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PDB: 60 results

1SRQ
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BU of 1srq by Molmil
Crystal Structure of the Rap1GAP catalytic domain
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GTPase-activating protein 1, SULFATE ION
Authors:Daumke, O, Weyand, M, Chakrabarti, P.P, Vetter, I.R, Wittinghofer, A.
Deposit date:2004-03-23
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The GTPase activating protein Rap1GAP uses a catalytic asparagine
Nature, 429, 2004
2QPT
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BU of 2qpt by Molmil
Crystal structure of an EHD ATPase involved in membrane remodelling
Descriptor: CALCIUM ION, EH DOMAIN-CONTAINING PROTEIN-2, MAGNESIUM ION, ...
Authors:Daumke, O.
Deposit date:2007-07-25
Release date:2007-10-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Architectural and mechanistic insights into an EHD ATPase involved in membrane remodelling.
Nature, 449, 2007
5NJ8
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BU of 5nj8 by Molmil
Structural basis for aryl hydrocarbon receptor mediated gene activation
Descriptor: ACETATE ION, Aryl hydrocarbon receptor, Aryl hydrocarbon receptor nuclear translocator, ...
Authors:Daumke, O, Schulte, K.W.
Deposit date:2017-03-28
Release date:2017-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural Basis for Aryl Hydrocarbon Receptor-Mediated Gene Activation.
Structure, 25, 2017
7SOX
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BU of 7sox by Molmil
Cryo-electron tomography structure of membrane-bound EHD4 complex
Descriptor: EH domain-containing protein 4
Authors:Melo, A.A, Noel, J.K, Daumke, O.
Deposit date:2021-11-01
Release date:2022-11-09
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Cryo-electron tomography reveals structural insights into the membrane remodeling mode of dynamin-like EHD filaments.
Nat Commun, 13, 2022
5FSG
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BU of 5fsg by Molmil
Structure of the hantavirus nucleoprotein provides insights into the mechanism of RNA encapsidation and a template for drug design
Descriptor: MALTOSE-BINDING PERIPLASMIC PROTEIN, HANTAVIRUS NUCLEOPROTEIN, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Olal, D, Daumke, O.
Deposit date:2016-01-05
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.209 Å)
Cite:Structure of the Hantavirus Nucleoprotein Provides Insights Into the Mechanism of RNA Encapsidation.
Cell Rep., 14, 2016
7Z75
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BU of 7z75 by Molmil
PI3KC2a core in complex with PITCOIN3
Descriptor: 1,2-ETHANEDIOL, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, SULFATE ION, ...
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2022-03-15
Release date:2022-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Development of selective inhibitors of phosphatidylinositol 3-kinase C2 alpha.
Nat.Chem.Biol., 19, 2023
7Z74
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BU of 7z74 by Molmil
PI3KC2a core in complex with PITCOIN2
Descriptor: 1,2-ETHANEDIOL, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, ~{N}-[4-(3-hydroxyphenyl)-1,3-thiazol-2-yl]-2-[4-oxidanylidene-3-(2-phenylethyl)pteridin-2-yl]sulfanyl-ethanamide
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2022-03-15
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Development of selective inhibitors of phosphatidylinositol 3-kinase C2 alpha.
Nat.Chem.Biol., 19, 2023
6RZU
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BU of 6rzu by Molmil
Structure of s-Mgm1 decorating the outer surface of tubulated lipid membranes in the GTPgammaS bound state
Descriptor: Putative mitochondrial dynamin protein
Authors:Faelber, K, Dietrich, L, Noel, J.K, Sanchez, R, Kudryashev, M, Kuelbrandt, W, Daumke, O.
Deposit date:2019-06-13
Release date:2019-07-24
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (14.7 Å)
Cite:Structure and assembly of the mitochondrial membrane remodelling GTPase Mgm1.
Nature, 571, 2019
8A9I
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BU of 8a9i by Molmil
PI3KC2a core in complex with PITCOIN1
Descriptor: 1,2-ETHANEDIOL, 2-[4-oxidanylidene-3-(2-phenylethyl)pteridin-2-yl]sulfanyl-~{N}-(1,3-thiazol-2-yl)ethanamide, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, ...
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2022-06-28
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Development of selective inhibitors of phosphatidylinositol 3-kinase C2 alpha.
Nat.Chem.Biol., 19, 2023
3ZJC
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BU of 3zjc by Molmil
Crystal structure of GMPPNP-bound human GIMAP7 L100Q variant
Descriptor: GTPASE IMAP FAMILY MEMBER 7, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Schwefel, D, Daumke, O.
Deposit date:2013-01-17
Release date:2013-03-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural Insights Into the Mechanism of Gtpase Activation in the Gimap Family.
Structure, 21, 2013
1YE8
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BU of 1ye8 by Molmil
Crystal Structure of THEP1 from the hyperthermophile Aquifex aeolicus
Descriptor: Hypothetical UPF0334 kinase-like protein AQ_1292, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Rossbach, M, Daumke, O, Klinger, C, Wittinghofer, A, Kaufmann, M.
Deposit date:2004-12-28
Release date:2005-03-29
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of THEP1 from the hyperthermophile Aquifex aeolicus: a variation of the RecA fold
BMC Struct.Biol., 5, 2005
6QL4
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BU of 6ql4 by Molmil
Crystal structure of nucleotide-free Mgm1
Descriptor: 1,2-ETHANEDIOL, Putative mitochondrial dynamin protein
Authors:Faelber, K, Dietrich, L, Noel, J.K, Wollweber, F, Pfitzner, A.-K, Muehleip, A, Sanchez, R, Kudryashev, M, Chiaruttin, N, Lilie, H, Schlegel, J, Rosenbaum, E, Hessenberger, M, Matthaeus, C, Noe, F, Roux, A, vanderLaan, M, Kuehlbrandt, W, Daumke, O.
Deposit date:2019-01-31
Release date:2019-07-03
