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2HNB
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BU of 2hnb by Molmil
Solution Structure of a bacterial holo-flavodoxin
Descriptor: Protein mioC
Authors:Hu, Y, Jin, C.
Deposit date:2006-07-12
Release date:2006-09-19
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structures and backbone dynamics of a flavodoxin MioC from Escherichia coli in both Apo- and Holo-forms: implications for cofactor binding and electron transfer
J.Biol.Chem., 281, 2006
4Q94
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BU of 4q94 by Molmil
human RPRD1B CID in complex with a RPB1-CTD derived Ser2 phosphorylated peptide
Descriptor: Regulation of nuclear pre-mRNA domain-containing protein 1B, SULFATE ION, UNKNOWN ATOM OR ION, ...
Authors:Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
Deposit date:2014-04-29
Release date:2014-06-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.
Nat.Struct.Mol.Biol., 21, 2014
2WKK
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BU of 2wkk by Molmil
Identification of the glycan target of the nematotoxic fungal galectin CGL2 in Caenorhabditis elegans
Descriptor: GALECTIN-2, GLYCEROL, MAGNESIUM ION, ...
Authors:Butschi, A, Titz, A, Waelti, M, Olieric, V, Paschinger, K, Xiaoqiang, G, Seeberger, P.H, Wilson, I.B.H, Aebi, M, Hengartner, M.O, Kuenzler, M.
Deposit date:2009-06-14
Release date:2010-01-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Caenorhabditis Elegans N-Glycan Core Beta-Galactoside Confers Sensitivity Towards Nematotoxic Fungal Galectin Cgl2.
Plos Pathog., 6, 2010
8EFN
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BU of 8efn by Molmil
Structure of Sp-STING3 from Stylophora pistillata coral in complex with 3',3'-cGAMP
Descriptor: 1,2-ETHANEDIOL, 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, Stimulator of interferon genes protein
Authors:Li, Y, Slavik, K.M, Morehouse, B.R, Mears, K, Kranzusch, P.J.
Deposit date:2022-09-08
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8EFM
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BU of 8efm by Molmil
Structure of coral STING receptor from Stylophora pistillata in complex with 2',3'-cGAMP
Descriptor: SULFATE ION, Stimulator of interferon genes protein, cGAMP
Authors:Li, Y, Slavik, K.M, Morehouse, B.R, Mears, K, Kranzusch, P.J.
Deposit date:2022-09-08
Release date:2023-07-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8WIU
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BU of 8wiu by Molmil
Bromodomain and Extra-terminal Domain (BET) BRD4
Descriptor: 7-[5-[1-(cyclopropylmethyl)-3,5-dimethyl-pyrazol-4-yl]pyridin-3-yl]-1~{H}-imidazo[4,5-b]pyridine, Isoform C of Bromodomain-containing protein 4
Authors:Cao, D, Zhiyan, D, Xiong, B.
Deposit date:2023-09-25
Release date:2024-01-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Discovery of a brain-permeable bromodomain and extra terminal domain (BET) inhibitor with selectivity for BD1 for the treatment of multiple sclerosis.
Eur.J.Med.Chem., 265, 2023
4QQ6
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BU of 4qq6 by Molmil
Crystal Structure of tudor domain of SMN1 in complex with a small organic molecule
Descriptor: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, Survival motor neuron protein, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Iqbal, A, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-06-26
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
4QQD
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BU of 4qqd by Molmil
Crystal Structure of tandem tudor domains of UHRF1 in complex with a small organic molecule
Descriptor: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, E3 ubiquitin-protein ligase UHRF1, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Iqbal, A, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-06-27
Release date:2014-08-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
1Z2F
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BU of 1z2f by Molmil
solution structure of CfAFP-501
Descriptor: Antifreeze Protein Isoform 501
Authors:Li, C, Jin, C.
Deposit date:2005-03-08
Release date:2005-10-11
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution Structure of an Antifreeze Protein CfAFP-501 from Choristoneura fumiferana
J.Biomol.Nmr, 32, 2005
7YMK
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BU of 7ymk by Molmil
Estrogen Receptor Alpha Ligand Binding Domain C381S C417S Y537S Mutant in Complex with an Covalent Selective Estrogen Receptor Degrader 29c and GRIP Peptide
Descriptor: DI(HYDROXYETHYL)ETHER, Estrogen receptor, Grip peptide, ...
Authors:Min, J, Hu, H.B, Yang, Y, Dong, C.E, Zhou, H.B, Chen, C.-C, Guo, R.-T.
Deposit date:2022-07-28
Release date:2023-05-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Discovery of novel covalent selective estrogen receptor degraders against endocrine-resistant breast cancer.
Acta Pharm Sin B, 13, 2023
7KH1
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BU of 7kh1 by Molmil
Baseplate Complex for Myoviridae Phage XM1
Descriptor: baseplate organization protein, gp11, baseplate stabilizing protein, ...
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-19
Release date:2021-10-27
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7KLN
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BU of 7kln by Molmil
Myoviridae Phage XM1 Neck Region (12-fold)
Descriptor: Head completion protein, gp1, Portal protein
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-30
Release date:2021-11-03
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7KJK
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BU of 7kjk by Molmil
The Neck region of Phage XM1 (6-fold symmetry)
Descriptor: Collar spike protein, Head completion protein, Tail sheath protein, ...
