClpS2 in complex with L-tyrosinamide
Descriptor: ATP-dependent Clp protease adapter protein ClpS 2, L-TYROSINAMIDE, SULFATE ION
Authors:Stein, B, Grant, R.A, Sauer, R.T, Baker, T.A.
Deposit date:2015-03-04
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Structural Basis of an N-Degron Adaptor with More Stringent Specificity.
Structure, 24, 2016
4YJX
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BU of 4yjx by Molmil
The structure of Agrobacterium tumefaciens ClpS2 bound to L-phenylalaninamide
Descriptor: ATP-dependent Clp protease adapter protein ClpS 2, PHENYLALANINE AMIDE, SULFATE ION
Authors:Stein, B, Grant, R.A, Sauer, R.T, Baker, T.A.
Deposit date:2015-03-03
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.547 Å)
Cite:Structural Basis of an N-Degron Adaptor with More Stringent Specificity.
Structure, 24, 2016
6X0A
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BU of 6x0a by Molmil
X-ray structure of a chimeric ParDE toxin-antitoxin complex from Mesorhizobium opportunistum
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Plasmid stabilization system, Putative addiction module antidote protein, ...
Authors:Lite, T.L, Grant, R.A, Laub, M.T.
Deposit date:2020-05-15
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Uncovering the basis of protein-protein interaction specificity with a combinatorially complete library.
Elife, 9, 2020
1LLM
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BU of 1llm by Molmil
Crystal Structure of a Zif23-GCN4 Chimera Bound to DNA
Descriptor: 5'-D(*TP*CP*CP*CP*AP*CP*GP*CP*GP*TP*GP*GP*G)-3', ZINC ION, chimera of Zif23-GCN4
Authors:Wolfe, S.A, Grant, R.A, Pabo, C.O.
Deposit date:2002-04-29
Release date:2003-09-30
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a designed dimeric zinc finger protein bound to DNA.
Biochemistry, 42, 2003
1OU8
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structure of an AAA+ protease delivery protein in complex with a peptide degradation tag
Descriptor: MAGNESIUM ION, Stringent starvation protein B homolog, synthetic ssrA peptide
Authors:Levchenko, I, Grant, R.A, Wah, D.A, Sauer, R.T, Baker, T.A.
Deposit date:2003-03-24
Release date:2003-09-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of a delivery protein for an AAA+ protease in complex with a peptide degradation tag
Mol.Cell, 12, 2003
2PQK
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BU of 2pqk by Molmil
X-ray crystal structure of human Mcl-1 in complex with Bim BH3
Descriptor: Bim BH3 peptide, Induced myeloid leukemia cell differentiation protein Mcl-1, SODIUM ION, ...
Authors:Bare, E, Grant, R.A, Keating, A.E.
Deposit date:2007-05-02
Release date:2007-06-19
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mcl-1-Bim complexes accommodate surprising point mutations via minor structural changes.
Protein Sci., 19, 2010
2QAZ
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BU of 2qaz by Molmil
Structure of C. crescentus SspB ortholog
Descriptor: SspB Protein
Authors:Chien, P, Grant, R.A, Sauer, R.T, Baker, T.A.
Deposit date:2007-06-15
Release date:2007-09-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of C. crescentus SspB ortholog
To be Published
2QF3
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BU of 2qf3 by Molmil
Structure of the delta PDZ truncation of the DegS protease
Descriptor: PHOSPHATE ION, Protease degS
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2007-06-26
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Allosteric activation of DegS, a stress sensor PDZ protease.
Cell(Cambridge,Mass.), 131, 2007
2QAS
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BU of 2qas by Molmil
Crystal structure of Caulobacter crescentus SspB ortholog
Descriptor: C. crescentus ssrA peptide, Hypothetical protein
Authors:Chien, P, Grant, R.A, Sauer, R.T, Baker, T.A.
Deposit date:2007-06-15
Release date:2007-09-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of Caulobacter crescentus SspB ortholog
To be Published
2QF0
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BU of 2qf0 by Molmil
Structure of the delta PDZ truncation of the DegS protease
Descriptor: Protease degS
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2007-06-26
Release date:2007-12-11
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Allosteric activation of DegS, a stress sensor PDZ protease.
Cell(Cambridge,Mass.), 131, 2007
2QGR
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BU of 2qgr by Molmil
Structure of the R178A mutant of delta PDZ DegS protease
Descriptor: Protease degS
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2007-06-29
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Allosteric activation of DegS, a stress sensor PDZ protease.
