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PDB: 163 results

1G9L
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SOLUTION STRUCTURE OF THE PABC DOMAIN OF HUMAN POLY(A) BINDING PROTEIN
Descriptor: POLYADENYLATE-BINDING PROTEIN 1
Authors:Kozlov, G, Trempe, J.-F, Khaleghpour, K, Kahvejian, A, Ekiel, I, Gehring, K.
Deposit date:2000-11-24
Release date:2001-03-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and function of the C-terminal PABC domain of human poly(A)-binding protein.
Proc.Natl.Acad.Sci.USA, 98, 2001
1GH9
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BU of 1gh9 by Molmil
SOLUTION STRUCTURE OF A 8.3 KDA PROTEIN (GENE MTH1184) FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
Descriptor: 8.3 KDA PROTEIN (GENE MTH1184)
Authors:Kozlov, G, Ekiel, I, Gehring, K, Northeast Structural Genomics Consortium (NESG)
Deposit date:2000-11-30
Release date:2000-12-11
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural proteomics of an archaeon.
Nat.Struct.Biol., 7, 2000
3KTR
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Structural basis of ataxin-2 recognition by poly(A)-binding protein
Descriptor: Ataxin-2, CADMIUM ION, Polyadenylate-binding protein 1, ...
Authors:Kozlov, G, Gehring, K.
Deposit date:2009-11-25
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of binding of P-body-associated proteins GW182 and ataxin-2 by the Mlle domain of poly(A)-binding protein.
J.Biol.Chem., 285, 2010
3KTP
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Structural basis of GW182 recognition by poly(A)-binding protein
Descriptor: Polyadenylate-binding protein 1, Trinucleotide repeat-containing gene 6C protein
Authors:Kozlov, G, Gehring, K.
Deposit date:2009-11-25
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis of binding of P-body-associated proteins GW182 and ataxin-2 by the Mlle domain of poly(A)-binding protein.
J.Biol.Chem., 285, 2010
3KUT
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Crystal structure of the MLLE domain of poly(A)-binding protein in complex with the binding region of Paip2
Descriptor: CHLORIDE ION, PAIP2 protein, Polyadenylate-binding protein 1
Authors:Kozlov, G, Gehring, K.
Deposit date:2009-11-27
Release date:2010-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular Determinants of PAM2 Recognition by the MLLE Domain of Poly(A)-Binding Protein.
J.Mol.Biol., 397, 2010
3KUJ
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Crystal structure of C-terminal domain of PABPC1 in complex with binding region of eRF3a
Descriptor: GSPT1 protein, Polyadenylate-binding protein 1, SULFATE ION
Authors:Kozlov, G, Gehring, K.
Deposit date:2009-11-27
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular basis of eRF3 recognition by the MLLE domain of poly(A)-binding protein.
Plos One, 5, 2010
3KUS
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Crystal structure of the MLLE domain of poly(A)-binding protein in complex with the binding region of Paip2
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, PAIP2 protein, ...
Authors:Kozlov, G, Gehring, K.
Deposit date:2009-11-27
Release date:2010-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular Determinants of PAM2 Recognition by the MLLE Domain of Poly(A)-Binding Protein.
J.Mol.Biol., 397, 2010
3KUI
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Crystal structure of C-terminal domain of PABPC1 in complex with binding region of eRF3a
Descriptor: GSPT1 protein, Polyadenylate-binding protein 1, SULFATE ION, ...
Authors:Kozlov, G, Gehring, K.
Deposit date:2009-11-27
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis of eRF3 recognition by the MLLE domain of poly(A)-binding protein.
Plos One, 5, 2010
1RWU
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Solution structure of conserved protein YbeD from E. coli
Descriptor: Hypothetical UPF0250 protein ybeD
Authors:Kozlov, G, Arrowsmith, C.H, Gehring, K, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-12-17
Release date:2004-12-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural similarity of YbeD protein from Escherichia coli to allosteric regulatory domains
J.Bacteriol., 186, 2004
1RYJ
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Solution NMR Structure of Protein Mth1743 from Methanobacterium thermoautotrophicum. Ontario Centre for Structural Proteomics target MTH1743_1_70; Northeast Structural Genomics Consortium Target TT526.
Descriptor: unknown
Authors:Yee, A, Chang, X, Pineda-Lucena, A, Wu, B, Semesi, A, Le, B, Ramelot, T, Lee, G.M, Bhattacharyya, S, Gutierrez, P, Denisov, A, Lee, C.H, Cort, J.R, Kozlov, G, Liao, J, Finak, G, Chen, L, Wishart, D, Lee, W, McIntosh, L.P, Gehring, K, Kennedy, M.A, Edwards, A.M, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-12-22
Release date:2004-02-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:AN NMR APPROACH TO STRUCTURAL PROTEOMICS
Proc.Natl.Acad.Sci.USA, 99, 2002
1SG5
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BU of 1sg5 by Molmil
Solution structure of Yaeo, a Rho-specific inhibitor of transcription termination
Descriptor: orf, hypothetical protein
Authors:Gutierrez, P, Gehring, K, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2004-02-23
Release date:2005-07-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of YaeO, a Rho-specific Inhibitor of Transcription Termination
J.Biol.Chem., 282, 2007
1SG7
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BU of 1sg7 by Molmil
NMR solution structure of the putative cation transport regulator ChaB
Descriptor: Putative Cation transport regulator chaB
Authors:Osborne, M.J, Siddiqui, N, Cygler, M, Gehring, K, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2004-02-23
Release date:2005-03-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of ChaB, a putative membrane ion antiporter regulator from Escherichia coli
BMC STRUCT.BIOL., 4, 2004
1SSL
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BU of 1ssl by Molmil
Solution structure of the PSI domain from the Met receptor
Descriptor: Hepatocyte growth factor receptor
Authors:Kozlov, G, Perreault, A, Schrag, J.D, Cygler, M, Gehring, K, Ekiel, I.
