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PDB: 434 results

1HOV
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BU of 1hov by Molmil
SOLUTION STRUCTURE OF A CATALYTIC DOMAIN OF MMP-2 COMPLEXED WITH SC-74020
Descriptor: CALCIUM ION, MATRIX METALLOPROTEINASE-2, N-{4-[(1-HYDROXYCARBAMOYL-2-METHYL-PROPYL)-(2-MORPHOLIN-4-YL-ETHYL)-SULFAMOYL]-4-PENTYL-BENZAMIDE, ...
Authors:Feng, Y, Likos, J.J, Zhu, L, Woodward, H, Munie, G, McDonald, J.J, Stevens, A.M, Howard, C.P, De Crescenzo, G.A, Welsch, D, Shieh, H.-S, Stallings, W.C.
Deposit date:2000-12-11
Release date:2001-12-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of the catalytic domain of matrix metalloproteinase-2 complexed with a hydroxamic acid inhibitor
Biochim.Biophys.Acta, 1598, 2002
6INW
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BU of 6inw by Molmil
A Pericyclic Reaction enzyme
Descriptor: O-methyltransferase lepI, S-ADENOSYLMETHIONINE
Authors:Feng, Y, Chang, M, Wang, H, Liu, Z, Zhou, Y.
Deposit date:2018-10-28
Release date:2019-07-03
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Crystal structure of the multifunctional SAM-dependent enzyme LepI provides insights into its catalytic mechanism.
Biochem.Biophys.Res.Commun., 515, 2019
6IGM
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BU of 6igm by Molmil
Cryo-EM Structure of Human SRCAP Complex
Descriptor: Actin-related protein 6, Helicase SRCAP, RuvB-like 1, ...
Authors:Feng, Y, Tian, Y, Wu, Z, Xu, Y.
Deposit date:2018-09-25
Release date:2019-07-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of human SRCAP complex.
Cell Res., 28, 2018
1JLI
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BU of 1jli by Molmil
HUMAN INTERLEUKIN 3 (IL-3) MUTANT WITH TRUNCATION AT BOTH N-AND C-TERMINI AND 14 RESIDUE CHANGES, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: INTERLEUKIN 3
Authors:Feng, Y, Klein, B.K, Mcwherter, C.A.
Deposit date:1995-12-14
Release date:1997-06-16
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Three-dimensional solution structure and backbone dynamics of a variant of human interleukin-3.
J.Mol.Biol., 259, 1996
2MK5
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BU of 2mk5 by Molmil
Solution structure of a protein domain
Descriptor: Endolysin
Authors:Feng, Y, Gu, J.
Deposit date:2014-01-24
Release date:2014-05-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and biochemical characterization reveals LysGH15 as an unprecedented "EF-hand-like" calcium-binding phage lysin.
Plos Pathog., 10, 2014
5YIM
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BU of 5yim by Molmil
Structure of a Legionella effector
Descriptor: SdeA
Authors:Feng, Y, Dong, Y, Wang, W.
Deposit date:2017-10-05
Release date:2018-05-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.394 Å)
Cite:Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
5YIK
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BU of 5yik by Molmil
Structure of a Legionella effector with its substrate
Descriptor: SdeA, ubiquitin
Authors:Feng, Y, Dong, Y, Liu, Z.
Deposit date:2017-10-05
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
5YIJ
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BU of 5yij by Molmil
Structure of a Legionella effector with substrates
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, SdeA, Ubiquitin
Authors:Feng, Y, Mu, Y, Wang, H.
Deposit date:2017-10-05
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
1Z7P
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BU of 1z7p by Molmil
Solution structure of reduced glutaredoxin C1 from Populus tremula x tremuloides
Descriptor: glutaredoxin
Authors:Feng, Y, Zhong, N, Rouhier, N, Jacquot, J.P, Xia, B.
Deposit date:2005-03-26
Release date:2006-03-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Insight into Poplar Glutaredoxin C1 with a Bridging Iron-Sulfur Cluster at the Active Site
Biochemistry, 45, 2006
8H2J
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BU of 8h2j by Molmil
Structure of Acb2 complexed with 3',3'-cGAMP
Descriptor: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, p26
Authors:Feng, Y, Cao, X.L.
Deposit date:2022-10-06
Release date:2023-02-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Bacteriophages inhibit and evade cGAS-like immune function in bacteria.
Cell, 186, 2023
8H2X
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BU of 8h2x by Molmil
Structure of Acb2
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, p26
Authors:Feng, Y, Cao, X.L.
Deposit date:2022-10-07
Release date:2023-02-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Bacteriophages inhibit and evade cGAS-like immune function in bacteria.
Cell, 186, 2023
8H39
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BU of 8h39 by Molmil
Structure of Acb2 complexed with c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, 1,2-ETHANEDIOL, p26
Authors:Feng, Y, Cao, X.L.
Deposit date:2022-10-08
Release date:2023-02-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Bacteriophages inhibit and evade cGAS-like immune function in bacteria.
Cell, 186, 2023
3CVA
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BU of 3cva by Molmil
Human Bcl-xL containing a Trp to Ala mutation at position 137
Descriptor: Apoptosis regulator Bcl-X
Authors:Feng, Y, Zhang, L, Hu, T, Shen, X, Chen, K, Jiang, H, Liu, D.
