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PDB: 107 results

7OOJ
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BU of 7ooj by Molmil
Structure of D-Thr53 Ubiquitin
Descriptor: CADMIUM ION, Ubiquitin
Authors:Becker, S.
Deposit date:2021-05-27
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A litmus test for classifying recognition mechanisms of transiently binding proteins.
Nat Commun, 13, 2022
5C58
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BU of 5c58 by Molmil
A double mutant of serratia marcescens hemophore receptor HasR in complex with its hemophore HasA and heme
Descriptor: HasR protein, Hemophore HasA, PROTOPORPHYRIN IX CONTAINING FE
Authors:Becker, S, Diederichs, K, Welte, W.
Deposit date:2015-06-19
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.795 Å)
Cite:Binding of HasA by its transmembrane receptor HasR follows a conformational funnel mechanism.
Eur.Biophys.J., 49, 2020
1BG1
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BU of 1bg1 by Molmil
TRANSCRIPTION FACTOR STAT3B/DNA COMPLEX
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*TP*TP*CP*CP*CP*GP*TP*AP*AP*AP*TP*CP*T)-3'), PROTEIN (TRANSCRIPTION FACTOR STAT3B)
Authors:Becker, S, Groner, B, Muller, C.W.
Deposit date:1998-06-03
Release date:1999-01-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Three-dimensional structure of the Stat3beta homodimer bound to DNA.
Nature, 394, 1998
6FCG
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BU of 6fcg by Molmil
Crystal structure of an endo-laminarinase from Formosa Hel1_33_131
Descriptor: CALCIUM ION, Glycoside hydrolase, GH17 family
Authors:Becker, S, Robb, C.S, Hehemann, J.H.
Deposit date:2017-12-20
Release date:2018-12-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms.
ISME J, 12, 2018
8BGB
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BU of 8bgb by Molmil
Structure of the citrate-bound extracytoplasmic PAS domain of histidine kinase CitA from Geobacillus thermodenitrificans
Descriptor: CITRATE ANION, Histidine kinase, SODIUM ION
Authors:Becker, S.
Deposit date:2022-10-27
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the citrate-bound extracytoplasmic PAS domain of histidine kinase CitA from Geobacillus thermodenitrificans
To Be Published
8BIY
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BU of 8biy by Molmil
Citrate-free extracytoplasmic PAS domain mutant R93A of sensor histidine kinase CitA from Geobacillus thermodenitrificans
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, Histidine kinase, ...
Authors:Becker, S.
Deposit date:2022-11-02
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Citrate-free extracytoplasmic PAS domain mutant R93A of sensor histidine kinase CitA from Geobacillus thermodenitrificans
To Be Published
8BJP
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BU of 8bjp by Molmil
The N288D mutant cytoplasmic PAS domain of Geobacillus thermodenitrificans histidine kinase CitA
Descriptor: MAGNESIUM ION, cytoplasmic PAS domain of CitA from Geobacillus thermodenitrificans
Authors:Becker, S.
Deposit date:2022-11-04
Release date:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The N288D mutant cytoplasmic PAS domain of Geobacillus thermodenitrificans histidine kinase CitA
To Be Published
5FQ1
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BU of 5fq1 by Molmil
Structure of the cytoplasmic PAS domain of the Geobacillus thermodenitrificans histidine kinase CitA
Descriptor: GLYCEROL, HISTIDINE KINASE, PHOSPHATE ION
Authors:Schomburg, B, Giller, K, Becker, S.
Deposit date:2015-12-03
Release date:2017-01-11
Last modified:2017-03-01
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Cryogenic optical localization provides 3D protein structure data with Angstrom resolution.
Nat. Methods, 14, 2017
2XI8
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BU of 2xi8 by Molmil
High resolution structure of native CylR2
Descriptor: GLYCEROL, PUTATIVE TRANSCRIPTION REGULATOR
Authors:Gruene, T, Cho, M.-K, Karyagina, I, Kim, H.-Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S.
