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PDB: 119 results

4S37
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BU of 4s37 by Molmil
Crystal structure of R2 pyocin membrane-piercing spike
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Browning, C.B, Leiman, P.G, Shneider, M.M.
Deposit date:2015-01-26
Release date:2016-01-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of R2 pyocin membrane-piercing spike
To be Published
4S36
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BU of 4s36 by Molmil
Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike
Descriptor: FE (III) ION, Phage baseplate protein
Authors:Browning, C.B, Leiman, P.G, Shneider, M.M.
Deposit date:2015-01-26
Release date:2016-01-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike
To be Published
7XTP
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BU of 7xtp by Molmil
eIF4E in Complex with a Disulphide-Free Autonomous VH Domain
Descriptor: Eukaryotic translation initiation factor 4E, VH-S4ss, [[(2R,3S,4R,5R)-5-(6-AMINO-3-METHYL-4-OXO-5H-IMIDAZO[4,5-C]PYRIDIN-1-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHOXY-HYDROXY-PHOSPHORYL] PHOSPHONO HYDROGEN PHOSPHATE
Authors:Brown, C.J, Frosi, Y, Jiang, S, Lin, Y.C.
Deposit date:2022-05-17
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.828 Å)
Cite:Engineering an autonomous VH domain to modulate intracellular pathways and to interrogate the eIF4F complex.
Nat Commun, 13, 2022
6ED7
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BU of 6ed7 by Molmil
Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor MAC13772
Descriptor: 2-[(2-nitrophenyl)sulfanyl]acetohydrazide, 7,8-diamino-pelargonic acid aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Brown, C.M, Zlitni, S, Chan, J, Brown, E.D, Junop, M.S.
Deposit date:2018-08-08
Release date:2019-08-21
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor MAC13772
To Be Published
4RU3
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BU of 4ru3 by Molmil
Crystal structure of the cell puncturing protein Orf41 from Pseudomonas phage SN
Descriptor: CALCIUM ION, FE (III) ION, GLYCEROL, ...
Authors:Browning, C, Shneider, M.M, Leiman, P.G.
Deposit date:2014-11-18
Release date:2015-11-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.172 Å)
Cite:Crystal structure of the cell puncturing protein Orf41 from Pseudomonas phage SN
To be Published
6AAW
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BU of 6aaw by Molmil
Mdm2 in complex with a D amino Acid Containing Stapled Peptide
Descriptor: ACE-LEU-THR-PHE-STQ-GLU-TYR-DTR-GLN-LEU-CBA-MK8-SER-ALA-ALA, E3 ubiquitin-protein ligase Mdm2
Authors:Brown, C.J, Partridge, A.W.
Deposit date:2018-07-19
Release date:2019-07-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Model System to Explore Macrocyclic Peptide Structural and Chirality Relationships: Tolerance of helix-breaking residues within the context of a stapled peptide.
To Be Published
5XXK
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BU of 5xxk by Molmil
Structure-activity studies of Mdm2/Mdm4-binding stapled peptides comprising non-natural amino acids
Descriptor: E3 ubiquitin-protein ligase Mdm2, Hydrocarbon stapled peptide THC-SER-PHE-0EH-GLU-TYR-6CW-ALA-LEU-LEU-MK8-NH2
Authors:Brown, C.J.
Deposit date:2017-07-04
Release date:2017-12-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structure-activity studies of Mdm2/Mdm4-binding stapled peptides comprising non-natural amino acids.
PLoS ONE, 12, 2017
6BCG
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BU of 6bcg by Molmil
I-LtrI A28G bound to cognate substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (26-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
Authors:Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BCF
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BU of 6bcf by Molmil
I-LtrI G183A bound to cognate substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (26-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
Authors:Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BCE
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BU of 6bce by Molmil
Wild-type I-LtrI bound to cognate substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (27-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
Authors:Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
7D6Y
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BU of 7d6y by Molmil
eIF4E in Complex with a Disulphide-Free Autonomous VH Domain
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Eukaryotic translation initiation factor 4E, VH Domain (1C5), ...
Authors:Brown, C.J, Frosi, Y, Jiang, S, Lin, Y.C.
Deposit date:2020-10-02
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.668 Å)
Cite:Engineering Disulphide-Free Autonomous Antibody VH Domains to modulate intracellular pathways
To Be Published
7F07
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BU of 7f07 by Molmil
Autonomous VH domain that interacts with eIF4E at the Capped mRNA Binding site.
Descriptor: Eukaryotic translation initiation factor 4E, VH domain (VH-DiFCAP-01)
Authors:Brown, C.J, Frosi, Y, Ng, S, Lin, Y.C.
Deposit date:2021-06-03
