Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3MTW
DownloadVisualize
BU of 3mtw by Molmil
Crystal structure of L-Lysine, L-Arginine carboxypeptidase Cc2672 from Caulobacter Crescentus CB15 complexed with N-methyl phosphonate derivative of L-Arginine
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, L-Arginine carboxypeptidase Cc2672, ...
Authors:Fedorov, A.A, Fedorov, E.V, Xiang, D.F, Raushel, F.M, Almo, S.C.
Deposit date:2010-05-01
Release date:2010-07-28
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Functional Identification and Structure Determination of Two Novel Prolidases from cog1228 in the Amidohydrolase Superfamily
Biochemistry, 49, 2010
3N2C
DownloadVisualize
BU of 3n2c by Molmil
Crystal structure of prolidase eah89906 complexed with n-methylphosphonate-l-proline
Descriptor: 1-[(R)-hydroxy(methyl)phosphoryl]-L-proline, PROLIDASE, ZINC ION
Authors:Patskovsky, Y, Xu, C, Sauder, J.M, Burley, S.K, Raushel, F.M, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-17
Release date:2010-06-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Functional identification and structure determination of two novel prolidases from cog1228 in the amidohydrolase superfamily .
Biochemistry, 49, 2010
3NEH
DownloadVisualize
BU of 3neh by Molmil
Crystal structure of the protein LMO2462 from Listeria monocytogenes complexed with ZN and phosphonate mimic of dipeptide L-Leu-D-Ala
Descriptor: (2R)-3-[(R)-[(1R)-1-amino-3-methylbutyl](hydroxy)phosphoryl]-2-methylpropanoic acid, Renal dipeptidase family protein, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Cummings, J, Raushel, F.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-06-08
Release date:2010-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.642 Å)
Cite:Crystal structure of the protein LMO2462 from Listeria monocytogenes complexed with ZN and phosphonate mimic of dipeptide L-Leu-D-Ala
To be Published
3O7U
DownloadVisualize
BU of 3o7u by Molmil
Crystal structure of Cytosine Deaminase from Escherichia Coli complexed with zinc and phosphono-cytosine
Descriptor: (2R)-2-amino-2,5-dihydro-1,5,2-diazaphosphinin-6(1H)-one 2-oxide, (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol, Cytosine deaminase, ...
Authors:Fedorov, A.A, Fedorov, E.V, Hall, R.S, Raushel, F.M, Almo, S.C.
Deposit date:2010-07-31
Release date:2011-06-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.708 Å)
Cite:Three-dimensional structure and catalytic mechanism of Cytosine deaminase.
Biochemistry, 50, 2011
3PNZ
DownloadVisualize
BU of 3pnz by Molmil
Crystal structure of the lactonase Lmo2620 from Listeria monocytogenes
Descriptor: GLYCEROL, PHOSPHATE ION, Phosphotriesterase family protein, ...
Authors:Fedorov, A.A, Fedorov, E.V, Xiang, D.F, Raushel, F.M, Almo, S.C.
Deposit date:2010-11-20
Release date:2011-11-23
Method:X-RAY DIFFRACTION (1.5983 Å)
Cite:Crystal structure of the lactonase Lmo2620 from Listeria monocytogenes
To be Published
1HZY
DownloadVisualize
BU of 1hzy by Molmil
HIGH RESOLUTION STRUCTURE OF THE ZINC-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA
Descriptor: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, FORMIC ACID, ...
Authors:Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H.
Deposit date:2001-01-26
Release date:2001-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta.
Biochemistry, 40, 2001
1I0B
DownloadVisualize
BU of 1i0b by Molmil
HIGH RESOLUTION STRUCTURE OF THE MANGANESE-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA
Descriptor: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, FORMIC ACID, ...
Authors:Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H.
Deposit date:2001-01-29
Release date:2001-04-04
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta.
