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PDB: 103 results

6WH6
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BU of 6wh6 by Molmil
Crystal structure of human sulfide quinone oxidoreductase in complex with coenzyme Q (cyanide soaked)
Descriptor: CYANIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Sulfide:quinone oxidoreductase, ...
Authors:Banerjee, R, Cho, U.S, Moon, S.
Deposit date:2020-04-07
Release date:2021-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Dismantling and Rebuilding the Trisulfide Cofactor Demonstrates Its Essential Role in Human Sulfide Quinone Oxidoreductase.
J.Am.Chem.Soc., 142, 2020
4DVD
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BU of 4dvd by Molmil
Crystal structure of the disulphide linked knotted homodimer of Psu
Descriptor: Polarity suppression protein
Authors:Banerjee, R, Nath, S, Sen, U.
Deposit date:2012-02-23
Release date:2012-11-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:The first structure of polarity suppression protein, Psu from enterobacteria phage P4, reveals a novel fold and a knotted dimer
J.Biol.Chem., 287, 2012
6OI5
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BU of 6oi5 by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Sulfide:quinone oxidoreductase, mitochondrial
Authors:Banerjee, R, Cho, U.S, Kim, H, Moon, S.
Deposit date:2019-04-08
Release date:2020-01-15
Method:X-RAY DIFFRACTION (2.811 Å)
Cite:A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation.
Cell Chem Biol, 26, 2019
6OI6
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BU of 6oi6 by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q (sulfide soaked)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Sulfide:quinone oxidoreductase, mitochondrial, ...
Authors:Banerjee, R, Cho, U.S, Kim, H, Moon, S.
Deposit date:2019-04-08
Release date:2020-01-15
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation.
Cell Chem Biol, 26, 2019
6OIB
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BU of 6oib by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, HYDROSULFURIC ACID, ...
Authors:Banerjee, R, Cho, U.S, Kim, H, Moon, S.
Deposit date:2019-04-09
Release date:2020-01-15
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation.
Cell Chem Biol, 26, 2019
6OIC
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BU of 6oic by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q (sulfite soaked)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, HYDROSULFURIC ACID, Sulfide:quinone oxidoreductase, ...
Authors:Banerjee, R, Cho, U.S, Kim, H, Moon, S.
Deposit date:2019-04-09
Release date:2020-01-15
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation.
Cell Chem Biol, 26, 2019
2PEL
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BU of 2pel by Molmil
PEANUT LECTIN
Descriptor: CALCIUM ION, MANGANESE (II) ION, PEANUT LECTIN, ...
Authors:Banerjee, R, Das, K, Ravishankar, R, Suguna, K, Surolia, A, Vijayan, M.
Deposit date:1995-08-23
Release date:1996-12-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Conformation, protein-carbohydrate interactions and a novel subunit association in the refined structure of peanut lectin-lactose complex.
J.Mol.Biol., 259, 1996
3RX6
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BU of 3rx6 by Molmil
Crystal structure of Polarity Suppression protein from Enterobacteria phage P4
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, IODIDE ION, MERCURY (II) ION, ...
Authors:Banerjee, R, Nath, S, Khamrui, S, Sen, R, Sen, U.
Deposit date:2011-05-10
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.039 Å)
Cite:The first structure of polarity suppression protein, Psu from enterobacteria phage P4, reveals a novel fold and a knotted dimer
J.Biol.Chem., 287, 2012
6L2B
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BU of 6l2b by Molmil
Crystal structure of cyclophilin mutant I164M from Leishmania donovani at 2.65 angstrom resolution
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Ghosh, S, Biswas, G, Datta, A.K, Banerjee, R.
Deposit date:2019-10-03
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of cyclophilin mutant I164M from Leishmania donovani at 2.65 angstrom resolution.
To Be Published
2QM7
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BU of 2qm7 by Molmil
MeaB, A Bacterial Homolog of MMAA, Bound to GDP
Descriptor: GTPase/ATPase, GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION
Authors:Hubbard, P.A, Padovani, D, Labunska, T, Mahlstedt, S.A, Banerjee, R, Drennan, C.L.
