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2QC3
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BU of 2qc3 by Molmil
Crystal structure of MCAT from Mycobacterium tuberculosis
Descriptor: ACETIC ACID, Malonyl CoA-acyl carrier protein transacylase
Authors:Li, Z, Huang, Y, Ge, J, Bartlam, M, Wang, H, Rao, Z.
Deposit date:2007-06-19
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of MCAT from Mycobacterium tuberculosis Reveals Three New Catalytic Models.
J.Mol.Biol., 371, 2007
1QBY
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BU of 1qby by Molmil
THE SOLUTION STRUCTURE OF A BAY-REGION 1R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor: 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL, 5'-D(*CP*GP*GP*AP*CP*(BZA)AP*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP* G)-3'
Authors:Li, Z, Mao, H, Kim, H.-Y, Tamura, P.J, Harris, C.M, Harris, T.M, Stone, M.P.
Deposit date:1999-04-27
Release date:1999-05-06
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Intercalation of the (-)-(1R,2S,3R, 4S)-N6-[1-benz[a]anthracenyl]-2'-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence.
Biochemistry, 38, 1999
7C23
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BU of 7c23 by Molmil
Crystal structure of CrmE10, a SGNH-hydrolase family esterase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Li, Z, Li, J.
Deposit date:2020-05-07
Release date:2020-05-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases.
Biotechnol Biofuels, 13, 2020
7C29
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BU of 7c29 by Molmil
Esterase CrmE10 mutant-D178A
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Li, Z, Li, J.
Deposit date:2020-05-07
Release date:2020-05-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases.
Biotechnol Biofuels, 13, 2020
6U7H
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BU of 6u7h by Molmil
Cryo-EM structure of the HCoV-229E spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, Z, Benlekbir, S, Rubinstein, J.L, Rini, J.M.
Deposit date:2019-09-02
Release date:2019-11-13
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
8CWY
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BU of 8cwy by Molmil
Accurate computational design of genetically encoded 3D protein crystals
Descriptor: T32-15-1, T32-15-2
Authors:Li, Z, Borst, A.J, Baker, D.
Deposit date:2022-05-19
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Accurate computational design of three-dimensional protein crystals.
Nat Mater, 22, 2023
7C2A
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BU of 7c2a by Molmil
Crystal structure of AlinE4, a SGNH-hydrolase family esterase
Descriptor: ACETATE ION, CADMIUM ION, SGNH-hydrolase family esterase
Authors:Li, Z, Li, J.
Deposit date:2020-05-07
Release date:2020-05-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:C-terminal swapped dimers revealed a new catalytic mechanism of SGNH-hydrolase family esterases
To Be Published
1I7V
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BU of 1i7v by Molmil
THE SOLUTION STRUCTURE OF A BAY REGION 1R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor: 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL, 5'-D(*CP*GP*GP*AP*CP*AP*(BZA)AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3'
Authors:Li, Z, Tamura, P.J, Wilkinson, A.S, Harris, C.M, Harris, T.M, Stone, M.P.
Deposit date:2001-03-10
Release date:2001-03-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Intercalation of the (1R,2S,3R,4S)-N6-[1-(1,2,3,4-tetrahydro-2,3,4-trihydroxybenz[a]anthracenyl)]-2'-deoxyadenosyl adduct in the N-ras codon 61 sequence: DNA sequence effects
Biochemistry, 40, 2001
1DJD
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BU of 1djd by Molmil
THE SOLUTION STRUCTURE OF A NON-BAY REGION 11R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor: 8,9,10,11-TETRAHYDRO-BENZO[A]ANTHRACENE-8,9,10-TRIOL, DNA(5'-D(*CT*GT*GT*AT*CT*AT*AT*GT*AT*AT*G)-3'), DNA(5'-D(*CT*TT*TT*CT*TT*TT*GT*TT*CT*CT*G)-3')
Authors:Li, Z, Kim, H.Y, Tamura, P.J, Harris, C.M, Harris, T.M, Stone, M.P.
Deposit date:1999-12-02
Release date:1999-12-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Role of a polycyclic aromatic hydrocarbon bay region ring in modulating DNA adduct structure: the non-bay region (8S,9R,10S, 11R)-N(6)-[11-(8,9,10,11-tetrahydro-8,9, 10-trihydroxybenz[a]anthracenyl)]-2' -deoxyadenosyl adduct in codon 61 of the human N-ras protooncogene
Biochemistry, 38, 1999
1DL4
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BU of 1dl4 by Molmil
THE SOLUTION STRUCTURE OF A BAY-REGION 1S-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor: 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL, DNA (5'-D(*CP*GP*GP*AP*CP*(BZA)AP*AP*GP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3')
Authors:Li, Z, Kim, H.-Y, Tamura, P.J, Harris, C.M, Harris, T.M, Stone, M.P.