Deposit date:2004-03-24
Release date:2004-10-12
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Insights into function of PSI domains from structure of the Met receptor PSI domain.
Biochem.Biophys.Res.Commun., 321, 2004
1U6F
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BU of 1u6f by Molmil
NMR solution structure of TcUBP1, a single RBD-unit from Trypanosoma cruzi
Descriptor: RNA-binding protein UBP1
Authors:Volpon, L, D'orso, I, Frasch, A, Gehring, K.
Deposit date:2004-07-29
Release date:2005-01-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR Structural Study of TcUBP1, a Single RRM Domain Protein from Trypanosoma cruzi: Contribution of a beta Hairpin to RNA Binding
Biochemistry, 44, 2005
1TQZ
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BU of 1tqz by Molmil
Solution structure of NECAP1 protein
Descriptor: NECAP1
Authors:Denisov, A.Y, Ritter, B, McPherson, P.S, Gehring, K.
Deposit date:2004-06-18
Release date:2005-07-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of NECAP1 protein
To be Published
1TVM
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BU of 1tvm by Molmil
NMR structure of enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system
Descriptor: PTS system, galactitol-specific IIB component
Authors:Volpon, L, Young, C.R, Lim, N.S, Iannuzzi, P, Cygler, M, Gehring, K, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2004-06-29
Release date:2005-09-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system and its interaction with GatA.
Protein Sci., 15, 2006
3NTW
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BU of 3ntw by Molmil
Structure of the MLLE domain of EDD in complex with a PAM2 peptide from Paip1
Descriptor: E3 ubiquitin-protein ligase UBR5, Polyadenylate-binding protein-interacting protein 1
Authors:Kozlov, G, Gehring, K.
Deposit date:2010-07-05
Release date:2011-07-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The MLLE domain of the ubiquitin ligase UBR5 binds to its catalytic domain to regulate substrate binding.
J. Biol. Chem., 290, 2015
3NY1
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Structure of the ubr-box of the UBR1 ubiquitin ligase
Descriptor: E3 ubiquitin-protein ligase UBR1, ZINC ION
Authors:Matta-Camacho, E, Kozlov, G, Li, F, Gehring, K.
Deposit date:2010-07-14
Release date:2010-08-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.085 Å)
Cite:Structural basis of substrate recognition and specificity in the N-end rule pathway.
Nat.Struct.Mol.Biol., 17, 2010
3O0X
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Structural basis of carbohydrate recognition by calreticulin
Descriptor: CALCIUM ION, Calreticulin, alpha-D-glucopyranose-(1-3)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Kozlov, G, Gehring, K.
Deposit date:2010-07-20
Release date:2010-09-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural basis of carbohydrate recognition by calreticulin.
J.Biol.Chem., 285, 2010
3O0W
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Structural basis of carbohydrate recognition by calreticulin
Descriptor: CALCIUM ION, Calreticulin, alpha-D-glucopyranose-(1-3)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Kozlov, G, Gehring, K.
Deposit date:2010-07-20
Release date:2010-09-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis of carbohydrate recognition by calreticulin.
J.Biol.Chem., 285, 2010
3NY3
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BU of 3ny3 by Molmil
Structure of the ubr-box of UBR2 in complex with N-degron
Descriptor: E3 ubiquitin-protein ligase UBR2, N-degron, ZINC ION
Authors:Matta-Camacho, E, Kozlov, G, Li, F, Gehring, K.
Deposit date:2010-07-14
Release date:2010-08-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of substrate recognition and specificity in the N-end rule pathway.
Nat.Struct.Mol.Biol., 17, 2010
3O0V
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Crystal structure of the calreticulin lectin domain
Descriptor: CALCIUM ION, Calreticulin
Authors:Kozlov, G, Gehring, K.
Deposit date:2010-07-20
Release date:2010-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of carbohydrate recognition by calreticulin.
J.Biol.Chem., 285, 2010
5TDB
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BU of 5tdb by Molmil
Crystal structure of the human UBR-box domain from UBR2 in complex with asymmetrically double methylated arginine peptide
Descriptor: 1,2-ETHANEDIOL, DA2-ILE-PHE-SER peptide, E3 ubiquitin-protein ligase UBR2, ...
Authors:Munoz-Escobar, J, Kozlov, G, Gehring, K.
Deposit date:2016-09-19
Release date:2017-03-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.101 Å)
Cite:Bound Waters Mediate Binding of Diverse Substrates to a Ubiquitin Ligase.
Structure, 25, 2017
5TDD
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BU of 5tdd by Molmil
Human UBR-box from UBR2 in complex with HIFS peptide
Descriptor: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase UBR2, HIS-ILE-PHE-SER peptide, ...
Authors:Munoz-Escobar, J, Kozlov, G, Gehring, K.
Deposit date:2016-09-19
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Bound Waters Mediate Binding of Diverse Substrates to a Ubiquitin Ligase.
Structure, 25, 2017
5TGG
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Solution structure of parallel stranded adenosine duplex
Descriptor: RNA/DNA (5'-D(P*T)-R(*(A2M)P*(A2M)P*(A2M)P*(A2M))-D(P*A)-R(P*(A2M)P*(A2M)P*(A2M))-3')
Authors:Denisov, A, Noronha, A, Gehring, K, Wilds, C.
Deposit date:2016-09-27
Release date:2017-08-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Influence of nucleotide modifications at the C2' position on the Hoogsteen base-paired parallel-stranded duplex of poly(A) RNA.
Nucleic Acids Res., 45, 2017

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