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Development of a novel peptide aptamer that interacts with the eIF4E capped-mRNA binding site using peptide epitope linker evolution (PELE).
Rsc Chem Biol, 3, 2022
7EZW
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BU of 7ezw by Molmil
Cyclic Peptide that Interacts with the eIF4E Capped-mRNA Binding Site
Descriptor: ALA-CYS-GLU-MET-GLY-PHE-PHE-GLN-ASP-CYS-GLY, Eukaryotic translation initiation factor 4E, SODIUM ION
Authors:Brown, C.J, Ng, S, Frosi, Y.
Deposit date:2021-06-02
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Development of a novel peptide aptamer that interacts with the eIF4E capped-mRNA binding site using peptide epitope linker evolution (PELE).
Rsc Chem Biol, 3, 2022
7BJV
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BU of 7bjv by Molmil
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI09181
Descriptor: DI(HYDROXYETHYL)ETHER, Ecdysone Receptor, L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ...
Authors:Browning, C, McEwen, A.G, Billas, I.M.L.
Deposit date:2021-01-14
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Nonsteroidal ecdysone receptor agonists use a water channel for binding to the ecdysone receptor complex EcR/USP.
J Pestic Sci, 46, 2021
1YLC
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BU of 1ylc by Molmil
Trypsin/BPTI complex mutant
Descriptor: CALCIUM ION, Pancreatic trypsin inhibitor, SULFATE ION, ...
Authors:Brown, C.K, Ohlendorf, D.H.
Deposit date:2005-01-19
Release date:2006-04-25
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Partially folded bovine pancreatic trypsin inhibitor analogues attain fully native structures when co-crystallized with S195A rat trypsin
J.Mol.Biol., 375, 2008
1YKL
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BU of 1ykl by Molmil
Protocatechuate 3,4-Dioxygenase Y408C mutant bound to DHB
Descriptor: 3,4-DIHYDROXYBENZOIC ACID, FE (III) ION, Protocatechuate 3,4-dioxygenase alpha chain, ...
Authors:Brown, C.K, Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YKK
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BU of 1ykk by Molmil
Protocatechuate 3,4-Dioxygenase Y408C Mutant
Descriptor: FE (III) ION, Protocatechuate 3,4-dioxygenase alpha chain, Protocatechuate 3,4-dioxygenase beta chain
Authors:Brown, C.K, Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YKT
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BU of 1ykt by Molmil
Trypsin/Bpti complex mutant
Descriptor: CALCIUM ION, Pancreatic trypsin inhibitor, SULFATE ION, ...
Authors:Brown, C.K, Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2006-04-25
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Partially folded bovine pancreatic trypsin inhibitor analogues attain fully native structures when co-crystallized with S195A rat trypsin
J.Mol.Biol., 375, 2008
1YKM
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BU of 1ykm by Molmil
Protocatechuate 3,4-Dioxygenase Y408E mutant
Descriptor: FE (III) ION, Protocatechuate 3,4-dioxygenase alpha chain, Protocatechuate 3,4-dioxygenase beta chain
Authors:Brown, C.K, Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YKN
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BU of 1ykn by Molmil
Protocatechuate 3,4-dioxygenase Y408E mutant bound to DHB
Descriptor: 3,4-DIHYDROXYBENZOIC ACID, FE (III) ION, Protocatechuate 3,4-dioxygenase alpha chain, ...
Authors:Brown, C.K, Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YKO
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BU of 1yko by Molmil
Protocatechuate 3,4-Dioxygenase Y408H mutant
Descriptor: FE (III) ION, Protocatechuate 3,4-dioxygenase alpha chain, Protocatechuate 3,4-dioxygenase beta chain
Authors:Brown, C.K, Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YLD
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BU of 1yld by Molmil
Trypsin/BPTI complex mutant
Descriptor: CALCIUM ION, Pancreatic trypsin inhibitor, SULFATE ION, ...
Authors:Brown, C.K, Ohlendorf, D.H.
Deposit date:2005-01-19
Release date:2006-04-25
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Partially folded bovine pancreatic trypsin inhibitor analogues attain fully native structures when co-crystallized with S195A rat trypsin
J.Mol.Biol., 375, 2008
1YKP
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BU of 1ykp by Molmil
Protocatechuate 3,4-Dioxygenase Y408H mutant bound to DHB
Descriptor: 3,4-DIHYDROXYBENZOIC ACID, FE (III) ION, Protocatechuate 3,4-dioxygenase alpha chain, ...
Authors:Brown, C.K, Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
6BCN
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BU of 6bcn by Molmil
I-LtrI E184D bound to cognate substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (26-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
Authors:Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BD0
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BU of 6bd0 by Molmil
I-OnuI K227Y, D236A bound to cognate substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (25-MER), Ribosomal protein 3/homing endonuclease-like protein fusion
Authors:Brown, C, Zhang, K, Laforet, M, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:I-OnuI K227Y, D236A bound to cognate substrate (pre-cleavage complex)
To Be Published

221051

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