Biochemistry, 40, 2001
1I0D
DownloadVisualize
BU of 1i0d by Molmil
HIGH RESOLUTION STRUCTURE OF THE ZINC/CADMIUM-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA
Descriptor: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, CADMIUM ION, ...
Authors:Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H.
Deposit date:2001-01-29
Release date:2001-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta.
Biochemistry, 40, 2001
1J79
DownloadVisualize
BU of 1j79 by Molmil
Molecular Structure of Dihydroorotase: A Paradigm for Catalysis Through the Use of a Binuclear Metal Center
Descriptor: N-CARBAMOYL-L-ASPARTATE, OROTIC ACID, ZINC ION, ...
Authors:Thoden, J.B, Phillips Jr, G.N, Neal, T.M, Raushel, F.M, Holden, H.M.
Deposit date:2001-05-16
Release date:2001-06-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular structure of dihydroorotase: a paradigm for catalysis through the use of a binuclear metal center.
Biochemistry, 40, 2001
2OB3
DownloadVisualize
BU of 2ob3 by Molmil
Structure of Phosphotriesterase mutant H257Y/L303T
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Parathion hydrolase, ZINC ION
Authors:Kim, J, Ramagopal, U.A, Tsai, P, Raushel, F.M, Almo, S.C.
Deposit date:2006-12-18
Release date:2007-01-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Structure of Phosphotriesterase mutant H257Y/L303T
To be Published
2O4M
DownloadVisualize
BU of 2o4m by Molmil
Structure of Phosphotriesterase mutant I106G/F132G/H257Y
Descriptor: ACETIC ACID, CACODYLATE ION, GLYCEROL, ...
Authors:Kim, J, Ramagopal, U.A, Tsai, P, Raushel, F.M, Almo, S.C.
Deposit date:2006-12-04
Release date:2007-12-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of Phosphotriesterase mutant I106G/F132G/H257Y
To be Published
1JGM
DownloadVisualize
BU of 1jgm by Molmil
High Resolution Structure of the Cadmium-containing Phosphotriesterase from Pseudomonas diminuta
Descriptor: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, CADMIUM ION, ...
Authors:Benning, M.M, Shim, H, Raushel, F.M, Holden, H.M.
Deposit date:2001-06-26
Release date:2001-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta.
Biochemistry, 40, 2001
2O4Q
DownloadVisualize
BU of 2o4q by Molmil
Structure of Phosphotriesterase mutant G60A
Descriptor: CACODYLATE ION, Parathion hydrolase, ZINC ION
Authors:Kim, J, Ramagopal, U.A, Tsai, P.C, Raushel, F.M, Almo, S.C.
Deposit date:2006-12-04
Release date:2007-12-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of diethyl phosphate bound to the binuclear metal center of phosphotriesterase.
Biochemistry, 47, 2008
2OQL
DownloadVisualize
BU of 2oql by Molmil
Structure of Phosphotriesterase mutant H254Q/H257F
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Parathion hydrolase, ...
Authors:Kim, J, Tsai, P, Raushel, F.M, Almo, S.C.
Deposit date:2007-01-31
Release date:2008-02-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of PTE mutant H254Q/H257F
To be Published
2P53
DownloadVisualize
BU of 2p53 by Molmil
Crystal structure of N-acetyl-D-glucosamine-6-phosphate deacetylase D273N mutant complexed with N-acetyl phosphonamidate-d-glucosamine-6-phosphate
Descriptor: 2-deoxy-2-{[(S)-hydroxy(methyl)phosphoryl]amino}-6-O-phosphono-alpha-D-glucopyranose, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Hall, R.S, Raushel, F.M, Almo, S.C.
Deposit date:2007-03-14
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Diversity within the Mononuclear and Binuclear Active Sites of N-Acetyl-d-glucosamine-6-phosphate Deacetylase.
Biochemistry, 46, 2007
1KEE
DownloadVisualize
BU of 1kee by Molmil
Inactivation of the Amidotransferase Activity of Carbamoyl Phosphate Synthetase by the Antibiotic Acivicin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Carbamoyl-phosphate synthetase large chain, ...