Deposit date:2008-04-18
Release date:2009-03-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A conserved hydrophobic core at Bcl-x(L) mediates its structural stability and binding affinity with BH3-domain peptide of pro-apoptotic protein
Arch.Biochem.Biophys., 484, 2009
4ZH2
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BU of 4zh2 by Molmil
Crystal structure of Escherichia coli RNA polymerase in complex with CBR703
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Feng, Y, Ebright, R.H.
Deposit date:2015-04-24
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.204 Å)
Cite:Structural Basis of Transcription Inhibition by CBR Hydroxamidines and CBR Pyrazoles.
Structure, 23, 2015
4ZH3
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BU of 4zh3 by Molmil
Crystal structure of Escherichia coli RNA polymerase in complex with CBRH16-Br
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Feng, Y, Ebright, R.H.
Deposit date:2015-04-24
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.082 Å)
Cite:Structural Basis of Transcription Inhibition by CBR Hydroxamidines and CBR Pyrazoles.
Structure, 23, 2015
4ZH4
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BU of 4zh4 by Molmil
Crystal structure of Escherichia coli RNA polymerase in complex with CBRP18
Descriptor: 5-(4-fluorophenyl)-4-[4-fluoro-3-(trifluoromethyl)phenyl]-1H-pyrazole, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Feng, Y, Ebright, R.H.
Deposit date:2015-04-24
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.993 Å)
Cite:Structural Basis of Transcription Inhibition by CBR Hydroxamidines and CBR Pyrazoles.
Structure, 23, 2015
6A9Y
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BU of 6a9y by Molmil
The crystal structure of Mu homology domain of SGIP1
Descriptor: SH3-containing GRB2-like protein 3-interacting protein 1
Authors:Feng, Y, Liu, X.
Deposit date:2018-07-16
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:SGIP1 dimerizes via intermolecular disulfide bond in mu HD domain during cellular endocytosis.
Biochem. Biophys. Res. Commun., 505, 2018
1Z7R
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BU of 1z7r by Molmil
Solution Structure of reduced glutaredoxin C1 from Populus tremula x tremuloides
Descriptor: glutaredoxin
Authors:Feng, Y, Zhong, N, Rouhier, N, Jacquot, J.P, Xia, B.
Deposit date:2005-03-26
Release date:2006-03-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Insight into Poplar Glutaredoxin C1 with a Bridging Iron-Sulfur Cluster at the Active Site
Biochemistry, 45, 2006
6SXN
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BU of 6sxn by Molmil
Crystal structure of P212121 apo form of CrtE
Descriptor: Geranylgeranyl pyrophosphate synthase
Authors:Feng, Y, Morgan, R.M.L, Nixon, P.J.
Deposit date:2019-09-26
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Crystal Structure of Geranylgeranyl Pyrophosphate Synthase (CrtE) Involved in Cyanobacterial Terpenoid Biosynthesis.
Front Plant Sci, 11, 2020
6SXL
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BU of 6sxl by Molmil
Crystal structure of CrtE
Descriptor: Geranylgeranyl pyrophosphate synthase, PHOSPHATE ION
Authors:Feng, Y, Morgan, R.M.L, Nixon, P.J.
Deposit date:2019-09-26
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Geranylgeranyl Pyrophosphate Synthase (CrtE) Involved in Cyanobacterial Terpenoid Biosynthesis.
Front Plant Sci, 11, 2020
3KXT
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BU of 3kxt by Molmil
Crystal structure of Sulfolobus Cren7-dsDNA complex
Descriptor: 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', Chromatin protein Cren7
Authors:Feng, Y, Wang, J.
Deposit date:2009-12-03
Release date:2010-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Crystal structure of the crenarchaeal conserved chromatin protein Cren7 and double-stranded DNA complex
Protein Sci., 19, 2010
5XVM
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BU of 5xvm by Molmil
Sterol 3-beta-glucosyltransferase (ugt51) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Descriptor: Sterol 3-beta-glucosyltransferase
Authors:Feng, Y, Chen, L.-Q.
Deposit date:2017-06-28
Release date:2017-09-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structural dissection of sterol glycosyltransferase UGT51 from Saccharomyces cerevisiae for substrate specificity.
J. Struct. Biol., 204, 2018
4JND
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BU of 4jnd by Molmil
Structure of a C.elegans sex determining protein
Descriptor: Ca(2+)/calmodulin-dependent protein kinase phosphatase, MAGNESIUM ION
Authors:Feng, Y, Zhang, Y, Ge, J, Yang, M.
Deposit date:2013-03-15
Release date:2013-06-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.652 Å)
Cite:Structural insight into Caenorhabditis elegans sex-determining protein FEM-2.
J.Biol.Chem., 288, 2013
2LEO
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BU of 2leo by Molmil
Solution structure of esophageal cancer-related gene 2
Descriptor: Serine protease inhibitor Kazal-type 7
Authors:Feng, Y, Geng, Y, Wang, J.
Deposit date:2011-06-20
Release date:2012-05-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure note: human esophageal cancer-related gene 2
J.Biomol.Nmr, 53, 2012
5X38
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BU of 5x38 by Molmil
Solution structure of the Family 1 carbohydrate-binding module with glucosylated Ser3
Descriptor: Exoglucanase 1, beta-D-glucopyranose
Authors:Feng, Y, Tan, Z.
Deposit date:2017-02-04
Release date:2017-05-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Insight into the Stabilizing Effect of O-Glycosylation
Biochemistry, 56, 2017

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