Deposit date:2010-06-28
Release date:2011-02-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy.
J.Biomol.NMR, 49, 2011
2KOX
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BU of 2kox by Molmil
NMR residual dipolar couplings identify long range correlated motions in the backbone of the protein ubiquitin
Descriptor: Ubiquitin
Authors:Fenwick, R.B, Richter, B, Lee, D, Walter, K.F.A, Milovanovic, D, Becker, S, Lakomek, N.A, Griesinger, C, Salvatella, X.
Deposit date:2009-10-02
Release date:2011-06-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Weak Long-Range Correlated Motions in a Surface Patch of Ubiquitin Involved in Molecular Recognition
J.Am.Chem.Soc., 2011
6I42
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BU of 6i42 by Molmil
Structure of the alpha-Synuclein PreNAC/Cyclophilin A-complex
Descriptor: Alpha-synuclein, Peptidyl-prolyl cis-trans isomerase A
Authors:Favretto, F, Zweckstetter, M, Becker, S.
Deposit date:2018-11-08
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:The Molecular Basis of the Interaction of Cyclophilin A with alpha-Synuclein.
Angew.Chem.Int.Ed.Engl., 59, 2020
5NWX
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BU of 5nwx by Molmil
Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6
Descriptor: Nuclear receptor coactivator 1, Signal transducer and activator of transcription 6
Authors:Russo, L, Giller, K, Pfitzner, E, Griesinger, C, Becker, S.
Deposit date:2017-05-08
Release date:2017-12-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6.
Sci Rep, 7, 2017
5JDP
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BU of 5jdp by Molmil
E73V mutant of the human voltage-dependent anion channel
Descriptor: Voltage-dependent anion-selective channel protein 1
Authors:Jaremko, M, Jaremko, L, Villinger, S, Schmidt, C, Giller, K, Griesinger, C, Becker, S, Zweckstetter, M.
Deposit date:2016-04-17
Release date:2016-08-10
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:High-Resolution NMR Determination of the Dynamic Structure of Membrane Proteins.
Angew.Chem.Int.Ed.Engl., 55, 2016
2Y8I
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BU of 2y8i by Molmil
Structural basis for the allosteric interference of myosin function by mutants G680A and G680V of Dictyostelium myosin-2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MYOSIN-2 HEAVY CHAIN
Authors:Preller, M, Bauer, S, Adamek, N, Fujita-Becker, S, Fedorov, R, Geeves, M.A, Manstein, D.J.
Deposit date:2011-02-07
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.132 Å)
Cite:Structural Basis for the Allosteric Interference of Myosin Function by Reactive Thiol Region Mutations G680A and G680V.
J.Biol.Chem., 286, 2011
2Y9E
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BU of 2y9e by Molmil
Structural basis for the allosteric interference of myosin function by mutants G680A and G680V of Dictyostelium myosin-2
Descriptor: MYOSIN-2
Authors:Preller, M, Bauer, S, Adamek, N, Fujita-Becker, S, Fedorov, R, Geeves, M.A, Manstein, D.J.
Deposit date:2011-02-14
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.397 Å)
Cite:Structural Basis for the Allosteric Interference of Myosin Function by Reactive Thiol Region Mutations G680A and G680V.
J.Biol.Chem., 286, 2011
2Y0R
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BU of 2y0r by Molmil
Structural basis for the allosteric interference of myosin function by mutants G680A and G680V of Dictyostelium myosin-2
Descriptor: MYOSIN-2 HEAVY CHAIN
Authors:Preller, M, Bauer, S, Adamek, N, Fujita-Becker, S, Fedorov, R, Geeves, M.A, Manstein, D.J.
Deposit date:2010-12-07
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural Basis for the Allosteric Interference of Myosin Function by Reactive Thiol Region Mutations G680A and G680V.
J.Biol.Chem., 286, 2011
5NWM
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BU of 5nwm by Molmil
Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6
Descriptor: Nuclear receptor coactivator 1, Signal transducer and activator of transcription 6
Authors:Russo, L, Becker, S, Griesinger, C.