Authors:Miles, B.W, Thoden, J.B, Holden, H.M, Raushel, F.M.
Deposit date:2001-11-15
Release date:2001-12-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inactivation of the amidotransferase activity of carbamoyl phosphate synthetase by the antibiotic acivicin.
J.Biol.Chem., 277, 2002
2P50
DownloadVisualize
BU of 2p50 by Molmil
Crystal structure of N-acetyl-D-Glucosamine-6-Phosphate deacetylase liganded with Zn
Descriptor: N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Hall, R.S, Raushel, F.M, Almo, S.C.
Deposit date:2007-03-14
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Diversity within the Mononuclear and Binuclear Active Sites of N-Acetyl-d-glucosamine-6-phosphate Deacetylase.
Biochemistry, 46, 2007
2PLM
DownloadVisualize
BU of 2plm by Molmil
Crystal structure of the protein TM0936 from Thermotoga maritima complexed with ZN and S-inosylhomocysteine
Descriptor: (2S)-2-AMINO-4-({[(2S,3S,4R,5R)-3,4-DIHYDROXY-5-(6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)TETRAHYDROFURAN-2-YL]METHYL}THIO)BUTANOIC ACID, Uncharacterized protein, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Hermann, J.C, Marti-Arbona, R, Shoichet, B.K, Raushel, F.M, Almo, S.C.
Deposit date:2007-04-20
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based activity prediction for an enzyme of unknown function
Nature, 448, 2007
1M6V
DownloadVisualize
BU of 1m6v by Molmil
Crystal Structure of the G359F (small subunit) Point Mutant of Carbamoyl Phosphate Synthetase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, L-ornithine, ...
Authors:Thoden, J.B, Huang, X, Raushel, F.M, Holden, H.M.
Deposit date:2002-07-17
Release date:2002-07-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Carbamoyl-phosphate synthetase. Creation of an escape route for ammonia
J.Biol.Chem., 277, 2002
1MN0
DownloadVisualize
BU of 1mn0 by Molmil
Crystal structure of galactose mutarotase from lactococcus lactis complexed with D-xylose
Descriptor: Aldose 1-epimerase, NICKEL (II) ION, alpha-D-xylopyranose
Authors:Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
1MMY
DownloadVisualize
BU of 1mmy by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-quinovose
Descriptor: Aldose 1-epimerase, SODIUM ION, alpha-D-quinovopyranose
Authors:Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
1MMU
DownloadVisualize
BU of 1mmu by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-glucose
Descriptor: Aldose 1-epimerase, SODIUM ION, beta-D-glucopyranose
Authors:Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
1MMX
DownloadVisualize
BU of 1mmx by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-fucose
Descriptor: Aldose 1-epimerase, SODIUM ION, alpha-L-fucopyranose
Authors:Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
3RHG
DownloadVisualize
BU of 3rhg by Molmil
Crystal structure of amidohydrolase pmi1525 (target efi-500319) from proteus mirabilis hi4320
Descriptor: BENZOIC ACID, CACODYLATE ION, Putative phophotriesterase, ...
Authors:Patskovsky, Y, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Raushel, F.M, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-04-11
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Crystal Structure of Amidohydrolase Pmi1525 from Proteus Mirabilis Hi4320
To be Published
3R0D
DownloadVisualize
BU of 3r0d by Molmil
Crystal structure of Cytosine Deaminase from Escherichia Coli complexed with two zinc atoms in the active site
Descriptor: (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol, Cytosine deaminase, GLYCEROL, ...
Authors:Fedorov, A.A, Fedorov, E.V, Kamat, S, Hitchcock, D, Raushel, F.M, Almo, S.C.
Deposit date:2011-03-07
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Crystal structure of Cytosine Deaminase from Escherichia Coli complexed with two zinc atoms in the active site
To be Published

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon