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PDB: 39 results

4DPM
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BU of 4dpm by Molmil
Structure of malonyl-coenzyme A reductase from crenarchaeota in complex with CoA
Descriptor: COENZYME A, MAGNESIUM ION, Malonyl-CoA/succinyl-CoA reductase
Authors:Demmer, U, Warkentin, E, Srivastava, A, Kockelkorn, D, Fuchs, G, Ermler, U.
Deposit date:2012-02-13
Release date:2012-12-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for a Bispecific NADP+ and CoA Binding Site in an Archaeal Malonyl-Coenzyme A Reductase.
J.Biol.Chem., 288, 2013
4DPK
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Structure of malonyl-coenzyme A reductase from crenarchaeota
Descriptor: Malonyl-CoA/succinyl-CoA reductase, PHOSPHATE ION
Authors:Demmer, U, Warkentin, E, Srivastava, A, Kockelkorn, D, Fuchs, G, Ermler, U.
Deposit date:2012-02-13
Release date:2012-12-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Basis for a Bispecific NADP+ and CoA Binding Site in an Archaeal Malonyl-Coenzyme A Reductase.
J.Biol.Chem., 288, 2013
4DPL
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BU of 4dpl by Molmil
Structure of malonyl-coenzyme A reductase from crenarchaeota in complex with NadP
Descriptor: Malonyl-CoA/succinyl-CoA reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, UNKNOWN LIGAND
Authors:Demmer, U, Warkentin, E, Srivastava, A, Kockelkorn, D, Fuchs, G, Ermler, U.
Deposit date:2012-02-13
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for a Bispecific NADP+ and CoA Binding Site in an Archaeal Malonyl-Coenzyme A Reductase.
J.Biol.Chem., 288, 2013
4YRY
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Insights into flavin-based electron bifurcation via the NADH-dependent reduced ferredoxin-NADP oxidoreductase structure
Descriptor: Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit homolog, Dihydropyrimidine dehydrogenase subunit A, ...
Authors:Ermler, U, Thauer, R.K, Demmer, J.K, Huang, H, Wang, S, Demmer, U.
Deposit date:2015-03-16
Release date:2015-07-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insights into Flavin-based Electron Bifurcation via the NADH-dependent Reduced Ferredoxin:NADP Oxidoreductase Structure.
J.Biol.Chem., 290, 2015
4YLF
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Insights into flavin-based electron bifurcation via the NADH-dependent reduced ferredoxin-NADP oxidoreductase structure
Descriptor: Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit homolog, Dihydropyrimidine dehydrogenase subunit A, ...
Authors:Ermler, U, Thauer, R.K, Demmer, J.K, Huang, H, Wang, S, Demmer, U.
Deposit date:2015-03-05
Release date:2015-07-08
Last modified:2015-09-16
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Insights into Flavin-based Electron Bifurcation via the NADH-dependent Reduced Ferredoxin:NADP Oxidoreductase Structure.
J.Biol.Chem., 290, 2015
1Z47
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BU of 1z47 by Molmil
Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius
Descriptor: CHLORIDE ION, putative ABC-transporter ATP-binding protein
Authors:Scheffel, F, Demmer, U, Warkentin, E, Huelsmann, A, Schneider, E, Ermler, U.
Deposit date:2005-03-15
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius
Febs Lett., 579, 2005
2Y0F
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BU of 2y0f by Molmil
STRUCTURE OF GCPE (IspG) FROM THERMUS THERMOPHILUS HB27
Descriptor: 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE, IRON/SULFUR CLUSTER
Authors:Rekittke, I, Nonaka, T, Wiesner, J, Demmer, U, Warkentin, E, Jomaa, H, Ermler, U.
Deposit date:2010-12-02
Release date:2011-01-26
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the E-1-Hydroxy-2-Methyl-But-2-Enyl-4-Diphosphate Synthase (Gcpe) from Thermus Thermophilus.
FEBS Lett., 585, 2011
4L2I
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BU of 4l2i by Molmil
Electron transferring flavoprotein of Acidaminococcus fermentans: Towards a mechanism of flavin-based electron bifurcation
Descriptor: CHLORIDE ION, Electron transfer flavoprotein alpha subunit, Electron transfer flavoprotein alpha/beta-subunit, ...
Authors:Mowafy, A.M, Chowdhury, N.P, Demmer, J, Upadhyay, V, Kolzer, S, Jayamani, E, Kahnt, J, Demmer, U, Ermler, U, Buckel, W.
Deposit date:2013-06-04
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans.
J.Biol.Chem., 289, 2014
4L1F
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Electron transferring flavoprotein of Acidaminococcus fermentans: Towards a mechanism of flavin-based electron bifurcation
Descriptor: 1,3-PROPANDIOL, Acyl-CoA dehydrogenase domain protein, COENZYME A PERSULFIDE, ...
Authors:Mowafy, A.M, Chowdhury, N.P, Demmer, J, Upadhyay, V, Kolzer, S, Jayamani, E, Kahnt, J, Demmer, U, Ermler, U, Buckel, W.
Deposit date:2013-06-03
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans.
J.Biol.Chem., 289, 2014
1LU9
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BU of 1lu9 by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1
Descriptor: Methylene Tetrahydromethanopterin Dehydrogenase
Authors:Ermler, U, Hagemeier, C.H, Roth, A, Demmer, U, Grabarse, W, Warkentin, E, Vorholt, J.A.
Deposit date:2002-05-22
Release date:2002-09-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of methylene-tetrahydromethanopterin dehydrogenase from methylobacterium extorquens AM1.
Structure, 10, 2002
1LUA
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BU of 1lua by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1 complexed with NADP
Descriptor: Methylene Tetrahydromethanopterin Dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ermler, U, Hagemeier, C.H, Roth, A, Demmer, U, Grabarse, W, Warkentin, E, Vorholt, J.A.
Deposit date:2002-05-22
Release date:2002-09-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of methylene-tetrahydromethanopterin dehydrogenase from methylobacterium extorquens AM1.
Structure, 10, 2002
1Y5Y
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BU of 1y5y by Molmil
Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1
Descriptor: CALCIUM ION, Formaldehyde-activating enzyme fae, SODIUM ION
Authors:Acharya, P, Goenrich, M, Hagemeier, C.H, Demmer, U, Vorholt, J.A, Thauer, R.K, Ermler, U.
Deposit date:2004-12-03
Release date:2005-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:How an enzyme binds the C1-carrier tetrahydromethanopterin: Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1
J.Biol.Chem., 280, 2005
1Y60
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BU of 1y60 by Molmil
Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1 with bound 5,10-methylene tetrahydromethanopterin
Descriptor: 5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN, Formaldehyde-activating enzyme fae
Authors:Acharya, P, Goenrich, M, Hagemeier, C.H, Demmer, U, Vorholt, J.A, Thauer, R.K, Ermler, U.
Deposit date:2004-12-03
Release date:2005-01-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:How an enzyme binds the C1-carrier tetrahydromethanopterin: Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1
J.Biol.Chem., 280, 2005
6FAH
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BU of 6fah by Molmil
Molecular basis of the flavin-based electron-bifurcating caffeyl-CoA reductase reaction
Descriptor: Caffeyl-CoA reductase-Etf complex subunit CarC, Caffeyl-CoA reductase-Etf complex subunit CarD, Caffeyl-CoA reductase-Etf complex subunit CarE, ...
Authors:Demmer, J.K, Bertsch, J, Oeppinger, C, Wohlers, H, Kayastha, K, Demmer, U, Ermler, U, Mueller, V.
Deposit date:2017-12-15
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.133 Å)
Cite:Molecular basis of the flavin-based electron-bifurcating caffeyl-CoA reductase reaction.
FEBS Lett., 592, 2018
4KPU
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BU of 4kpu by Molmil
Electron transferring flavoprotein of Acidaminococcus fermentans: Towards a mechanism of flavin-based electron bifurcation
Descriptor: CHLORIDE ION, Electron transfer flavoprotein alpha subunit, Electron transfer flavoprotein alpha/beta-subunit, ...
Authors:Mowafy, A.M, Chowdhury, N.P, Demmer, J, Upadhyay, V, Kolzer, S, Jayamani, E, Kahnt, J, Demmer, U, Ermler, U, Buckel, W.
Deposit date:2013-05-14
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans.
J.Biol.Chem., 289, 2014
3IQZ
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BU of 3iqz by Molmil
Structure of F420 dependent methylene-tetrahydromethanopterin dehydrogenase in complex with methylene-tetrahydromethanopterin
Descriptor: 5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN, CALCIUM ION, F420-dependent methylenetetrahydromethanopterin dehydrogenase, ...
Authors:Ceh, K.E, Demmer, U, Warkentin, E, Moll, J, Thauer, R.K, Shima, S, Ermler, U.
Deposit date:2009-08-21
Release date:2009-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the hydride transfer mechanism in F(420)-dependent methylenetetrahydromethanopterin dehydrogenase
Biochemistry, 48, 2009
3IQE
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BU of 3iqe by Molmil
Structure of F420 dependent methylene-tetrahydromethanopterin dehydrogenase in complex with methylene-tetrahydromethanopterin and coenzyme F420
Descriptor: 5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN, CALCIUM ION, COENZYME F420, ...
Authors:Ceh, K.E, Demmer, U, Warkentin, E, Moll, J, Thauer, R.K, Shima, S, Ermler, U.
Deposit date:2009-08-20
Release date:2009-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of the hydride transfer mechanism in F(420)-dependent methylenetetrahydromethanopterin dehydrogenase
Biochemistry, 48, 2009
3IQF
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BU of 3iqf by Molmil
Structure of F420 dependent methylene-tetrahydromethanopterin dehydrogenase in complex with methenyl-tetrahydromethanopterin
Descriptor: 1-{4-[(6S,6aR,7R)-3-amino-6,7-dimethyl-1-oxo-1,2,5,6,6a,7-hexahydro-8H-imidazo[1,5-f]pteridin-10-ium-8-yl]phenyl}-1-deoxy-5-O-{5-O-[(S)-{[(1S)-1,3-dicarboxypropyl]oxy}(hydroxy)phosphoryl]-alpha-D-ribofuranosyl}-D-ribitol, CALCIUM ION, F420-dependent methylenetetrahydromethanopterin dehydrogenase, ...
Authors:Ceh, K.E, Demmer, U, Warkentin, E, Moll, J, Thauer, R.K, Shima, S, Ermler, U.
Deposit date:2009-08-20
Release date:2009-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the hydride transfer mechanism in F(420)-dependent methylenetetrahydromethanopterin dehydrogenase
Biochemistry, 48, 2009
7PXP
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BU of 7pxp by Molmil
Benzoylsuccinyl-CoA thiolase
Descriptor: Benzoylsuccinyl-CoA thiolase subunit, ZINC ION
Authors:Ermler, U, Heider, H, Weidenweber, S, Demmer, U.
Deposit date:2021-10-08
Release date:2022-04-06
Last modified:2022-09-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Finis tolueni: a new type of thiolase with an integrated Zn-finger subunit catalyzes the final step of anaerobic toluene metabolism.
Febs J., 289, 2022
5MLD
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BU of 5mld by Molmil
Crystal Structure of RosB with bound intermediate AFP (8-demethyl-8-aminoriboflavin-5'-phosphate)
Descriptor: 8-demethyl-8-aminoriboflavin-5'-phosphate, BRAMP domain protein
Authors:Konjik, V, Bruenle, S, Demmer, U, Vanselow, A, Sandhoff, R, Mack, M, Ermler, U.
Deposit date:2016-12-06
Release date:2017-12-20
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of RosB gives insights into the reaction mechanism of this first known member of a new family of flavodoxin-like enzymes
To be published
3SQG
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BU of 3sqg by Molmil
Crystal structure of a methyl-coenzyme M reductase purified from Black Sea mats
Descriptor: (17[2]S)-17[2]-methylthio-coenzyme F43, 1-THIOETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Shima, S, Krueger, M, Weinert, T, Demmer, U, Thauer, R.K, Ermler, U.
Deposit date:2011-07-05
Release date:2011-11-30
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a methyl-coenzyme M reductase from Black Sea mats that oxidize methane anaerobically.
Nature, 481, 2011
5MJI
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BU of 5mji by Molmil
Crystal Structure of RosB with bound intermediate OHC-RP (8-demethyl-8-formylriboflavin-5'-phosphate)
Descriptor: BRAMP domain protein, [(2~{S},3~{R},4~{R})-5-[8-methanoyl-7-methyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-ium-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate
Authors:Konjik, V, Bruenle, S, Demmer, U, Vanselow, A, Sandhoff, R, Mack, M, Ermler, U.
Deposit date:2016-12-01
Release date:2016-12-28
Last modified:2017-01-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of RosB: Insights into the Reaction Mechanism of the First Member of a Family of Flavodoxin-like Enzymes.
Angew. Chem. Int. Ed. Engl., 56, 2017
4DNX
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BU of 4dnx by Molmil
The structure of the ATP sulfurylase from Allochromatium vinosum in the open state
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Sulfate adenylyltransferase
Authors:Parey, K, Demmer, U, Warkentin, E, Dahl, C, Ermler, U.
Deposit date:2012-02-09
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural, biochemical and genetic characterization of dissimilatory ATP sulfurylase from Allochromatium vinosum.
Plos One, 8, 2013
4NDR
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BU of 4ndr by Molmil
Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity
Descriptor: (mu3-oxo)-tris(mu2-oxo)-nonakisoxo-trimolybdenum (VI), ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Poppe, J, Warkentin, E, Demmer, U, Ermler, U.
Deposit date:2013-10-27
Release date:2014-08-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein.
J.Inorg.Biochem., 138, 2014
6TLK
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BU of 6tlk by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylorubrum extorquens AM1 in an open conformation containing NADP+ and methylene-H4MPT
Descriptor: 5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN, Bifunctional protein MdtA, CHLORIDE ION, ...
Authors:Wagner, T, Huang, G, Demmer, U, Warkentin, E, Ermler, U, Shima, S.
Deposit date:2019-12-02
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Hydride Transfer Process in NADP-dependent Methylene-tetrahydromethanopterin Dehydrogenase.
J.Mol.Biol., 432, 2020

 

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