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PDB: 15 results

5K3V
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apo-PDX1.3 (Arabidopsis)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Pyridoxal 5'-phosphate synthase subunit PDX1.3, ...
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Fitzpatrick, T.B.
Deposit date:2016-05-20
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural definition of the lysine swing in Arabidopsis thaliana PDX1: Intermediate channeling facilitating vitamin B6 biosynthesis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K2Z
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PDX1.3-adduct (Arabidopsis)
Descriptor: 1,2-ETHANEDIOL, 2-azanylpenta-1,4-dien-3-one, CHLORIDE ION, ...
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Fitzpatrick, T.B.
Deposit date:2016-05-19
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural definition of the lysine swing in Arabidopsis thaliana PDX1: Intermediate channeling facilitating vitamin B6 biosynthesis.
Proc.Natl.Acad.Sci.USA, 113, 2016
4N7Q
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Crystal structure of eukaryotic THIC from A. thaliana
Descriptor: COBALT (II) ION, HEXANE-1,6-DIOL, Phosphomethylpyrimidine synthase, ...
Authors:Coquille, S.C, Roux, C, Mehta, A, Begley, T.P, Fitzpatrick, T.B, Thore, S.
Deposit date:2013-10-16
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution crystal structure of the eukaryotic HMP-P synthase (THIC) from Arabidopsis thaliana.
J.Struct.Biol., 184, 2013
6HYE
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PDX1.2/PDX1.3 complex (PDX1.3:K97A)
Descriptor: Pyridoxal 5'-phosphate synthase subunit PDX1.3, Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, SULFATE ION
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Martinez-Font, J, Hothorn, M, Thore, S, Fitzpatrick, T.B.
Deposit date:2018-10-20
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse.
Acta Crystallogr D Struct Biol, 75, 2019
6HXG
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PDX1.2/PDX1.3 complex (intermediate)
Descriptor: Pyridoxal 5'-phosphate synthase subunit PDX1.3, Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, SULFATE ION
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Martinez-Font, J, Hothorn, M, Thore, S, Fitzpatrick, T.B.
Deposit date:2018-10-17
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse.
Acta Crystallogr D Struct Biol, 75, 2019
6HX3
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PDX1.2/PDX1.3 complex
Descriptor: Pyridoxal 5'-phosphate synthase subunit PDX1.3, Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, SULFATE ION
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Martinez-Font, J, Hothorn, M, Thore, S, Fitzpatrick, T.B.
Deposit date:2018-10-15
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse.
Acta Crystallogr D Struct Biol, 75, 2019
4H67
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BU of 4h67 by Molmil
Crystal structure of HMP synthase Thi5 from S. cerevisiae
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Pyrimidine precursor biosynthesis enzyme THI5, SULFATE ION
Authors:Coquille, S.C, Roux, C, Fitzpatrick, T, Thore, S.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Last Piece in the Vitamin B1 Biosynthesis Puzzle: STRUCTURAL AND FUNCTIONAL INSIGHT INTO YEAST 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE PHOSPHATE (HMP-P) SYNTHASE.
J.Biol.Chem., 287, 2012
2ABW
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BU of 2abw by Molmil
Glutaminase subunit of the plasmodial PLP synthase (Vitamin B6 biosynthesis)
Descriptor: Pdx2 protein, TETRAETHYLENE GLYCOL
Authors:Gengenbacher, M, Fitzpatrick, T.B, Raschle, T, Flicker, K, Sinning, I, Mueller, S, Macheroux, P, Tews, I, Kappes, B.
Deposit date:2005-07-17
Release date:2006-01-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Vitamin B6 Biosynthesis by the Malaria Parasite Plasmodium falciparum: Biochemical and structural insights
J.Biol.Chem., 281, 2006
4H6D
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BU of 4h6d by Molmil
Crystal structure of PLP-soaked HMP synthase Thi5 from S. cerevisiae
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Pyrimidine precursor biosynthesis enzyme THI5
Authors:Coquille, S.C, Roux, C, Fitzpatrick, T, Thore, S.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Last Piece in the Vitamin B1 Biosynthesis Puzzle: STRUCTURAL AND FUNCTIONAL INSIGHT INTO YEAST 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE PHOSPHATE (HMP-P) SYNTHASE.