Cell(Cambridge,Mass.), 131, 2007
2RCE
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BU of 2rce by Molmil
DFP modified DegS delta PDZ
Descriptor: Protease degS
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2007-09-19
Release date:2007-12-11
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:DFP modified DegS delta PDZ
To be Published
3O2B
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BU of 3o2b by Molmil
E. coli ClpS in complex with a Phe N-end rule peptide
Descriptor: ATP-dependent Clp protease adaptor protein ClpS, CHLORIDE ION, Phe N-end rule peptide, ...
Authors:Roman-Hernandez, G, Grant, R.A, Sauer, R.T, Baker, T.A, de Regt, A.
Deposit date:2010-07-22
Release date:2011-12-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The ClpS adaptor mediates staged delivery of N-end rule substrates to the AAA+ ClpAP protease.
Mol.Cell, 43, 2011
1OU9
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BU of 1ou9 by Molmil
Structure of SspB, a AAA+ protease delivery protein
Descriptor: CALCIUM ION, Stringent starvation protein B homolog
Authors:Levchenko, I, Grant, R.A, Wah, D.A, Sauer, R.T, Baker, T.A.
Deposit date:2003-03-24
Release date:2003-09-23
Last modified:2014-04-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a delivery protein for an AAA+ protease in complex with a peptide degradation tag
Mol.Cell, 12, 2003
1OUL
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BU of 1oul by Molmil
Structure of the AAA+ protease delivery protein SspB
Descriptor: Stringent starvation protein B homolog
Authors:Levchenko, I, Grant, R.A, Wah, D.A, Sauer, R.T, Baker, T.A.
Deposit date:2003-03-24
Release date:2003-09-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a delivery protein for an AAA+ protease in complex with a peptide degradation tag
Mol.Cell, 12, 2003
3O2H
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BU of 3o2h by Molmil
E. coli ClpS in complex with a Leu N-end rule peptide
Descriptor: ATP-dependent Clp protease adaptor protein ClpS, DNA protection during starvation protein
Authors:Roman-Hernandez, G, Grant, R.A, Sauer, R.T, Baker, T.A, de Regt, A.
Deposit date:2010-07-22
Release date:2011-12-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The ClpS adaptor mediates staged delivery of N-end rule substrates to the AAA+ ClpAP protease.
Mol.Cell, 43, 2011
3O2O
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BU of 3o2o by Molmil
Structure of E. coli ClpS ring complex
Descriptor: ATP-dependent Clp protease adaptor protein ClpS
Authors:Roman-Hernandez, G, Grant, R.A, Sauer, R.T, Baker, T.A, de Regt, A.
Deposit date:2010-07-22
Release date:2011-12-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The ClpS adaptor mediates staged delivery of N-end rule substrates to the AAA+ ClpAP protease.
Mol.Cell, 43, 2011
3OTP
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BU of 3otp by Molmil
Crystal structure of the DegP dodecamer with a model substrate
Descriptor: Lysozyme C, Protease do
Authors:Kim, S, Grant, R.A, Sauer, R.T.
Deposit date:2010-09-13
Release date:2011-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.76 Å)
Cite:Covalent Linkage of Distinct Substrate Degrons Controls Assembly and Disassembly of DegP Proteolytic Cages.
Cell(Cambridge,Mass.), 145, 2011
3OU0
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BU of 3ou0 by Molmil
re-refined 3CS0
Descriptor: Periplasmic serine endoprotease DegP, heptapeptide, pentapeptide
Authors:Sauer, R.T, Grant, R.A, Kim, S.
Deposit date:2010-09-14
Release date:2011-01-19
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Covalent Linkage of Distinct Substrate Degrons Controls Assembly and Disassembly of DegP Proteolytic Cages.
Cell(Cambridge,Mass.), 145, 2011
1TWB
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BU of 1twb by Molmil
SspB disulfide crosslinked to an ssrA degradation tag
Descriptor: Stringent starvation protein B homolog, ssrA peptide
Authors:Bolon, D.N, Grant, R.A, Baker, T.A, Sauer, R.T.
Deposit date:2004-06-30
Release date:2004-11-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Nucleotide-Dependent Substrate Handoff from the SspB Adaptor to the AAA+ ClpXP Protease.
Mol.Cell, 16, 2004
1U9P
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BU of 1u9p by Molmil
Permuted single-chain Arc
Descriptor: pArc
Authors:Tabtiang, R.K, Cezairliyan, B.O, Grant, R.A, Cochrane, J.C, Sauer, R.T.
Deposit date:2004-08-10
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Consolidating critical binding determinants by noncyclic rearrangement of protein secondary structure
Proc.Natl.Acad.Sci.Usa, 102, 2005

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