Deposit date:1999-12-08
Release date:2000-01-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Intercalation of the (1S,2R,3S,4R)-N6-[1-(1,2,3,4-tetrahydro-2,3, 4-trihydroxybenz[a]anthracenyl)]-2'-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence.
Biochemistry, 38, 1999
1YW5
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BU of 1yw5 by Molmil
Peptidyl-prolyl isomerase ESS1 from Candida albicans
Descriptor: peptidyl prolyl cis/trans isomerase
Authors:Li, Z, Li, H, Devasahayam, G, Gemmill, T, Chaturvedi, V, Hanes, S.D, Van Roey, P.
Deposit date:2005-02-17
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of the Candida albicans Ess1 Prolyl Isomerase Reveals a Well-Ordered Linker that Restricts Domain Mobility
Biochemistry, 44, 2005
6MWY
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BU of 6mwy by Molmil
The Prp8 intein of Cryptococcus gattii
Descriptor: Pre-mRNA-processing-splicing factor 8
Authors:Li, Z, Fu, B, Green, C.M, Lang, Y, Zhang, J, Oven, T.S, Li, X, Callahan, B.P, Chaturvedi, S, Belfort, M, Liao, G, Li, H.
Deposit date:2018-10-30
Release date:2019-11-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.594 Å)
Cite:Cisplatin protects mice from challenge ofCryptococcus neoformansby targeting the Prp8 intein.
Emerg Microbes Infect, 8, 2019
6MYL
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BU of 6myl by Molmil
The Prp8 intein-cisplatin complex
Descriptor: PLATINUM (II) ION, Pre-mRNA-processing-splicing factor 8
Authors:Li, Z, Li, H.
Deposit date:2018-11-01
Release date:2019-11-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Cisplatin protects mice from challenge ofCryptococcus neoformansby targeting the Prp8 intein.
Emerg Microbes Infect, 8, 2019
3KYS
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BU of 3kys by Molmil
Crystal structure of human YAP and TEAD complex
Descriptor: 65 kDa Yes-associated protein, Transcriptional enhancer factor TEF-1
Authors:Li, Z, Zhao, B, Wang, P, Chen, F, Dong, Z, Yang, H, Guan, K.L, Xu, Y.
Deposit date:2009-12-07
Release date:2010-02-23
Last modified:2020-10-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the YAP and TEAD complex
Genes Dev., 24, 2010
7BR8
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BU of 7br8 by Molmil
Epstein-Barr virus, C5 penton vertex, CATC absent.
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Li, Z, Yu, X.
Deposit date:2020-03-26
Release date:2020-09-30
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BSI
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BU of 7bsi by Molmil
Epstein-Barr virus, one asymmetric unit structure of the icosahedral tegumented capsid
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Li, Z, Yu, X.
Deposit date:2020-03-30
Release date:2020-09-30
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BQT
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BU of 7bqt by Molmil
Epstein-Barr virus, C12 portal dodecamer
Descriptor: Portal protein
Authors:Li, Z, Yu, X.
Deposit date:2020-03-25
Release date:2020-09-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BQX
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BU of 7bqx by Molmil
Epstein-Barr virus, C5 portal vertex
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Li, Z, Yu, X.
Deposit date:2020-03-25
Release date:2020-09-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BR7
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BU of 7br7 by Molmil
Epstein-Barr virus, C1 portal-proximal penton vertex, CATC binding
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Li, Z, Yu, X.
Deposit date:2020-03-26
Release date:2020-09-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
8K43
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BU of 8k43 by Molmil
In situ structure of RNA-dependent RNA polymerase in full BAV particles
Descriptor: RNA-directed RNA polymerase (Fragment), VP2
Authors:Li, Z, Cao, S.
Deposit date:2023-07-17
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
8K42
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BU of 8k42 by Molmil
Structure of full Banna virus
Descriptor: VP10, VP2, VP4, ...
Authors:Li, Z, Cao, S.
Deposit date:2023-07-17
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
8K49
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BU of 8k49 by Molmil
Structure of partial Banna virus
Descriptor: VP10, VP2, VP4, ...
Authors:Li, Z, Cao, S.
Deposit date:2023-07-17
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
8K4A
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BU of 8k4a by Molmil
Structure of Banna virus core
Descriptor: VP10, VP2, VP8
Authors:Li, Z, Cao, S.
Deposit date:2023-07-17
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
8K44
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BU of 8k44 by Molmil
Structure of VP9 in Banna virus
Descriptor: VP9
Authors:Li, Z, Cao, S.
Deposit date:2023-07-17
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
5JFK
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BU of 5jfk by Molmil
Crystal structure of a TDR receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat receptor-like protein kinase TDR
Authors:Li, Z, Xu, G.
Deposit date:2016-04-19
Release date:2017-03-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.647 Å)
Cite:Crystal structure of a TDR receptor
To Be Published

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