J.Biol.Chem., 287, 2012
4H65
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Crystal structure of SeMet derivative of HMP synthase Thi5 from S. cerevisiae
Descriptor: Pyrimidine precursor biosynthesis enzyme THI5
Authors:Coquille, S.C, Roux, C, Fitzpatrick, T, Thore, S.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Last Piece in the Vitamin B1 Biosynthesis Puzzle: STRUCTURAL AND FUNCTIONAL INSIGHT INTO YEAST 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE PHOSPHATE (HMP-P) SYNTHASE.
J.Biol.Chem., 287, 2012
1Z41
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Crystal structure of oxidized YqjM from Bacillus subtilis
Descriptor: FLAVIN MONONUCLEOTIDE, Probable NADH-dependent flavin oxidoreductase yqjM, SULFATE ION
Authors:Kitzing, K, Fitzpatrick, T.B, Wilken, C, Sawa, J, Bourenkov, G.P, Macheroux, P, Clausen, T.
Deposit date:2005-03-15
Release date:2005-05-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The 1.3 A Crystal Structure of the Flavoprotein YqjM Reveals a Novel Class of Old Yellow Enzymes
J.Biol.Chem., 280, 2005
1Z42
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BU of 1z42 by Molmil
Crystal structure of oxidized YqjM from Bacillus subtilis complexed with p-hydroxybenzaldehyde
Descriptor: FLAVIN MONONUCLEOTIDE, P-HYDROXYBENZALDEHYDE, Probable NADH-dependent flavin oxidoreductase yqjM, ...
Authors:Kitzing, K, Fitzpatrick, T.B, Wilken, C, Sawa, J, Bourenkov, G.P, Macheroux, P, Clausen, T.
Deposit date:2005-03-15
Release date:2005-05-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The 1.3 A Crystal Structure of the Flavoprotein YqjM Reveals a Novel Class of Old Yellow Enzymes
J.Biol.Chem., 280, 2005
1Z44
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Crystal structure of oxidized YqjM from Bacillus subtilis complexed with p-nitrophenol
Descriptor: FLAVIN MONONUCLEOTIDE, P-NITROPHENOL, Probable NADH-dependent flavin oxidoreductase yqjM, ...
Authors:Kitzing, K, Fitzpatrick, T.B, Wilken, C, Sawa, J, Bourenkov, G.P, Macheroux, P, Clausen, T.
Deposit date:2005-03-15
Release date:2005-05-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The 1.3 A Crystal Structure of the Flavoprotein YqjM Reveals a Novel Class of Old Yellow Enzymes
J.Biol.Chem., 280, 2005
1Z48
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Crystal structure of reduced YqjM from Bacillus subtilis
Descriptor: FLAVIN MONONUCLEOTIDE, Probable NADH-dependent flavin oxidoreductase yqjM
Authors:Kitzing, K, Fitzpatrick, T.B, Wilken, C, Sawa, J, Bourenkov, G.P, Macheroux, P, Clausen, T.
Deposit date:2005-03-15
Release date:2005-05-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The 1.3 A Crystal Structure of the Flavoprotein YqjM Reveals a Novel Class of Old Yellow Enzymes
J.Biol.Chem., 280, 2005
1ZCH
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BU of 1zch by Molmil
Structure of the hypothetical oxidoreductase YcnD from Bacillus subtilis
Descriptor: CALCIUM ION, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Morokutti, A, Lyskowski, A, Sollner, S, Pointner, E, Fitzpatrick, T.B, Kratky, C, Gruber, K, Macheroux, P.
Deposit date:2005-04-12
Release date:2005-11-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and Function of YcnD from Bacillus subtilis, a Flavin-Containing Oxidoreductase(,).
Biochemistry, 44, 2005

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