Deposit date:2007-07-14
Release date:2007-08-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure and mutagenesis of the metallochaperone MeaB: insight into the causes of methylmalonic aciduria.
J.Biol.Chem., 282, 2007
8HPT
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BU of 8hpt by Molmil
Structure of C5a-pep bound mouse C5aR1 in complex with Go
Descriptor: Antibody fragment ScFv16, C5a anaphylatoxin chemotactic receptor 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Saha, S, Maharana, J, Yadav, M.K, Sarma, P, Chami, M, Banerjee, R, Shukla, A.K.
Deposit date:2022-12-13
Release date:2023-10-18
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structure of a GPCR-G protein in complex with a synthetic peptide agonist
Cell(Cambridge,Mass.), 2023
8HQC
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BU of 8hqc by Molmil
Structure of a GPCR-G protein in complex with a natural peptide agonist
Descriptor: Antibody fragment, C5a anaphylatoxin, C5a anaphylatoxin chemotactic receptor 1, ...
Authors:Saha, S, Maharana, J, Yadav, M.K, Sarma, P, Chami, M, Banerjee, R, Shukla, A.K.
Deposit date:2022-12-13
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.89 Å)
Cite:Structure of a GPCR-G protein in complex with a synthetic peptide agonist
Cell(Cambridge,Mass.), 2023
8I0Z
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BU of 8i0z by Molmil
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1 (Local refine)
Descriptor: Beta-arrestin-2, C5a anaphylatoxin chemotactic receptor 1, Fab30 Heavy Chain, ...
Authors:Maharana, J, Sarma, P, Yadav, M.K, Banerjee, R, Shukla, A.K.
Deposit date:2023-01-12
Release date:2023-05-17
Method:ELECTRON MICROSCOPY (4.33 Å)
Cite:Structure of beta-arrestin in complex with a phosphopeptide
Mol.Cell, 2023
8I10
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BU of 8i10 by Molmil
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Vasopressin V2 receptor, V2R (Local refine)
Descriptor: Beta-arrestin-2, Fab30 Heavy Chain, Fab30 Light Chain, ...
Authors:Maharana, J, Sarma, P, Yadav, M.K, Banerjee, R, Shukla, A.K.
Deposit date:2023-01-12
Release date:2023-05-17
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Structure of beta-arrestin in complex with a phosphopeptide
Mol.Cell, 2023
8I0N
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BU of 8i0n by Molmil
Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1 (Local refine)
Descriptor: Beta-arrestin-1, C5a anaphylatoxin chemotactic receptor 1, Fab30 heavy chain, ...
Authors:Maharana, J, Sarma, P, Yadav, M.K, Banerjee, R, Shukla, A.K.
Deposit date:2023-01-11
Release date:2023-05-17
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structure of beta-arrestin in complex with a phosphopeptide
Mol.Cell, 2023
8I0Q
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BU of 8i0q by Molmil
Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C-X-C chemokine receptor type 4, CXCR4 (Local refine)
Descriptor: Beta-arrestin-1, C-X-C chemokine receptor type 4, Fab30 Heavy Chain, ...
Authors:Maharana, J, Sarma, P, Yadav, M.K, Banerjee, R, Shukla, A.K.
Deposit date:2023-01-11
Release date:2023-05-17
Method:ELECTRON MICROSCOPY (4.45 Å)
Cite:Structure of beta-arrestin in complex with a phosphopeptide
Mol.Cell, 2023
3BT8
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BU of 3bt8 by Molmil
Crystal Structure of Mutant Cyclophilin (R147A) from Leishmania donovani
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Venugopal, V, Sen, B, Datta, A.K, Banerjee, R.