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-26
Release date:2021-11-03
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7JS6
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BU of 7js6 by Molmil
Solution NMR structure of des-citrulassin F
Descriptor: des-citrulassin F
Authors:Harris, L.A, Mitchell, D.A.
Deposit date:2020-08-13
Release date:2020-12-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Reactivity-Based Screening for Citrulline-Containing Natural Products Reveals a Family of Bacterial Peptidyl Arginine Deiminases.
Acs Chem.Biol., 15, 2020
7KMX
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BU of 7kmx by Molmil
The capsid of Myoviridae Phage XM1
Descriptor: Major capsid protein, Minor capsid protein
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-11-03
Release date:2021-11-10
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
4ZBW
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BU of 4zbw by Molmil
Crystal structure of death effector domain of Caspase8 in Homo Sapiens
Descriptor: Caspase-8
Authors:Shen, C, Wang, T, Quan, J.
Deposit date:2015-04-15
Release date:2015-07-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the death effector domains of caspase-8
Biochem.Biophys.Res.Commun., 463, 2015
6J72
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BU of 6j72 by Molmil
Crystal structure of IniA from Mycobacterium smegmatis with GTP bound
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Isoniazid inducible gene protein IniA, L(+)-TARTARIC ACID, ...
Authors:Wang, M.F, Guo, X.Y, Hu, J.J, Li, J, Rao, Z.H.
Deposit date:2019-01-16
Release date:2019-09-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mycobacterial dynamin-like protein IniA mediates membrane fission.
Nat Commun, 10, 2019
6J73
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BU of 6j73 by Molmil
Crystal structure of IniA from Mycobacterium smegmatis
Descriptor: Isoniazid inducible gene protein IniA
Authors:Wang, M.F, Guo, X.Y, Hu, J.J, Li, J, Rao, Z.H.
Deposit date:2019-01-16
Release date:2019-09-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.211 Å)
Cite:Mycobacterial dynamin-like protein IniA mediates membrane fission.
Nat Commun, 10, 2019
5I35
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BU of 5i35 by Molmil
Structure of the Human mitochondrial kinase COQ8A R611K with AMPPNP (Cerebellar Ataxia and Ubiquinone Deficiency Through Loss of Unorthodox Kinase Activity)
Descriptor: Atypical kinase ADCK3, mitochondrial, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Bingman, C.A, Stefely, J.A, Pagliarini, D.J, Mitochondrial Protein Partnership (MPP)
Deposit date:2016-02-09
Release date:2016-08-17
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cerebellar Ataxia and Coenzyme Q Deficiency through Loss of Unorthodox Kinase Activity.
Mol.Cell, 63, 2016
5JJ7
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BU of 5jj7 by Molmil
Fic-1 (aa134 - 508 E274G) from C. elegans
Descriptor: Adenosine monophosphate-protein transferase FICD homolog, SULFATE ION
Authors:Cruz, V.E, Schwartz, T.U.
Deposit date:2016-04-22
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.749 Å)
Cite:Fic-1 (aa134 - 508 E274G) from C. elegans
To be published
5JJ6
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BU of 5jj6 by Molmil
Fic-1 (aa134 - 508) from C. elegans
Descriptor: Adenosine monophosphate-protein transferase FICD homolog, SULFATE ION
Authors:Cruz, V.E, Schwartz, T.U.
Deposit date:2016-04-22
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.907 Å)
Cite:Fic-1 dimer
To be published
4QC0
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BU of 4qc0 by Molmil
Crystal structure of human TLR8 in complex with XG-1-236
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-butyl-2H-pyrazolo[3,4-c]quinolin-4-amine, Toll-like receptor 8, ...
Authors:Tanji, H, Ohto, U, Shimizu, T.
Deposit date:2014-05-09
Release date:2014-10-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Determinants of Activity at Human Toll-like Receptors 7 and 8: Quantitative Structure-Activity Relationship (QSAR) of Diverse Heterocyclic Scaffolds
J.Med.Chem., 57, 2014
4QBZ
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BU of 4qbz by Molmil
Crystal structure of human TLR8 in complex with DS-802
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-butyl[1,3]oxazolo[4,5-c]quinolin-4-amine, ...
Authors:Tanji, H, Ohto, U, Shimizu, T.
Deposit date:2014-05-09
Release date:2014-10-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Determinants of Activity at Human Toll-like Receptors 7 and 8: Quantitative Structure-Activity Relationship (QSAR) of Diverse Heterocyclic Scaffolds
J.Med.Chem., 57, 2014
5GNU
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BU of 5gnu by Molmil
the structure of mini-MFN1 apo
Descriptor: Mitofusin-1
Authors:Yan, L, Yu, C, Ming, Z, Lou, Z, Rao, Z, Lou, J.
Deposit date:2016-07-25
Release date:2016-11-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (4.113 Å)
Cite:BDLP-like folding of Mitofusin 1
To Be Published
8K8J
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BU of 8k8j by Molmil
Cannabinoid Receptor 1 bound to Fenofibrate coupling MiniGsq and Nb35 Complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Tang, W.Q, Wang, T.X, Li, F.H, Wang, J.Y.
Deposit date:2023-07-30
Release date:2024-02-14
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Fenofibrate Recognition and G q Protein Coupling Mechanisms of the Human Cannabinoid Receptor CB1.
Adv Sci, 11, 2024

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PDB entries from 2024-05-01

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