Deposit date:2017-05-06
Release date:2017-12-06
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6.
Sci Rep, 7, 2017
4UN2
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BU of 4un2 by Molmil
Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin
Descriptor: UBIQUITIN, UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2
Authors:Michielssens, S, Peters, J.H, Ban, D, Pratihar, S, Seeliger, D, Sharma, M, Giller, K, Sabo, T.M, Becker, S, Lee, D, Griesinger, C, de Groot, B.L.
Deposit date:2014-05-23
Release date:2014-08-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:A Designed Conformational Shift to Control Protein Binding Specificity.
Angew.Chem.Int.Ed.Engl., 53, 2014
7F1M
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BU of 7f1m by Molmil
Marburg virus nucleoprotein-RNA complex
Descriptor: Nucleoprotein, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3')
Authors:Fujita, F.Y, Sugita, Y, Takamatsu, Y, Houri, K, Muramoto, Y, Nakano, M, Tsunoda, Y, Igarashi, M, Becker, S, Noda, T.
Deposit date:2021-06-09
Release date:2022-03-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insight into Marburg virus nucleoprotein-RNA complex formation.
Nat Commun, 13, 2022
2XIU
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BU of 2xiu by Molmil
High resolution structure of MTSL-tagged CylR2.
Descriptor: CYLR2, GLYCEROL, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
Authors:Gruene, T, Cho, M.-K, Karyagina, I, Kim, H.-Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S.
Deposit date:2010-07-01
Release date:2011-02-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy.
J.Biomol.NMR, 49, 2011
2XJ3
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BU of 2xj3 by Molmil
High resolution structure of the T55C mutant of CylR2.
Descriptor: CYLR2 SYNONYM CYTOLYSIN REPRESSOR 2, GLYCEROL
Authors:Gruene, T, Cho, M.K, Karyagina, I, Kim, H.Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S.
Deposit date:2010-07-02
Release date:2011-02-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy.
J.Biomol.NMR, 49, 2011
3UFE
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BU of 3ufe by Molmil
Structure of transcriptional antiterminator (BGLG-family) at 1.5 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Grosse, C, Himmel, S, Becker, S, Sheldrick, G.M, Uson, I.
Deposit date:2011-11-01
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of transcriptional antiterminator (BGLG-family) at 1.5 A resolution
To be Published
5ABS
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BU of 5abs by Molmil
CRYSTAL STRUCTURE OF THE C-TERMINAL COILED-COIL DOMAIN OF CIN85 IN SPACE GROUP P321
Descriptor: SH3 DOMAIN-CONTAINING KINASE-BINDING PROTEIN 1, ZINC ION
Authors:Wong, L, Habeck, M, Griesinger, C, Becker, S.
Deposit date:2015-08-07
Release date:2016-07-13
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The Adaptor Protein Cin85 Assembles Intracellular Signaling Clusters for B Cell Activation.
Sci.Signal., 9, 2016
6EHM
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BU of 6ehm by Molmil
Model of the Ebola virus nucleocapsid subunit from recombinant virus-like particles
Descriptor: Membrane-associated protein VP24, Nucleoprotein
Authors:Wan, W, Kolesnikova, L, Clarke, M, Koehler, A, Noda, T, Becker, S, Briggs, J.A.G.
Deposit date:2017-09-13
Release date:2017-11-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (7.3 Å)
Cite:Structure and assembly of the Ebola virus nucleocapsid.
Nature, 551, 2017
6EHL
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BU of 6ehl by Molmil
Model of the Ebola virus nucleoprotein in recombinant nucleocapsid-like assemblies
Descriptor: Nucleoprotein
Authors:Wan, W, Kolesnikova, L, Clarke, M, Koehler, A, Noda, T, Becker, S, Briggs, J.A.G.
Deposit date:2017-09-13
Release date:2017-11-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Structure and assembly of the Ebola virus nucleocapsid.
Nature, 551, 2017

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