Deposit date:2007-12-28
Release date:2008-01-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Mutant Cyclophilin from Leishmania Donovani
To be Published
8STW
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BU of 8stw by Molmil
K384N HUMAN CYSTATHIONINE BETA-SYNTHASE (delta 411-551)
Descriptor: Cystathionine beta-synthase, K384N variant, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mascarenhas, R, Roman, J, Banerjee, R.
Deposit date:2023-05-11
Release date:2023-11-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Disease-causing cystathionine beta-synthase linker mutations impair allosteric regulation.
J.Biol.Chem., 299, 2023
1JAC
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BU of 1jac by Molmil
A NOVEL MODE OF CARBOHYDRATE RECOGNITION IN JACALIN, A MORACEAE PLANT LECTIN WITH A BETA-PRISM
Descriptor: JACALIN, methyl alpha-D-galactopyranoside
Authors:Sankaranarayanan, R, Sekar, K, Banerjee, R, Sharma, V, Surolia, A, Vijayan, M.
Deposit date:1996-05-22
Release date:1997-06-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:A novel mode of carbohydrate recognition in jacalin, a Moraceae plant lectin with a beta-prism fold.
Nat.Struct.Biol., 3, 1996
6X8Z
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BU of 6x8z by Molmil
Crystal structure of N-truncated human B12 chaperone CblD(C262S)-thiolato-cob(III)alamin complex (108-296)
Descriptor: COBALAMIN, Methylmalonic aciduria and homocystinuria type D protein, mitochondrial
Authors:Mascarenhas, R, Li, Z, Koutmos, M, Banerjee, R.
Deposit date:2020-06-02
Release date:2020-09-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An Interprotein Co-S Coordination Complex in the B 12 -Trafficking Pathway.
J.Am.Chem.Soc., 142, 2020
8DHK
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BU of 8dhk by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase K207E
Descriptor: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Mascarenhas, R.N, Ludlum, A, Banerjee, R.
Deposit date:2022-06-27
Release date:2023-07-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Sulfide oxidation in human sulfide quinone oxidoreductase is enthalpically driven: Contributions of the Lys-207 general base
To Be Published
8DYL
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BU of 8dyl by Molmil
Crystal structure of human methylmalonyl-CoA mutase bound to aquocobalamin
Descriptor: COBALAMIN, GLYCEROL, Methylmalonyl-CoA mutase, ...
Authors:Mascarenhas, R.N, Gouda, H, Banerjee, R.
Deposit date:2022-08-04
Release date:2023-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Bivalent molecular mimicry by ADP protects metal redox state and promotes coenzyme B 12 repair.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DYJ
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BU of 8dyj by Molmil
Crystal structure of human methylmalonyl-CoA mutase in complex with ADP and cob(II)alamin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, COBALAMIN, Methylmalonyl-CoA mutase, ...
Authors:Mascarenhas, R.N, Gouda, H, Banerjee, R.
Deposit date:2022-08-04
Release date:2023-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bivalent molecular mimicry by ADP protects metal redox state and promotes coenzyme B 12 repair.
Proc.Natl.Acad.Sci.USA, 120, 2023
2HAQ
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BU of 2haq by Molmil
Crystal Structure of Cyclophilin A from Leishmania Donovani
Descriptor: Cyclophilin
Authors:Venugopal, V, Sen, B, Datta, A.K, Banerjee, R.
Deposit date:2006-06-13
Release date:2006-06-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure of cyclophilin from Leishmania donovani at 1.97 A resolution.
Acta Crystallogr.,Sect.F, 63, 2007
3EOV
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BU of 3eov by Molmil
Crystal structure of cyclophilin from Leishmania donovani ligated with cyclosporin A
Descriptor: CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Authors:Venugopal, V, Dasgupta, D, Datta, A.K, Banerjee, R.
Deposit date:2008-09-29
Release date:2008-11-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Cyclophilin from Leishmania Donovani Bound to Cyclosporin at 2.6 A Resolution: Correlation between Structure and Thermodynamic Data.
Acta Crystallogr.,Sect.D, 65, 2009

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