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure and assembly of the mitochondrial membrane remodelling GTPase Mgm1.
Nature, 571, 2019
7BI4
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BU of 7bi4 by Molmil
PI3KC2a core apo
Descriptor: 1,2-ETHANEDIOL, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha,Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, SULFATE ION
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2021-01-12
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural basis of phosphatidylinositol 3-kinase C2 alpha function.
Nat.Struct.Mol.Biol., 29, 2022
7BI2
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BU of 7bi2 by Molmil
PI3KC2aDeltaN and DeltaC-C2
Descriptor: 1,2-ETHANEDIOL, 9-(6-aminopyridin-3-yl)-1-[3-(trifluoromethyl)phenyl]benzo[h][1,6]naphthyridin-2(1H)-one, IODIDE ION, ...
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2021-01-12
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural basis of phosphatidylinositol 3-kinase C2 alpha function.
Nat.Struct.Mol.Biol., 29, 2022
7BI6
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BU of 7bi6 by Molmil
PI3KC2a core in complex with ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2021-01-12
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis of phosphatidylinositol 3-kinase C2 alpha function.
Nat.Struct.Mol.Biol., 29, 2022
7BI9
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BU of 7bi9 by Molmil
PI3KC2a core in complex with PIK90
Descriptor: 1,2-ETHANEDIOL, N-(2,3-DIHYDRO-7,8-DIMETHOXYIMIDAZO[1,2-C] QUINAZOLIN-5-YL)NICOTINAMIDE, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha,Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2021-01-12
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of phosphatidylinositol 3-kinase C2 alpha function.
Nat.Struct.Mol.Biol., 29, 2022
7PUZ
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BU of 7puz by Molmil
Crystal structure of the Mic60 coiled coil domain
Descriptor: MICOS complex subunit MIC60
Authors:Bock-Bierbaum, T, Funck, K, Daumke, O.
Deposit date:2021-10-01
Release date:2022-09-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.842 Å)
Cite:Structural insights into crista junction formation by the Mic60-Mic19 complex.
Sci Adv, 8, 2022
7PV0
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BU of 7pv0 by Molmil
Crystal structure of a Mic60-Mic19 fusion protein
Descriptor: MICOS complex subunit MIC60,MICOS complex subunit MIC60-MIC19,Mic60-Mic19, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500)
Authors:Funck, K, Bock-Bierbaum, T, Daumke, O.
Deposit date:2021-10-01
Release date:2022-09-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural insights into crista junction formation by the Mic60-Mic19 complex.
Sci Adv, 8, 2022
7PV1
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BU of 7pv1 by Molmil
Crystal structure of the dimeric mitofilin domain of Mic60 in complex with the CHCH domain of Mic19
Descriptor: MICOS complex subunit MIC60 fused to MIC19, TETRAETHYLENE GLYCOL
Authors:Funck, K, Bock-Bierbaum, T, Daumke, O.
Deposit date:2021-10-01
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Structural insights into crista junction formation by the Mic60-Mic19 complex.
Sci Adv, 8, 2022
8Q1X
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BU of 8q1x by Molmil
Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5' exonuclease-mediated nucleic acid degradation
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-3' exonuclease PLD3, ...
Authors:Roske, Y, Daumke, O, Damme, M.
Deposit date:2023-08-01
Release date:2023-12-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5' exonuclease-mediated nucleic acid degradation.
Nucleic Acids Res., 52, 2024
8Q1K
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BU of 8q1k by Molmil
Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5' exonuclease-mediated nucleic acid degradation
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-3' exonuclease PLD3, ...
Authors:Roske, Y, Daumke, O, Damme, M.
Deposit date:2023-07-31
Release date:2023-12-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5' exonuclease-mediated nucleic acid degradation.
Nucleic Acids Res., 52, 2024
8Q1S
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BU of 8q1s by Molmil
Pathogenic mutations of human phosphorylation sites affect protein-protein interactions
Descriptor: 1,2-ETHANEDIOL, 14-3-3 protein epsilon, BROMIDE ION, ...
Authors:Roske, Y, Daumke, O, Rrustemi, T, Selbach, M.
Deposit date:2023-08-01
Release date:2024-02-21
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:Pathogenic mutations of human phosphorylation sites affect protein-protein interactions.
Nat Commun, 15, 2024
3SZR
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BU of 3szr by Molmil
Crystal structure of modified nucleotide-free human MxA
Descriptor: Interferon-induced GTP-binding protein Mx1
Authors:Gao, S, Daumke, O.
Deposit date:2011-07-19
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of myxovirus resistance protein a reveals intra- and intermolecular domain interactions required for the antiviral function.
Immunity, 35, 2011
6Z3E
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BU of 6z3e by Molmil
Crystal structure of GDP-bound human GIMAP5, amino acid residues 1-276
Descriptor: GTPase IMAP family member 5, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Schwefel, D, Daumke, O.
Deposit date:2020-05-20
Release date:2021-12-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.800387 Å)
Cite:Crystal structure of GDP-bound human GIMAP5
To Be Published
6GMA
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BU of 6gma by Molmil
Crystal structure of the FIP200 C-terminal region
Descriptor: RB1-inducible coiled-coil protein 1
Authors:Witt, M, Bock, T, Daumke, O.
Deposit date:2018-05-24
Release date:2019-03-06
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:FIP200 Claw Domain Binding to p62 Promotes Autophagosome Formation at Ubiquitin Condensates.
Mol.Cell, 74, 2019

 

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PDB entries from 2024-06-12

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